RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 SGSM2O43147 1006 aa16.79■□□□□ 0.28
PMS1-201ENST00000342075 DBNDD1Q9H9R9 158 aa16.79■□□□□ 0.28
PMS1-201ENST00000342075 SPON1Q9HCB6 807 aa16.79■□□□□ 0.28
PMS1-201ENST00000342075 PTH1RQ03431 593 aa16.79■□□□□ 0.28
PMS1-201ENST00000342075 MXD3Q9BW11 206 aa16.79■□□□□ 0.28
PMS1-201ENST00000342075 DOCK2Q92608 1830 aa16.79■□□□□ 0.28
PMS1-201ENST00000342075 M0R2C6 588 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 AOC3Q16853 763 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 SLC9C2Q5TAH2 1124 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 TMC4Q7Z404 712 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 OSBP2Q969R2 916 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 CD209Q9NNX6 404 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 PRDX5P30044 214 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 ZNF384Q8TF68 577 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 PUS7LQ9H0K6 701 aaKnown RBP16.78■□□□□ 0.28
PMS1-201ENST00000342075 ADGRA1Q86SQ6 560 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 C22orf23Q9BZE7 217 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
PMS1-201ENST00000342075 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
PMS1-201ENST00000342075 PIM2Q9P1W9 311 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 BCS1LQ9Y276 419 aa16.78■□□□□ 0.28
PMS1-201ENST00000342075 SCN9AQ15858 1988 aa16.77■□□□□ 0.28
PMS1-201ENST00000342075 TGFB2P61812 414 aa16.77■□□□□ 0.28
PMS1-201ENST00000342075 VPS53Q5VIR6 699 aa16.77■□□□□ 0.28
PMS1-201ENST00000342075 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.28
PMS1-201ENST00000342075 USP26Q9BXU7 913 aa16.77■□□□□ 0.28
PMS1-201ENST00000342075 MED23Q9ULK4 1368 aa16.77■□□□□ 0.28
PMS1-201ENST00000342075 ZNF804AQ7Z570 1209 aa16.77■□□□□ 0.27
PMS1-201ENST00000342075 MAGEB6Q8N7X4 407 aa16.77■□□□□ 0.27
PMS1-201ENST00000342075 FBXW7Q969H0 707 aa16.77■□□□□ 0.27
PMS1-201ENST00000342075 TMX4Q9H1E5 349 aaPredicted RBP16.77■□□□□ 0.27
PMS1-201ENST00000342075 COL4A5P29400 1685 aa16.76■□□□□ 0.27
PMS1-201ENST00000342075 MAST3O60307 1309 aa16.76■□□□□ 0.27
PMS1-201ENST00000342075 RNF113AO15541 343 aaKnown RBP16.76■□□□□ 0.27
PMS1-201ENST00000342075 TDRD7Q8NHU6 1098 aaKnown RBP16.76■□□□□ 0.27
PMS1-201ENST00000342075 ZC3H12CQ9C0D7 883 aaKnown RBP16.76■□□□□ 0.27
PMS1-201ENST00000342075 ZNF277Q9NRM2 450 aaPredicted RBP16.76■□□□□ 0.27
PMS1-201ENST00000342075 LRP2BPQ9P2M1 347 aa16.76■□□□□ 0.27
PMS1-201ENST00000342075 ZNF532Q9HCE3 1301 aa16.76■□□□□ 0.27
PMS1-201ENST00000342075 PDE6AP16499 860 aa16.76■□□□□ 0.27
PMS1-201ENST00000342075 LSG1Q9H089 658 aaKnown RBP16.75■□□□□ 0.27
PMS1-201ENST00000342075 DENND2AQ9ULE3 1009 aa16.75■□□□□ 0.27
PMS1-201ENST00000342075 PALD1Q9ULE6 856 aa16.75■□□□□ 0.27
PMS1-201ENST00000342075 RAI14Q9P0K7 980 aa16.75■□□□□ 0.27
PMS1-201ENST00000342075 ADD2P35612 726 aa16.75■□□□□ 0.27
PMS1-201ENST00000342075 DALRD3Q5D0E6 543 aaKnown RBP16.75■□□□□ 0.27
PMS1-201ENST00000342075 ZMYM1Q5SVZ6 1142 aa16.75■□□□□ 0.27
PMS1-201ENST00000342075 MIGA1Q8NAN2 632 aa16.75■□□□□ 0.27
PMS1-201ENST00000342075 CD2APQ9Y5K6 639 aa16.75■□□□□ 0.27
PMS1-201ENST00000342075 TCRBV5S4A2TA0A5A2 114 aa16.74■□□□□ 0.27
PMS1-201ENST00000342075 GTF2IP78347 998 aa16.74■□□□□ 0.27
PMS1-201ENST00000342075 C15orf52Q6ZUT6 534 aaKnown RBP16.74■□□□□ 0.27
PMS1-201ENST00000342075 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
PMS1-201ENST00000342075 IL1R1P14778 569 aa16.73■□□□□ 0.27
PMS1-201ENST00000342075 TTF1Q15361 905 aaPredicted RBP16.73■□□□□ 0.27
PMS1-201ENST00000342075 TAF6LQ9Y6J9 622 aa16.73■□□□□ 0.27
PMS1-201ENST00000342075 CCDC93Q567U6 631 aa16.73■□□□□ 0.27
PMS1-201ENST00000342075 KIF2CQ99661 725 aa16.73■□□□□ 0.27
PMS1-201ENST00000342075 REC8O95072 547 aa16.72■□□□□ 0.27
PMS1-201ENST00000342075 COL9A3Q14050 684 aaPredicted RBP16.72■□□□□ 0.27
PMS1-201ENST00000342075 MCMDC2Q4G0Z9 681 aa16.72■□□□□ 0.27
PMS1-201ENST00000342075 FOXP2O15409 715 aa16.72■□□□□ 0.27
PMS1-201ENST00000342075 MECOMQ03112 1051 aa16.72■□□□□ 0.27
PMS1-201ENST00000342075 DIXDC1Q155Q3 683 aa16.72■□□□□ 0.27
PMS1-201ENST00000342075 F8W031 263 aaPredicted RBP16.72■□□□□ 0.27
PMS1-201ENST00000342075 PPIP5K2O43314 1243 aa16.72■□□□□ 0.27
PMS1-201ENST00000342075 RASSF7Q02833 373 aa16.72■□□□□ 0.27
PMS1-201ENST00000342075 RTFDC1Q9BY42 306 aaPredicted RBP16.72■□□□□ 0.27
PMS1-201ENST00000342075 CCDC171Q6TFL3 1326 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 HIP1O00291 1037 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 ECE2O60344 883 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 MAP3K12Q12852 859 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 CERS5Q8N5B7 392 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.71■□□□□ 0.27
PMS1-201ENST00000342075 ADAMTSL1Q8N6G6 1762 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 RFX7Q2KHR2 1363 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 G3V3G9 751 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 MFSD14BQ5SR56 506 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 DCAF8Q5TAQ9 597 aa16.71■□□□□ 0.27
PMS1-201ENST00000342075 RAD50Q92878 1312 aa16.71■□□□□ 0.26
PMS1-201ENST00000342075 YDJCA8MPS7 323 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 NFKBIEO00221 500 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 SEMA3EO15041 775 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 PRELPP51888 382 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 APPBP2Q92624 585 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 ARMT1Q9H993 441 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 FER1L6Q2WGJ9 1857 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 GPAA1O43292 621 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 CYP7A1P22680 504 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 RASEFQ8IZ41 740 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 NSUN4Q96CB9 384 aaKnown RBP16.7■□□□□ 0.26
PMS1-201ENST00000342075 COA1Q9GZY4 146 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 PRKAB2O43741 272 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 DYNLL1P63167 89 aaKnown RBP16.7■□□□□ 0.26
PMS1-201ENST00000342075 KIAA1211Q6ZU35 1233 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 LCORLQ8N3X6 602 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 EYA3Q99504 573 aa16.7■□□□□ 0.26
PMS1-201ENST00000342075 MBD4O95243 580 aa16.69■□□□□ 0.26
PMS1-201ENST00000342075 RBM25P49756 843 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms