RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 CCDC77Q9BR77 488 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 SH2B1Q9NRF2 756 aaPredicted RBP15.19■□□□□ 0.02
LMBR1-201ENST00000353442 UFL1O94874 794 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 STX17P56962 302 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 KRT79Q5XKE5 535 aa15.19■□□□□ 0.02
LMBR1-201ENST00000353442 PPFIA1Q13136 1202 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 PARD3BQ8TEW8 1205 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 DNAJC21Q5F1R6 531 aaKnown RBP15.18■□□□□ 0.02
LMBR1-201ENST00000353442 VPS52Q8N1B4 723 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 XAGE3Q8WTP9 111 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 STRN3Q13033 797 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 LEO1Q8WVC0 666 aaPredicted RBP15.18■□□□□ 0.02
LMBR1-201ENST00000353442 IFT81Q8WYA0 676 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 GIPC1O14908 333 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 HS2ST1Q7LGA3 356 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 FBLN1P23142 703 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 MAN1A1P33908 653 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 SNW1Q13573 536 aaKnown RBP15.18■□□□□ 0.02
LMBR1-201ENST00000353442 USTQ9Y2C2 406 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 HSPA2P54652 639 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 INF2Q27J81 1249 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 METTL13Q8N6R0 699 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 SPATA17Q96L03 361 aa15.18■□□□□ 0.02
LMBR1-201ENST00000353442 ATAD2Q6PL18 1390 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 NSMCE1Q8WV22 266 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 ATRIPQ8WXE1 791 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 RIOK1Q9BRS2 568 aaKnown RBP15.17■□□□□ 0.02
LMBR1-201ENST00000353442 FNDC3AQ9Y2H6 1198 aaKnown RBP15.17■□□□□ 0.02
LMBR1-201ENST00000353442 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.17■□□□□ 0.02
LMBR1-201ENST00000353442 AKNAQ7Z591 1439 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 UBASH3AP57075 661 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 KANK3Q6NY19 840 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 SESTD1Q86VW0 696 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 MROH2BQ7Z745 1585 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 ATP2A2P16615 1042 aaKnown RBP15.17■□□□□ 0.02
LMBR1-201ENST00000353442 ITKQ08881 620 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 SKA2Q8WVK7 121 aaPredicted RBP15.17■□□□□ 0.02
LMBR1-201ENST00000353442 BRF1Q92994 677 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 CHPF2Q9P2E5 772 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 BSPRYQ5W0U4 402 aa15.17■□□□□ 0.02
LMBR1-201ENST00000353442 RBM27Q9P2N5 1060 aaKnown RBP15.17■□□□□ 0.02
LMBR1-201ENST00000353442 HGSO14964 777 aaPredicted RBP15.16■□□□□ 0.02
LMBR1-201ENST00000353442 COPS6Q7L5N1 327 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 OATP04181 439 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 PRKAG2Q9UGJ0 569 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
LMBR1-201ENST00000353442 KIF9Q9HAQ2 790 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 SSFA2P28290 1259 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 CASC4Q6P4E1 433 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 GADL1Q6ZQY3 521 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 NSRP1Q9H0G5 558 aaKnown RBP15.16■□□□□ 0.02
LMBR1-201ENST00000353442 GOLGA6CA6NDK9 693 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 GOLGA6BA6NDN3 693 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 CTAGE5O15320 804 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 GOLGA6DP0CG33 693 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 DACT3Q96B18 629 aaPredicted RBP15.16■□□□□ 0.02
LMBR1-201ENST00000353442 FAM193BQ96PV7 902 aaPredicted RBP15.16■□□□□ 0.02
LMBR1-201ENST00000353442 ECHDC1Q9NTX5 307 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 GOLGA6AQ9NYA3 693 aa15.16■□□□□ 0.02
LMBR1-201ENST00000353442 PYM1Q9BRP8 204 aaKnown RBP15.16■□□□□ 0.02
LMBR1-201ENST00000353442 WDR46O15213 610 aaKnown RBP15.15■□□□□ 0.02
LMBR1-201ENST00000353442 CYLC1P35663 651 aaPredicted RBP15.15■□□□□ 0.02
LMBR1-201ENST00000353442 RNASE9P60153 205 aaKnown RBP15.15■□□□□ 0.02
LMBR1-201ENST00000353442 PPP4R3BQ5MIZ7 849 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 JAKMIP2Q96AA8 810 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 CDCA7Q9BWT1 371 aaPredicted RBP15.15■□□□□ 0.02
LMBR1-201ENST00000353442 APBA3O96018 575 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 FMNL3Q8IVF7 1028 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 ESYT2A0FGR8 921 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 NEK11Q8NG66 645 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 NBPF3Q9H094 633 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 LMTK3Q96Q04 1460 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 PKNOX2Q96KN3 472 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.15■□□□□ 0.02
LMBR1-201ENST00000353442 FRMD4BQ9Y2L6 1034 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 V9GYY5 206 aaPredicted RBP15.15■□□□□ 0.02
LMBR1-201ENST00000353442 AZI2Q9H6S1 392 aa15.15■□□□□ 0.02
LMBR1-201ENST00000353442 BZW2Q9Y6E2 419 aaKnown RBP15.15■□□□□ 0.02
LMBR1-201ENST00000353442 CCT6AP40227 531 aaKnown RBP15.14■□□□□ 0.02
LMBR1-201ENST00000353442 IFT74Q96LB3 600 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 SPC25Q9HBM1 224 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 LETM2Q2VYF4 491 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 UBXN1Q04323 297 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 MKRN3Q13064 507 aaKnown RBP15.14■□□□□ 0.01
LMBR1-201ENST00000353442 NSMFQ6X4W1 530 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 ABCF3Q9NUQ8 709 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 SPDYE2BA6NHP3 402 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 PARP1P09874 1014 aaKnown RBP15.14■□□□□ 0.01
LMBR1-201ENST00000353442 SPDYE6P0CI01 402 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 KRT2P35908 639 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 CCDC125Q86Z20 511 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 H0YIN7 160 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 LMBR1LQ6UX01 489 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 CADPS2Q86UW7 1296 aa15.14■□□□□ 0.01
LMBR1-201ENST00000353442 PSMA7O14818 248 aa15.13■□□□□ 0.01
LMBR1-201ENST00000353442 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.13■□□□□ 0.01
LMBR1-201ENST00000353442 HSPA4P34932 840 aa15.13■□□□□ 0.01
LMBR1-201ENST00000353442 PRPHP41219 470 aa15.13■□□□□ 0.01
LMBR1-201ENST00000353442 SF3A3Q12874 501 aaKnown RBP eCLIP15.13■□□□□ 0.016e-6■□□□□ 10.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms