RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 PRDM11Q9NQV5 511 aa28.29■■■□□ 2.12
PTPA-202ENST00000347048 IL2RBP14784 551 aa28.28■■■□□ 2.12
PTPA-202ENST00000347048 ADALQ6DHV7 355 aa28.28■■■□□ 2.12
PTPA-202ENST00000347048 TTLL5Q6EMB2 1281 aa28.28■■■□□ 2.12
PTPA-202ENST00000347048 C11orf57Q6ZUT1 292 aaPredicted RBP28.28■■■□□ 2.12
PTPA-202ENST00000347048 MRPS27Q92552 414 aaKnown RBP28.28■■■□□ 2.12
PTPA-202ENST00000347048 FTOQ9C0B1 505 aaKnown RBP eCLIP28.28■■■□□ 2.12
PTPA-202ENST00000347048 DDX60Q8IY21 1712 aaKnown RBP28.28■■■□□ 2.12
PTPA-202ENST00000347048 SHANK3Q9BYB0 1731 aa28.28■■■□□ 2.12
PTPA-202ENST00000347048 PCCAP05165 728 aaPredicted RBP28.28■■■□□ 2.12
PTPA-202ENST00000347048 FDPSP14324 419 aaKnown RBP28.28■■■□□ 2.12
PTPA-202ENST00000347048 ZNF710Q8N1W2 664 aa28.28■■■□□ 2.12
PTPA-202ENST00000347048 NRBP1Q9UHY1 535 aa28.28■■■□□ 2.12
PTPA-202ENST00000347048 WASHC4Q2M389 1173 aa28.27■■■□□ 2.12
PTPA-202ENST00000347048 CCDC94Q9BW85 323 aaPredicted RBP28.27■■■□□ 2.12
PTPA-202ENST00000347048 NAT10Q9H0A0 1025 aaKnown RBP28.27■■■□□ 2.12
PTPA-202ENST00000347048 UBAP1LF5GYI3 381 aa28.26■■■□□ 2.11
PTPA-202ENST00000347048 CHST3Q7LGC8 479 aa28.26■■■□□ 2.11
PTPA-202ENST00000347048 MB21D2Q8IYB1 491 aaPredicted RBP28.26■■■□□ 2.11
PTPA-202ENST00000347048 CEP57L1Q8IYX8 460 aa28.26■■■□□ 2.11
PTPA-202ENST00000347048 CARD10Q9BWT7 1032 aa28.26■■■□□ 2.11
PTPA-202ENST00000347048 BECN2A8MW95 431 aa28.26■■■□□ 2.11
PTPA-202ENST00000347048 RIOK3O14730 519 aaKnown RBP28.26■■■□□ 2.11
PTPA-202ENST00000347048 YEATS4O95619 227 aa28.26■■■□□ 2.11
PTPA-202ENST00000347048 PIP4K2BP78356 416 aa28.26■■■□□ 2.11
PTPA-202ENST00000347048 LRMPQ12912 555 aa28.26■■■□□ 2.11
PTPA-202ENST00000347048 BRAPQ7Z569 592 aa28.26■■■□□ 2.11
PTPA-202ENST00000347048 NCOA7Q8NI08 942 aa28.26■■■□□ 2.11
PTPA-202ENST00000347048 TEX13AQ9BXU3 409 aaPredicted RBP28.26■■■□□ 2.11
PTPA-202ENST00000347048 FOXP2O15409 715 aa28.25■■■□□ 2.11
PTPA-202ENST00000347048 CSF1RP07333 972 aa28.25■■■□□ 2.11
PTPA-202ENST00000347048 KCNG4Q8TDN1 519 aa28.25■■■□□ 2.11
PTPA-202ENST00000347048 CTIFO43310 598 aaKnown RBP28.24■■■□□ 2.11
PTPA-202ENST00000347048 PRC1O43663 620 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 FMR1NBQ8N0W7 255 aaPredicted RBP28.24■■■□□ 2.11
PTPA-202ENST00000347048 C8orf76Q96K31 380 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 POLR3EQ9NVU0 708 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 PCDHA7Q9UN72 937 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 MYH7P12883 1935 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 TOM1O60784 492 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 FGAP02671 866 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 ADORA1P30542 326 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 GUCY1B3Q02153 619 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 TAF7LQ5H9L4 462 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 KIF6Q6ZMV9 814 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 BCL2L12Q9HB09 334 aa28.24■■■□□ 2.11
PTPA-202ENST00000347048 ZBTB38Q8NAP3 1195 aaPredicted RBP28.23■■■□□ 2.11
PTPA-202ENST00000347048 CACTINQ8WUQ7 758 aaKnown RBP28.23■■■□□ 2.11
PTPA-202ENST00000347048 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.23■■■□□ 2.114e-6■■■□□ 18.8
PTPA-202ENST00000347048 IFIT5Q13325 482 aaKnown RBP28.22■■■□□ 2.11
PTPA-202ENST00000347048 RALYLQ86SE5 291 aaKnown RBP28.22■■■□□ 2.11
PTPA-202ENST00000347048 DHX40Q8IX18 779 aaKnown RBP28.22■■■□□ 2.11
PTPA-202ENST00000347048 LINC00301Q8NCQ3 95 aa28.22■■■□□ 2.11
PTPA-202ENST00000347048 FBXO18Q8NFZ0 1043 aa28.22■■■□□ 2.11
PTPA-202ENST00000347048 KLF18A0A0U1RQI7 1052 aa28.22■■■□□ 2.11
PTPA-202ENST00000347048 SMTNL1A8MU46 457 aa28.22■■■□□ 2.11
PTPA-202ENST00000347048 CDHR2Q9BYE9 1310 aa28.22■■■□□ 2.11
PTPA-202ENST00000347048 STK38Q15208 465 aa28.21■■■□□ 2.11
PTPA-202ENST00000347048 SYCP1Q15431 976 aa28.21■■■□□ 2.11
PTPA-202ENST00000347048 CCDC144BQ3MJ40 725 aa28.21■■■□□ 2.11
PTPA-202ENST00000347048 CCDC144CPQ8IYA2 1237 aa28.21■■■□□ 2.11
PTPA-202ENST00000347048 ZNF512BQ96KM6 892 aaPredicted RBP28.21■■■□□ 2.11
PTPA-202ENST00000347048 PAXBP1Q9Y5B6 917 aa28.21■■■□□ 2.11
PTPA-202ENST00000347048 GOLGA8BA8MQT2 603 aa28.2■■■□□ 2.11
PTPA-202ENST00000347048 ZNF213O14771 459 aa28.2■■■□□ 2.11
PTPA-202ENST00000347048 RBM6P78332 1123 aaKnown RBP28.2■■■□□ 2.11
PTPA-202ENST00000347048 LRRC8AQ8IWT6 810 aa28.2■■■□□ 2.11
PTPA-202ENST00000347048 ORC3Q9UBD5 711 aaPredicted RBP28.2■■■□□ 2.11
PTPA-202ENST00000347048 HPS5Q9UPZ3 1129 aa28.2■■■□□ 2.11
PTPA-202ENST00000347048 ROBO1Q9Y6N7 1651 aa28.2■■■□□ 2.11
PTPA-202ENST00000347048 ZAP70P43403 619 aa28.2■■■□□ 2.1
PTPA-202ENST00000347048 SF3A1Q15459 793 aaKnown RBP28.2■■■□□ 2.1
PTPA-202ENST00000347048 ATRNO75882 1429 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 RIC1Q4ADV7 1423 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 HAND2P61296 217 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 TSC1Q92574 1164 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 BPIFA3Q9BQP9 254 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 TOGARAM1Q9Y4F4 1720 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 CPLX1O14810 134 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 ATP2B3Q16720 1220 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 ANKRD7Q92527 254 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 SDF4Q9BRK5 362 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 PUS7LQ9H0K6 701 aaKnown RBP28.19■■■□□ 2.1
PTPA-202ENST00000347048 TMOD3Q9NYL9 352 aa28.19■■■□□ 2.1
PTPA-202ENST00000347048 GPAA1O43292 621 aa28.18■■■□□ 2.1
PTPA-202ENST00000347048 ANTXR2P58335 489 aa28.18■■■□□ 2.1
PTPA-202ENST00000347048 SCARF1Q14162 830 aa28.18■■■□□ 2.1
PTPA-202ENST00000347048 MYSM1Q5VVJ2 828 aa28.18■■■□□ 2.1
PTPA-202ENST00000347048 GPHNQ9NQX3 736 aaPredicted RBP28.18■■■□□ 2.1
PTPA-202ENST00000347048 TNNT1P13805 278 aa28.17■■■□□ 2.1
PTPA-202ENST00000347048 TTF1Q15361 905 aaPredicted RBP28.17■■■□□ 2.1
PTPA-202ENST00000347048 C4AP0C0L4 1744 aa28.17■■■□□ 2.1
PTPA-202ENST00000347048 C4BP0C0L5 1744 aa28.17■■■□□ 2.1
PTPA-202ENST00000347048 SPTLC2O15270 562 aa28.17■■■□□ 2.1
PTPA-202ENST00000347048 ZMYND15Q9H091 742 aa28.17■■■□□ 2.1
PTPA-202ENST00000347048 ZRSR1Q15695 479 aaKnown RBP28.16■■■□□ 2.1
PTPA-202ENST00000347048 TPD52L1Q16890 204 aaPredicted RBP28.16■■■□□ 2.1
PTPA-202ENST00000347048 C16orf45Q96MC5 204 aaPredicted RBP28.16■■■□□ 2.1
PTPA-202ENST00000347048 KIAA1468Q9P260 1216 aa28.16■■■□□ 2.1
PTPA-202ENST00000347048 RIPOR2Q9Y4F9 1068 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms