RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 A0A1W2PQ27 194 aa17.3■□□□□ 0.36
TRAF3-202ENST00000351691 A0A1W2PQ64 194 aa17.3■□□□□ 0.36
TRAF3-202ENST00000351691 A0A1W2PQD8 194 aa17.3■□□□□ 0.36
TRAF3-202ENST00000351691 TATP17735 454 aaPredicted RBP17.3■□□□□ 0.36
TRAF3-202ENST00000351691 EVCP57679 992 aa17.3■□□□□ 0.36
TRAF3-202ENST00000351691 NEXNQ0ZGT2 675 aa17.3■□□□□ 0.36
TRAF3-202ENST00000351691 CWF19L2Q2TBE0 894 aaKnown RBP17.3■□□□□ 0.36
TRAF3-202ENST00000351691 NOM1Q5C9Z4 860 aaKnown RBP17.3■□□□□ 0.36
TRAF3-202ENST00000351691 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
TRAF3-202ENST00000351691 AACSQ86V21 672 aa17.3■□□□□ 0.36
TRAF3-202ENST00000351691 DDX54Q8TDD1 881 aaKnown RBP17.3■□□□□ 0.36
TRAF3-202ENST00000351691 IFNKQ9P0W0 207 aa17.3■□□□□ 0.36
TRAF3-202ENST00000351691 MRC1P22897 1456 aa17.3■□□□□ 0.36
TRAF3-202ENST00000351691 GOLGA6L9A6NEM1 432 aa17.29■□□□□ 0.36
TRAF3-202ENST00000351691 ZSCAN12O43309 604 aa17.29■□□□□ 0.36
TRAF3-202ENST00000351691 JAK2O60674 1132 aa17.29■□□□□ 0.36
TRAF3-202ENST00000351691 ACTN2P35609 894 aa17.29■□□□□ 0.36
TRAF3-202ENST00000351691 RSRC2Q7L4I2 434 aaKnown RBP17.29■□□□□ 0.36
TRAF3-202ENST00000351691 FMR1NBQ8N0W7 255 aaPredicted RBP17.29■□□□□ 0.36
TRAF3-202ENST00000351691 RABGGTAQ92696 567 aa17.29■□□□□ 0.36
TRAF3-202ENST00000351691 CARD6Q9BX69 1037 aa17.29■□□□□ 0.36
TRAF3-202ENST00000351691 SEC31AO94979 1220 aaKnown RBP17.29■□□□□ 0.36
TRAF3-202ENST00000351691 SMC2O95347 1197 aa17.29■□□□□ 0.36
TRAF3-202ENST00000351691 FSIP1Q8NA03 581 aa17.29■□□□□ 0.36
TRAF3-202ENST00000351691 KAZALD1Q96I82 304 aa17.29■□□□□ 0.36
TRAF3-202ENST00000351691 RRP15Q9Y3B9 282 aaKnown RBP17.29■□□□□ 0.36
TRAF3-202ENST00000351691 COL15A1P39059 1388 aa17.29■□□□□ 0.36
TRAF3-202ENST00000351691 IKBKBO14920 756 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 URI1O94763 535 aaPredicted RBP17.28■□□□□ 0.36
TRAF3-202ENST00000351691 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 FAM227BQ96M60 508 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 FUT8Q9BYC5 575 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 KIAA1468Q9P260 1216 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 ADAM21Q9UKJ8 722 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 PA2G4Q9UQ80 394 aaKnown RBP17.28■□□□□ 0.36
TRAF3-202ENST00000351691 C5P01031 1676 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 KDM6AO15550 1401 aaPredicted RBP17.28■□□□□ 0.36
TRAF3-202ENST00000351691 MYO1BO43795 1136 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 SASH1O94885 1247 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 MAPK8IP2Q13387 824 aaPredicted RBP17.28■□□□□ 0.36
TRAF3-202ENST00000351691 GORABQ5T7V8 394 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 ICE2Q659A1 982 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 MRPS27Q92552 414 aaKnown RBP17.28■□□□□ 0.36
TRAF3-202ENST00000351691 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
TRAF3-202ENST00000351691 COL18A1P39060 1754 aa17.28■□□□□ 0.36
TRAF3-202ENST00000351691 PRAMEF22A3QJZ6 481 aa17.27■□□□□ 0.36
TRAF3-202ENST00000351691 PHKG2P15735 406 aa17.27■□□□□ 0.36
TRAF3-202ENST00000351691 STK3Q13188 491 aa17.27■□□□□ 0.36
TRAF3-202ENST00000351691 BRD3Q15059 726 aa17.27■□□□□ 0.36
TRAF3-202ENST00000351691 C10orf67Q8IYJ2 551 aa17.27■□□□□ 0.36
TRAF3-202ENST00000351691 METTL22Q9BUU2 404 aaPredicted RBP17.27■□□□□ 0.36
TRAF3-202ENST00000351691 MAP2K7O14733 419 aa17.27■□□□□ 0.35
TRAF3-202ENST00000351691 CBFA2T2O43439 604 aa17.27■□□□□ 0.35
TRAF3-202ENST00000351691 NLRP12P59046 1061 aa17.27■□□□□ 0.35
TRAF3-202ENST00000351691 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.35
TRAF3-202ENST00000351691 RGS22Q8NE09 1264 aa17.27■□□□□ 0.35
TRAF3-202ENST00000351691 A0A1B0GUL7 405 aa17.26■□□□□ 0.35
TRAF3-202ENST00000351691 CCDC151A5D8V7 595 aa17.26■□□□□ 0.35
TRAF3-202ENST00000351691 NEURL1BA8MQ27 555 aa17.26■□□□□ 0.35
TRAF3-202ENST00000351691 PFKFB2O60825 505 aa17.26■□□□□ 0.35
TRAF3-202ENST00000351691 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
TRAF3-202ENST00000351691 COL9A3Q14050 684 aaPredicted RBP17.26■□□□□ 0.35
TRAF3-202ENST00000351691 ZRSR1Q15695 479 aaKnown RBP17.26■□□□□ 0.35
TRAF3-202ENST00000351691 ADALQ6DHV7 355 aa17.26■□□□□ 0.35
TRAF3-202ENST00000351691 HNRNPLLQ8WVV9 542 aaKnown RBP17.26■□□□□ 0.35
TRAF3-202ENST00000351691 ZCCHC17Q9NP64 241 aaKnown RBP17.26■□□□□ 0.35
TRAF3-202ENST00000351691 LCMT1Q9UIC8 334 aa17.26■□□□□ 0.35
TRAF3-202ENST00000351691 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
TRAF3-202ENST00000351691 USP28Q96RU2 1077 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 TRIM66O15016 1216 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 MAGEA9P43362 315 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 GCKRQ14397 625 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 NCAPHQ15003 741 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 LEKR1Q6ZMV7 388 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 BRINP3Q76B58 766 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 TCEANC2Q96MN5 208 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 NEK1Q96PY6 1258 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 SDF4Q9BRK5 362 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 MRFAP1Q9Y605 127 aa17.25■□□□□ 0.35
TRAF3-202ENST00000351691 A0A0D9SFI3 127 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
TRAF3-202ENST00000351691 CHRM1P11229 460 aaPredicted RBP17.24■□□□□ 0.35
TRAF3-202ENST00000351691 GTF2A1P52655 376 aaPredicted RBP17.24■□□□□ 0.35
TRAF3-202ENST00000351691 TUBB4BP68371 445 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 FANCCQ00597 558 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 AIMP1Q12904 312 aaKnown RBP17.24■□□□□ 0.35
TRAF3-202ENST00000351691 RFX7Q2KHR2 1363 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 TEX2Q8IWB9 1127 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 DDX11Q96FC9 970 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 NSUN7Q8NE18 718 aaKnown RBP17.24■□□□□ 0.35
TRAF3-202ENST00000351691 XAGE3Q8WTP9 111 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 GOLGA1Q92805 767 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
TRAF3-202ENST00000351691 PARD6BQ9BYG5 372 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms