RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 GLI3P10071 1580 aa22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 SNAP23O00161 211 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 ATP2B3Q16720 1220 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 TDRD7Q8NHU6 1098 aaKnown RBP22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 AIFM3Q96NN9 605 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 ISCA1Q9BUE6 129 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 PCDHA7Q9UN72 937 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 BIN1O00499 593 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 CIAO1O76071 339 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 ITGA6P23229 1130 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 ISM2Q6H9L7 571 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 ORC3Q9UBD5 711 aaPredicted RBP22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 AKAP2Q9Y2D5 859 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 LAMA4Q16363 1823 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 RIOK3O14730 519 aaKnown RBP22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 ZNF213O14771 459 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 CHAF1AQ13111 956 aaPredicted RBP22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 ZSCAN25Q6NSZ9 544 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 PLA2G4DQ86XP0 818 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 PIGBQ92521 554 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 PRIMPOLQ96LW4 560 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 AGXT2Q9BYV1 514 aa22.36■■□□□ 1.17
LYSMD4-202ENST00000344791 MCAMP43121 646 aa22.35■■□□□ 1.17
LYSMD4-202ENST00000344791 STK38Q15208 465 aa22.35■■□□□ 1.17
LYSMD4-202ENST00000344791 SLC9C2Q5TAH2 1124 aa22.35■■□□□ 1.17
LYSMD4-202ENST00000344791 CACTINQ8WUQ7 758 aaKnown RBP22.35■■□□□ 1.17
LYSMD4-202ENST00000344791 ZNF274Q96GC6 653 aaPredicted RBP22.35■■□□□ 1.17
LYSMD4-202ENST00000344791 INCENPQ9NQS7 918 aa22.35■■□□□ 1.17
LYSMD4-202ENST00000344791 CPDO75976 1380 aa22.35■■□□□ 1.17
LYSMD4-202ENST00000344791 SALL1Q9NSC2 1324 aa22.35■■□□□ 1.17
LYSMD4-202ENST00000344791 STRCP1A6NGW2 1772 aa22.34■■□□□ 1.17
LYSMD4-202ENST00000344791 ZNF592Q92610 1267 aa22.34■■□□□ 1.17
LYSMD4-202ENST00000344791 ANTXR2P58335 489 aa22.34■■□□□ 1.17
LYSMD4-202ENST00000344791 AOPEPQ8N6M6 819 aa22.34■■□□□ 1.17
LYSMD4-202ENST00000344791 NDUFA8P51970 172 aa22.33■■□□□ 1.17
LYSMD4-202ENST00000344791 STX1AQ16623 288 aa22.33■■□□□ 1.17
LYSMD4-202ENST00000344791 ZNF710Q8N1W2 664 aa22.33■■□□□ 1.17
LYSMD4-202ENST00000344791 CTNNA3Q9UI47 895 aa22.33■■□□□ 1.17
LYSMD4-202ENST00000344791 TBC1D2BQ9UPU7 963 aa22.33■■□□□ 1.17
LYSMD4-202ENST00000344791 TPM3P06753 285 aa22.33■■□□□ 1.17
LYSMD4-202ENST00000344791 FAM160A1Q05DH4 1040 aa22.33■■□□□ 1.17
LYSMD4-202ENST00000344791 IQCB1Q15051 598 aa22.33■■□□□ 1.17
LYSMD4-202ENST00000344791 APPBP2Q92624 585 aa22.33■■□□□ 1.17
LYSMD4-202ENST00000344791 PKD1L3Q7Z443 1732 aa22.33■■□□□ 1.16
LYSMD4-202ENST00000344791 MARCKSP29966 332 aaPredicted RBP22.32■■□□□ 1.16
LYSMD4-202ENST00000344791 KCPQ6ZWJ8 1503 aa22.32■■□□□ 1.16
LYSMD4-202ENST00000344791 NCOA7Q8NI08 942 aa22.32■■□□□ 1.16
LYSMD4-202ENST00000344791 MYL10Q9BUA6 226 aa22.32■■□□□ 1.16
LYSMD4-202ENST00000344791 CARD10Q9BWT7 1032 aa22.32■■□□□ 1.16
LYSMD4-202ENST00000344791 TRMT112Q9UI30 125 aaKnown RBP22.32■■□□□ 1.16
LYSMD4-202ENST00000344791 HPS5Q9UPZ3 1129 aa22.32■■□□□ 1.16
LYSMD4-202ENST00000344791 COL5A2P05997 1499 aaPredicted RBP22.31■■□□□ 1.16
LYSMD4-202ENST00000344791 KIF28PB7ZC32 967 aa22.31■■□□□ 1.16
LYSMD4-202ENST00000344791 MICU3Q86XE3 530 aa22.31■■□□□ 1.16
LYSMD4-202ENST00000344791 ZBTB38Q8NAP3 1195 aaPredicted RBP22.31■■□□□ 1.16
LYSMD4-202ENST00000344791 PHKBQ93100 1093 aa22.31■■□□□ 1.16
LYSMD4-202ENST00000344791 BCL2L12Q9HB09 334 aa22.31■■□□□ 1.16
LYSMD4-202ENST00000344791 SENP2Q9HC62 589 aa22.31■■□□□ 1.16
LYSMD4-202ENST00000344791 ATG3Q9NT62 314 aa22.31■■□□□ 1.16
LYSMD4-202ENST00000344791 MRPS27Q92552 414 aaKnown RBP22.31■■□□□ 1.16
LYSMD4-202ENST00000344791 TJP1Q07157 1748 aa22.3■■□□□ 1.16
LYSMD4-202ENST00000344791 PCCAP05165 728 aaPredicted RBP22.3■■□□□ 1.16
LYSMD4-202ENST00000344791 LRRFIP1Q32MZ4 808 aaKnown RBP22.3■■□□□ 1.16
LYSMD4-202ENST00000344791 MB21D2Q8IYB1 491 aaPredicted RBP22.3■■□□□ 1.16
LYSMD4-202ENST00000344791 ENGASEQ8NFI3 743 aa22.3■■□□□ 1.16
LYSMD4-202ENST00000344791 SLAIN2Q9P270 581 aa22.3■■□□□ 1.16
LYSMD4-202ENST00000344791 ZRSR1Q15695 479 aaKnown RBP22.3■■□□□ 1.16
LYSMD4-202ENST00000344791 UBE2Q2LH0YL09 131 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 PHKA1P46020 1223 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 TRDNQ13061 729 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 TPD52L1Q16890 204 aaPredicted RBP22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 TTLL11Q8NHH1 800 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 ZMYND15Q9H091 742 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 PIH1D3Q9NQM4 214 aaKnown RBP22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 LAMB4A4D0S4 1761 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 B4E1Z4 1266 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 STARD3NLO95772 234 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 SYNE3Q6ZMZ3 975 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 TBC1D10CQ8IV04 446 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 PRDM10Q9NQV6 1147 aa22.29■■□□□ 1.16
LYSMD4-202ENST00000344791 IRS4O14654 1257 aaPredicted RBP22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 ZFYP08048 801 aaPredicted RBP22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 NKX1-1Q15270 411 aaPredicted RBP22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 LINC00301Q8NCQ3 95 aa22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 TRMT1Q9NXH9 659 aaKnown RBP22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 ZBTB1Q9Y2K1 713 aa22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 NLRP10Q86W26 655 aa22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 DHX40Q8IX18 779 aaKnown RBP22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 FBXO18Q8NFZ0 1043 aa22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 GNL2Q13823 731 aaKnown RBP22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 DPCR1Q3MIW9 517 aa22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 CYB5R4Q7L1T6 521 aa22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 BTG4Q9NY30 223 aa22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 WWC3Q9ULE0 1092 aa22.28■■□□□ 1.16
LYSMD4-202ENST00000344791 ZNF532Q9HCE3 1301 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 USP27XA6NNY8 438 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 TNNT1P13805 278 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 MYSM1Q5VVJ2 828 aa22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 GIGYF2Q6Y7W6 1299 aaKnown RBP22.27■■□□□ 1.16
LYSMD4-202ENST00000344791 MAP7D2Q96T17 732 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms