RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 MARCKSP29966 332 aaPredicted RBP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 RAD21O60216 631 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 ARFGAP2Q8N6H7 521 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 NCOA3Q9Y6Q9 1424 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 GOLGA6CA6NDK9 693 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 GOLGA6DP0CG33 693 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 ATF3P18847 181 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 APOBRQ0VD83 1088 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.44□□□□□ -1.54
CSMD3-203ENST00000343508 CARD6Q9BX69 1037 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 GOPCQ9HD26 462 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 GOLGA6AQ9NYA3 693 aa5.44□□□□□ -1.54
CSMD3-203ENST00000343508 ZC3H13Q5T200 1668 aaKnown RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 RHOXF2BP0C7M4 288 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 STAT6P42226 847 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 FANCCQ00597 558 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 PPP1R13BQ96KQ4 1090 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 RHOXF2Q9BQY4 288 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 SLC26A6Q9BXS9 759 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 STARD3NLO95772 234 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 MSL1Q68DK7 614 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 MPRIPQ6WCQ1 1025 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 ANKRD13DQ6ZTN6 518 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 CALML4Q96GE6 196 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 BICDL2A1A5D9 508 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 NLRP5P59047 1200 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 MTHFSDQ2M296 383 aaKnown RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 AKAP4Q5JQC9 854 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 UBE3BQ7Z3V4 1068 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 TDRD7Q8NHU6 1098 aaKnown RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 NSRP1Q9H0G5 558 aaKnown RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 GUCA1BQ9UMX6 200 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 MED14O60244 1454 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 TACC1O75410 805 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 FBLN1P23142 703 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 UBXN1Q04323 297 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 LRRC27Q9C0I9 530 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 PSMA7O14818 248 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 ERCC6LQ2NKX8 1250 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 MAATS1Q7Z4T9 603 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 KRI1Q8N9T8 703 aaKnown RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 TSC1Q92574 1164 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 TRIM47Q96LD4 638 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 STK11IPQ8N1F8 1099 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 RSRC1Q96IZ7 334 aaKnown RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 TCEANC2Q96MN5 208 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 EFCC1Q9HA90 598 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 MED4Q9NPJ6 270 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 ABCA9Q8IUA7 1624 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 A0A1B0GUA9 196 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 SYTL4Q96C24 671 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 CWC25Q9NXE8 425 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 HOXB7P09629 217 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 LINS1Q8NG48 757 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 DDX12PQ92771 950 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 EXOC1Q9NV70 894 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 SEC63Q9UGP8 760 aaKnown RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 FRMPD1Q5SYB0 1578 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 LRMPQ12912 555 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 TMEM266Q2M3C6 531 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 SLFNL1Q499Z3 407 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 ZNF274Q96GC6 653 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 NBPF7P0C2Y1 421 aaPredicted RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 MTIF2P46199 727 aaKnown RBP5.43□□□□□ -1.54
CSMD3-203ENST00000343508 EFCAB13Q8IY85 973 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC113Q9H0I3 377 aa5.43□□□□□ -1.54
CSMD3-203ENST00000343508 PHACTR2O75167 634 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 LIG1P18858 919 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 RILPL1Q5EBL4 403 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 TMTC1Q8IUR5 882 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 ETF1P62495 437 aaKnown RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC121Q6ZUS5 278 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC144CPQ8IYA2 1237 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 ZFP91Q96JP5 570 aaPredicted RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 NUP58Q9BVL2 599 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 PYCARDQ9ULZ3 195 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 LUC7L2Q9Y383 392 aaKnown RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 TMCO5BA8MYB1 307 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 PRC1O43663 620 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 IL15P40933 162 aaPredicted RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 TICAM2Q86XR7 235 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 MORC2Q9Y6X9 1032 aaPredicted RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 AATKQ6ZMQ8 1374 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 USP32Q8NFA0 1604 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 MINDY4BA8MYZ0 360 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 STX10O60499 249 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 PPFIA1Q13136 1202 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 KARSQ15046 597 aaKnown RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 HSP90AA4PQ58FG1 418 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 FAM71BQ8TC56 605 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 RABGGTAQ92696 567 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 XPO4Q9C0E2 1151 aaKnown RBP5.42□□□□□ -1.54
CSMD3-203ENST00000343508 ZEB2O60315 1214 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC172P0C7W6 258 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 INPP5BP32019 993 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 KIF5BP33176 963 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 UBA7P41226 1012 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 AFMP43652 599 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 CCDC194A0A1B0GVG4 234 aa5.42□□□□□ -1.54
CSMD3-203ENST00000343508 MYCBPQ99417 103 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms