RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 GOLIM4O00461 696 aa11.71□□□□□ -0.53
CLDN18-202ENST00000343735 PKP1Q13835 747 aa11.71□□□□□ -0.53
CLDN18-202ENST00000343735 PRPF40BQ6NWY9 871 aaKnown RBP11.71□□□□□ -0.53
CLDN18-202ENST00000343735 FAM84BQ96KN1 310 aaPredicted RBP11.71□□□□□ -0.53
CLDN18-202ENST00000343735 RAD50Q92878 1312 aa11.71□□□□□ -0.53
CLDN18-202ENST00000343735 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.54
CLDN18-202ENST00000343735 BCAMP50895 628 aa11.71□□□□□ -0.54
CLDN18-202ENST00000343735 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 CHRNA5P30532 468 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 FOSBP53539 338 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 ILDR2Q71H61 639 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 TBC1D16Q8TBP0 767 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 PIM2Q9P1W9 311 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 SRCAPQ6ZRS2 3230 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 MED23Q9ULK4 1368 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 MCAMP43121 646 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 WASHC4Q2M389 1173 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 KIAA1211Q6ZU35 1233 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 ZGPATQ8N5A5 531 aaKnown RBP11.7□□□□□ -0.54
CLDN18-202ENST00000343735 TCEANC2Q96MN5 208 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 TAF1P21675 1872 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 COL4A1P02462 1669 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 LRRC37AA6NMS7 1700 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 SGIP1Q9BQI5 828 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 ESYT1Q9BSJ8 1104 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 ZC3H12CQ9C0D7 883 aaKnown RBP11.7□□□□□ -0.54
CLDN18-202ENST00000343735 A0A1B0GUL6 1792 aa11.7□□□□□ -0.54
CLDN18-202ENST00000343735 KDM4AO75164 1064 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 ZAP70P43403 619 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 GYG1P46976 350 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 HMG20BQ9P0W2 317 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 COL11A2P13942 1736 aaPredicted RBP11.69□□□□□ -0.54
CLDN18-202ENST00000343735 KIF13BQ9NQT8 1826 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 DPEP1P16444 411 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 MAP3K12Q12852 859 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 GLIPR1L2Q4G1C9 344 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 HELLSQ9NRZ9 838 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 SNAP23O00161 211 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 RASGRF1Q13972 1273 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 SPTY2D1Q68D10 685 aaPredicted RBP11.69□□□□□ -0.54
CLDN18-202ENST00000343735 VPS33BQ9H267 617 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 GDPD2Q9HCC8 539 aa11.69□□□□□ -0.54
CLDN18-202ENST00000343735 AK9Q5TCS8 1911 aa11.68□□□□□ -0.54
CLDN18-202ENST00000343735 G3V3G9 751 aa11.68□□□□□ -0.54
CLDN18-202ENST00000343735 RNF113AO15541 343 aaKnown RBP11.68□□□□□ -0.54
CLDN18-202ENST00000343735 MCCP23508 829 aa11.68□□□□□ -0.54
CLDN18-202ENST00000343735 CCDC93Q567U6 631 aa11.68□□□□□ -0.54
CLDN18-202ENST00000343735 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
CLDN18-202ENST00000343735 WDR66Q8TBY9 1149 aa11.68□□□□□ -0.54
CLDN18-202ENST00000343735 COA1Q9GZY4 146 aa11.68□□□□□ -0.54
CLDN18-202ENST00000343735 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
CLDN18-202ENST00000343735 NAP1L2Q9ULW6 460 aaPredicted RBP11.68□□□□□ -0.54
CLDN18-202ENST00000343735 NEK4P51957 841 aa11.68□□□□□ -0.54
CLDN18-202ENST00000343735 ARID3AQ99856 593 aa11.68□□□□□ -0.54
CLDN18-202ENST00000343735 RTFDC1Q9BY42 306 aaPredicted RBP11.68□□□□□ -0.54
CLDN18-202ENST00000343735 IRS2Q9Y4H2 1338 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 A0A0G2JLW4 131 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 SGSM2O43147 1006 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 PTGER2P43116 358 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 DALRD3Q5D0E6 543 aaKnown RBP11.67□□□□□ -0.54
CLDN18-202ENST00000343735 CWC27Q6UX04 472 aaKnown RBP11.67□□□□□ -0.54
CLDN18-202ENST00000343735 POLLQ9UGP5 575 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 DLEC1Q9Y238 1755 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 CYP2E1P05181 493 aaPredicted RBP11.67□□□□□ -0.54
CLDN18-202ENST00000343735 SCARF1Q14162 830 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 TDRD7Q8NHU6 1098 aaKnown RBP11.67□□□□□ -0.54
CLDN18-202ENST00000343735 C7orf43Q8WVR3 580 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 XRCC6P12956 609 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLDN18-202ENST00000343735 IL1R1P14778 569 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 PLCB2Q00722 1185 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 MCTP1Q6DN14 999 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
CLDN18-202ENST00000343735 LRP2BPQ9P2M1 347 aa11.67□□□□□ -0.54
CLDN18-202ENST00000343735 CHGBP05060 677 aa11.66□□□□□ -0.54
CLDN18-202ENST00000343735 UBE3CQ15386 1083 aa11.66□□□□□ -0.54
CLDN18-202ENST00000343735 TBC1D22AQ8WUA7 517 aa11.66□□□□□ -0.54
CLDN18-202ENST00000343735 PPP1R1BQ9UD71 204 aaPredicted RBP11.66□□□□□ -0.54
CLDN18-202ENST00000343735 SALL1Q9NSC2 1324 aa11.66□□□□□ -0.54
CLDN18-202ENST00000343735 KCNA3P22001 575 aa11.66□□□□□ -0.54
CLDN18-202ENST00000343735 CD209Q9NNX6 404 aa11.66□□□□□ -0.54
CLDN18-202ENST00000343735 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
CLDN18-202ENST00000343735 PSMD1Q99460 953 aa11.66□□□□□ -0.54
CLDN18-202ENST00000343735 IDH1O75874 414 aaKnown RBP11.65□□□□□ -0.54
CLDN18-202ENST00000343735 ZMYM1Q5SVZ6 1142 aa11.65□□□□□ -0.54
CLDN18-202ENST00000343735 APPBP2Q92624 585 aa11.65□□□□□ -0.54
CLDN18-202ENST00000343735 ANTXR1Q9H6X2 564 aa11.65□□□□□ -0.54
CLDN18-202ENST00000343735 SLC9C2Q5TAH2 1124 aa11.65□□□□□ -0.54
CLDN18-202ENST00000343735 PODNQ7Z5L7 613 aa11.65□□□□□ -0.54
CLDN18-202ENST00000343735 DUOX1Q9NRD9 1551 aa11.65□□□□□ -0.54
CLDN18-202ENST00000343735 C21orf2O43822 256 aa11.64□□□□□ -0.55
CLDN18-202ENST00000343735 TRAK2O60296 914 aa11.64□□□□□ -0.55
CLDN18-202ENST00000343735 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
CLDN18-202ENST00000343735 PDIA4P13667 645 aaKnown RBP11.64□□□□□ -0.55
CLDN18-202ENST00000343735 KLRK1P26718 216 aa11.64□□□□□ -0.55
CLDN18-202ENST00000343735 ADD2P35612 726 aa11.64□□□□□ -0.55
CLDN18-202ENST00000343735 RBM25P49756 843 aaKnown RBP11.64□□□□□ -0.55
CLDN18-202ENST00000343735 PI16Q6UXB8 463 aa11.64□□□□□ -0.55
CLDN18-202ENST00000343735 TXNRD3Q86VQ6 643 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms