RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 SYCP3Q8IZU3 236 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
GABPA-201ENST00000354828 CAGE1Q8TC20 777 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 C6orf50Q9HD87 102 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 EIF5P55010 431 aaKnown RBP11.2□□□□□ -0.62
GABPA-201ENST00000354828 BRDTQ58F21 947 aaPredicted RBP11.2□□□□□ -0.62
GABPA-201ENST00000354828 CERS3Q8IU89 383 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 NUP62CLQ9H1M0 184 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
GABPA-201ENST00000354828 SPATA31A6Q5VVP1 1343 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 TRAK2O60296 914 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 SCNN1DP51172 638 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 KIF22Q14807 665 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 PARP1P09874 1014 aaKnown RBP11.19□□□□□ -0.62
GABPA-201ENST00000354828 GSE1Q14687 1217 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 STXBP4Q6ZWJ1 553 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 SPATA5Q8NB90 893 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 GPHNQ9NQX3 736 aaPredicted RBP11.19□□□□□ -0.62
GABPA-201ENST00000354828 CROCC2H7BZ55 1655 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 KDM5AP29375 1690 aaKnown RBP11.19□□□□□ -0.62
GABPA-201ENST00000354828 CLTCQ00610 1675 aaKnown RBP11.19□□□□□ -0.62
GABPA-201ENST00000354828 AATKQ6ZMQ8 1374 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 TCP10L2B9ZVM9 353 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 PANK2Q9BZ23 570 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 DCTPP1Q9H773 170 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 RTL9Q8NET4 1388 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 TBCAO75347 108 aaKnown RBP11.19□□□□□ -0.62
GABPA-201ENST00000354828 SSR1P43307 286 aaKnown RBP11.19□□□□□ -0.62
GABPA-201ENST00000354828 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 AMPD3Q01432 767 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 CHST3Q7LGC8 479 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 ZKSCAN3Q9BRR0 538 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 BACH1O14867 736 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 TGFBRAP1Q8WUH2 860 aa11.19□□□□□ -0.62
GABPA-201ENST00000354828 PCCAP05165 728 aaPredicted RBP11.18□□□□□ -0.62
GABPA-201ENST00000354828 GYG1P46976 350 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 CCDC93Q567U6 631 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 DCAF15Q66K64 600 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 CPXCR1Q8N123 301 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 ALG1Q9BT22 464 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 SCAND2PQ9GZW5 306 aaPredicted RBP11.18□□□□□ -0.62
GABPA-201ENST00000354828 TTLL6Q8N841 843 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 CEP152O94986 1710 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 KIDINS220Q9ULH0 1771 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 ALKQ9UM73 1620 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 RLBP1P12271 317 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 CCDC171Q6TFL3 1326 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 PRDM1O75626 825 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 GJB2P29033 226 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 NCBP1Q09161 790 aaKnown RBP11.18□□□□□ -0.62
GABPA-201ENST00000354828 GIGYF2Q6Y7W6 1299 aaKnown RBP11.18□□□□□ -0.62
GABPA-201ENST00000354828 Q6ZUG5 572 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 PIM2Q9P1W9 311 aa11.18□□□□□ -0.62
GABPA-201ENST00000354828 RBM27Q9P2N5 1060 aaKnown RBP11.18□□□□□ -0.62
GABPA-201ENST00000354828 SPHKAPQ2M3C7 1700 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 ESYT1Q9BSJ8 1104 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.17□□□□□ -0.62
GABPA-201ENST00000354828 ZBTB21Q9ULJ3 1066 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 IGSF1Q8N6C5 1336 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 TCHPQ9BT92 498 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 ZBED4O75132 1171 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 CNNM3Q8NE01 707 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 RBM25P49756 843 aaKnown RBP11.17□□□□□ -0.62
GABPA-201ENST00000354828 ERFEQ4G0M1 354 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 TNS3Q68CZ2 1445 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 NECAB1Q8N987 351 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 LRRIQ1Q96JM4 1722 aa11.17□□□□□ -0.62
GABPA-201ENST00000354828 ABT1Q9ULW3 272 aaKnown RBP11.17□□□□□ -0.62
GABPA-201ENST00000354828 CAMSAP1Q5T5Y3 1602 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 BBOX1O75936 387 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 CHRNDQ07001 517 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 NFKBIBQ15653 356 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 CAMK4Q16566 473 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 TXNRD1Q16881 649 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 TCERG1LQ5VWI1 586 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 FCHSD1Q86WN1 690 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 SPON1Q9HCB6 807 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 PKD2L1Q9P0L9 805 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 CCDC181Q5TID7 509 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 OTUD7BQ6GQQ9 843 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 PAGR1Q9BTK6 254 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 DBNDD1Q9H9R9 158 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 AS3MTQ9HBK9 375 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 HELLSQ9NRZ9 838 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 XDHP47989 1333 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 SLC1A4P43007 532 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 CETN1Q12798 172 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 ZNF804BA4D1E1 1349 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 CBFA2T2O43439 604 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 ZAP70P43403 619 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 TMC4Q7Z404 712 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 MNS1Q8NEH6 495 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 ZBTB40Q9NUA8 1239 aa11.16□□□□□ -0.62
GABPA-201ENST00000354828 TFIP11Q9UBB9 837 aaKnown RBP11.16□□□□□ -0.62
GABPA-201ENST00000354828 PTPDC1A2A3K4 754 aa11.15□□□□□ -0.62
GABPA-201ENST00000354828 RPS6KA4O75676 772 aa11.15□□□□□ -0.62
GABPA-201ENST00000354828 RAD17O75943 681 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms