RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 HMGB1P09429 215 aaKnown RBP15.54■□□□□ 0.08
SNX21-202ENST00000344780 AOPEPQ8N6M6 819 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 XAGE2Q96GT9 111 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 SLAIN2Q9P270 581 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 SLIT3O75094 1523 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 MAST3O60307 1309 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 PDIA3P30101 505 aaKnown RBP15.54■□□□□ 0.08
SNX21-202ENST00000344780 ZNF396Q96N95 335 aaPredicted RBP15.54■□□□□ 0.08
SNX21-202ENST00000344780 PCDH11XQ9BZA7 1347 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 PCDH11YQ9BZA8 1340 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 RNF113AO15541 343 aaKnown RBP15.54■□□□□ 0.08
SNX21-202ENST00000344780 IDH1O75874 414 aaKnown RBP15.54■□□□□ 0.08
SNX21-202ENST00000344780 IL15P40933 162 aaPredicted RBP15.54■□□□□ 0.08
SNX21-202ENST00000344780 METTL24Q5JXM2 366 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 CCDC158Q5M9N0 1113 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 CNNM1Q9NRU3 951 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 BTG4Q9NY30 223 aa15.54■□□□□ 0.08
SNX21-202ENST00000344780 KLF18A0A0U1RQI7 1052 aa15.53■□□□□ 0.08
SNX21-202ENST00000344780 INCENPQ9NQS7 918 aa15.53■□□□□ 0.08
SNX21-202ENST00000344780 GOLGA8BA8MQT2 603 aa15.53■□□□□ 0.08
SNX21-202ENST00000344780 LDHAL6AQ6ZMR3 332 aa15.53■□□□□ 0.08
SNX21-202ENST00000344780 RALYLQ86SE5 291 aaKnown RBP15.53■□□□□ 0.08
SNX21-202ENST00000344780 PIGBQ92521 554 aa15.53■□□□□ 0.08
SNX21-202ENST00000344780 WDR17Q8IZU2 1322 aa15.53■□□□□ 0.08
SNX21-202ENST00000344780 GNL2Q13823 731 aaKnown RBP15.52■□□□□ 0.08
SNX21-202ENST00000344780 C8orf76Q96K31 380 aa15.52■□□□□ 0.08
SNX21-202ENST00000344780 C5P01031 1676 aa15.52■□□□□ 0.08
SNX21-202ENST00000344780 STX1AQ16623 288 aa15.52■□□□□ 0.08
SNX21-202ENST00000344780 ZMYM1Q5SVZ6 1142 aa15.52■□□□□ 0.08
SNX21-202ENST00000344780 TDRD7Q8NHU6 1098 aaKnown RBP15.52■□□□□ 0.08
SNX21-202ENST00000344780 PUS7LQ9H0K6 701 aaKnown RBP15.52■□□□□ 0.08
SNX21-202ENST00000344780 ALDH8A1Q9H2A2 487 aaPredicted RBP15.52■□□□□ 0.08
SNX21-202ENST00000344780 ORC3Q9UBD5 711 aaPredicted RBP15.52■□□□□ 0.08
SNX21-202ENST00000344780 SMC2O95347 1197 aa15.52■□□□□ 0.07
SNX21-202ENST00000344780 MARCKSP29966 332 aaPredicted RBP15.52■□□□□ 0.07
SNX21-202ENST00000344780 IFIT5Q13325 482 aaKnown RBP15.52■□□□□ 0.07
SNX21-202ENST00000344780 KIF6Q6ZMV9 814 aa15.52■□□□□ 0.07
SNX21-202ENST00000344780 SYNE3Q6ZMZ3 975 aa15.52■□□□□ 0.07
SNX21-202ENST00000344780 ACSBG1Q96GR2 724 aa15.52■□□□□ 0.07
SNX21-202ENST00000344780 GREM2Q9H772 168 aa15.52■□□□□ 0.07
SNX21-202ENST00000344780 HELLSQ9NRZ9 838 aa15.52■□□□□ 0.07
SNX21-202ENST00000344780 N4BP2Q86UW6 1770 aaPredicted RBP15.52■□□□□ 0.07
SNX21-202ENST00000344780 PCDHA7Q9UN72 937 aa15.51■□□□□ 0.07
SNX21-202ENST00000344780 IQSEC3Q9UPP2 1182 aaPredicted RBP15.51■□□□□ 0.07
SNX21-202ENST00000344780 CLIC4Q9Y696 253 aa15.51■□□□□ 0.07
SNX21-202ENST00000344780 TNS3Q68CZ2 1445 aa15.51■□□□□ 0.07
SNX21-202ENST00000344780 PRC1O43663 620 aa15.51■□□□□ 0.07
SNX21-202ENST00000344780 SKILP12757 684 aa15.51■□□□□ 0.07
SNX21-202ENST00000344780 ADD1P35611 737 aaKnown RBP15.51■□□□□ 0.07
SNX21-202ENST00000344780 IMMTQ16891 758 aaKnown RBP15.51■□□□□ 0.07
SNX21-202ENST00000344780 PLA2G4DQ86XP0 818 aa15.51■□□□□ 0.07
SNX21-202ENST00000344780 CCDC191Q8NCU4 936 aa15.51■□□□□ 0.07
SNX21-202ENST00000344780 FGAP02671 866 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 CCDC112Q8NEF3 446 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 SMARCC2Q8TAQ2 1214 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 DSCC1Q9BVC3 393 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 TRMT112Q9UI30 125 aaKnown RBP15.5■□□□□ 0.07
SNX21-202ENST00000344780 RCOR1Q9UKL0 485 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 USP27XA6NNY8 438 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 TCIRG1Q13488 830 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 CEP57L1Q8IYX8 460 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 CCDC82Q8N4S0 544 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 TOMM22Q9NS69 142 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 CAPN2P17655 700 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 NDUFA8P51970 172 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 FAM160A1Q05DH4 1040 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 AIFM3Q96NN9 605 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 LLPHQ9BRT6 129 aaKnown RBP15.5■□□□□ 0.07
SNX21-202ENST00000344780 ANO10Q9NW15 660 aa15.5■□□□□ 0.07
SNX21-202ENST00000344780 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
SNX21-202ENST00000344780 EXOSC10Q01780 885 aaKnown RBP15.49■□□□□ 0.07
SNX21-202ENST00000344780 NAA16Q6N069 864 aaPredicted RBP15.49■□□□□ 0.07
SNX21-202ENST00000344780 ITGA6P23229 1130 aa15.49■□□□□ 0.07
SNX21-202ENST00000344780 IQCB1Q15051 598 aa15.49■□□□□ 0.07
SNX21-202ENST00000344780 MRPS27Q92552 414 aaKnown RBP15.49■□□□□ 0.07
SNX21-202ENST00000344780 CCDC69A6NI79 296 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 ZNF213O14771 459 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 ADAMTS2O95450 1211 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 FDPSP14324 419 aaKnown RBP15.48■□□□□ 0.07
SNX21-202ENST00000344780 SNW1Q13573 536 aaKnown RBP15.48■□□□□ 0.07
SNX21-202ENST00000344780 PTPN21Q16825 1174 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 SMIM5Q71RC9 77 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 NKX2-3Q8TAU0 364 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 MYL10Q9BUA6 226 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 ZBTB1Q9Y2K1 713 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 CARMIL3Q8ND23 1372 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 HSP90AA4PQ58FG1 418 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 EP400NLQ6ZTU2 488 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 KCNQ4P56696 695 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 TRDNQ13061 729 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 SLC9C2Q5TAH2 1124 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 LRRC8AQ8IWT6 810 aa15.48■□□□□ 0.07
SNX21-202ENST00000344780 CTAGE5O15320 804 aa15.47■□□□□ 0.07
SNX21-202ENST00000344780 GTF2F1P35269 517 aaKnown RBP eCLIP15.47■□□□□ 0.07
SNX21-202ENST00000344780 CEP135Q66GS9 1140 aa15.47■□□□□ 0.07
SNX21-202ENST00000344780 RBM43Q6ZSC3 357 aaKnown RBP15.47■□□□□ 0.07
SNX21-202ENST00000344780 ILDR1Q86SU0 546 aaPredicted RBP15.47■□□□□ 0.07
SNX21-202ENST00000344780 MICU3Q86XE3 530 aa15.47■□□□□ 0.07
SNX21-202ENST00000344780 TIGD1Q96MW7 591 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms