RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 WASHC4Q2M389 1173 aa17.07■□□□□ 0.32
TDP2-201ENST00000341060 GIGYF2Q6Y7W6 1299 aaKnown RBP17.07■□□□□ 0.32
TDP2-201ENST00000341060 DNAJC10Q8IXB1 793 aa17.07■□□□□ 0.32
TDP2-201ENST00000341060 SPC24Q8NBT2 197 aa17.07■□□□□ 0.32
TDP2-201ENST00000341060 UBE2Q2Q8WVN8 375 aa17.07■□□□□ 0.32
TDP2-201ENST00000341060 APPBP2Q92624 585 aa17.07■□□□□ 0.32
TDP2-201ENST00000341060 ZNF396Q96N95 335 aaPredicted RBP17.07■□□□□ 0.32
TDP2-201ENST00000341060 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
TDP2-201ENST00000341060 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
TDP2-201ENST00000341060 MAP3K15Q6ZN16 1313 aa17.07■□□□□ 0.32
TDP2-201ENST00000341060 CTAGE5O15320 804 aa17.06■□□□□ 0.32
TDP2-201ENST00000341060 FOSBP53539 338 aa17.06■□□□□ 0.32
TDP2-201ENST00000341060 C17orf53Q8N3J3 647 aaPredicted RBP17.06■□□□□ 0.32
TDP2-201ENST00000341060 FTOQ9C0B1 505 aaKnown RBP eCLIP17.06■□□□□ 0.32
TDP2-201ENST00000341060 ASAP1Q9ULH1 1129 aa17.06■□□□□ 0.32
TDP2-201ENST00000341060 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
TDP2-201ENST00000341060 FGAP02671 866 aa17.06■□□□□ 0.32
TDP2-201ENST00000341060 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
TDP2-201ENST00000341060 ZAP70P43403 619 aa17.06■□□□□ 0.32
TDP2-201ENST00000341060 ILDR1Q86SU0 546 aaPredicted RBP17.06■□□□□ 0.32
TDP2-201ENST00000341060 MYRIPQ8NFW9 859 aa17.06■□□□□ 0.32
TDP2-201ENST00000341060 PIGBQ92521 554 aa17.06■□□□□ 0.32
TDP2-201ENST00000341060 CCDC85AQ96PX6 553 aaPredicted RBP17.06■□□□□ 0.32
TDP2-201ENST00000341060 DNAJC25Q9H1X3 360 aa17.06■□□□□ 0.32
TDP2-201ENST00000341060 STARD3NLO95772 234 aa17.05■□□□□ 0.32
TDP2-201ENST00000341060 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.05■□□□□ 0.32
TDP2-201ENST00000341060 PLA2G4DQ86XP0 818 aa17.05■□□□□ 0.32
TDP2-201ENST00000341060 CCAR1Q8IX12 1150 aaKnown RBP17.05■□□□□ 0.32
TDP2-201ENST00000341060 MB21D2Q8IYB1 491 aaPredicted RBP17.05■□□□□ 0.32
TDP2-201ENST00000341060 PUS7LQ9H0K6 701 aaKnown RBP17.05■□□□□ 0.32
TDP2-201ENST00000341060 ATRNO75882 1429 aa17.05■□□□□ 0.32
TDP2-201ENST00000341060 ECM29Q5VYK3 1845 aa17.05■□□□□ 0.32
TDP2-201ENST00000341060 HAND2P61296 217 aa17.05■□□□□ 0.32
TDP2-201ENST00000341060 SNW1Q13573 536 aaKnown RBP17.05■□□□□ 0.32
TDP2-201ENST00000341060 GOLPH3LQ9H4A5 285 aa17.05■□□□□ 0.32
TDP2-201ENST00000341060 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
TDP2-201ENST00000341060 PLCH1Q4KWH8 1693 aa17.04■□□□□ 0.32
TDP2-201ENST00000341060 ATP2B3Q16720 1220 aa17.04■□□□□ 0.32
TDP2-201ENST00000341060 PI16Q6UXB8 463 aa17.04■□□□□ 0.32
TDP2-201ENST00000341060 CCDC73Q6ZRK6 1079 aa17.04■□□□□ 0.32
TDP2-201ENST00000341060 PYCARDQ9ULZ3 195 aa17.04■□□□□ 0.32
TDP2-201ENST00000341060 DOCK2Q92608 1830 aa17.04■□□□□ 0.32
TDP2-201ENST00000341060 WDR19Q8NEZ3 1342 aa17.04■□□□□ 0.32
TDP2-201ENST00000341060 PRC1O43663 620 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 DHX16O60231 1041 aaKnown RBP17.03■□□□□ 0.32
TDP2-201ENST00000341060 ZNF75DP51815 510 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 FAM160A1Q05DH4 1040 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 ENGASEQ8NFI3 743 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 TTLL11Q8NHH1 800 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 ZNF512BQ96KM6 892 aaPredicted RBP17.03■□□□□ 0.32
TDP2-201ENST00000341060 MAP7D2Q96T17 732 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 TRIM5Q9C035 493 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.03■□□□□ 0.32
TDP2-201ENST00000341060 GPAA1O43292 621 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 ITGA6P23229 1130 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 MCAMP43121 646 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 RBM10P98175 930 aaKnown RBP17.03■□□□□ 0.32
TDP2-201ENST00000341060 GUCY1B3Q02153 619 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 METTL24Q5JXM2 366 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 NLRP10Q86W26 655 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 GPHNQ9NQX3 736 aaPredicted RBP17.03■□□□□ 0.32
TDP2-201ENST00000341060 FAM13BQ9NYF5 915 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 LRP5O75197 1615 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 WNK3Q9BYP7 1800 aa17.03■□□□□ 0.32
TDP2-201ENST00000341060 PPFIA3O75145 1194 aa17.02■□□□□ 0.32
TDP2-201ENST00000341060 PTGS1P23219 599 aa17.02■□□□□ 0.32
TDP2-201ENST00000341060 STX1AQ16623 288 aa17.02■□□□□ 0.32
TDP2-201ENST00000341060 HSP90AB3PQ58FF7 597 aa17.02■□□□□ 0.32
TDP2-201ENST00000341060 LDHAL6AQ6ZMR3 332 aa17.02■□□□□ 0.32
TDP2-201ENST00000341060 HPS5Q9UPZ3 1129 aa17.02■□□□□ 0.32
TDP2-201ENST00000341060 COL14A1Q05707 1796 aaKnown RBP17.02■□□□□ 0.32
TDP2-201ENST00000341060 ZNF213O14771 459 aa17.02■□□□□ 0.31
TDP2-201ENST00000341060 KINO60870 393 aaKnown RBP17.02■□□□□ 0.31
TDP2-201ENST00000341060 GTF2F1P35269 517 aaKnown RBP eCLIP17.02■□□□□ 0.31
TDP2-201ENST00000341060 CTSWP56202 376 aa17.02■□□□□ 0.31
TDP2-201ENST00000341060 ANTXR2P58335 489 aa17.02■□□□□ 0.31
TDP2-201ENST00000341060 IQCB1Q15051 598 aa17.02■□□□□ 0.31
TDP2-201ENST00000341060 HLFQ16534 295 aa17.02■□□□□ 0.31
TDP2-201ENST00000341060 RALYLQ86SE5 291 aaKnown RBP17.02■□□□□ 0.31
TDP2-201ENST00000341060 SYNE4Q8N205 404 aa17.02■□□□□ 0.31
TDP2-201ENST00000341060 VGLL2Q8N8G2 317 aa17.02■□□□□ 0.31
TDP2-201ENST00000341060 GREM2Q9H772 168 aa17.02■□□□□ 0.31
TDP2-201ENST00000341060 RTEL1Q9NZ71 1219 aa17.02■□□□□ 0.31
TDP2-201ENST00000341060 BCL9O00512 1426 aa17.01■□□□□ 0.31
TDP2-201ENST00000341060 KLF18A0A0U1RQI7 1052 aa17.01■□□□□ 0.31
TDP2-201ENST00000341060 GOLGA8BA8MQT2 603 aa17.01■□□□□ 0.31
TDP2-201ENST00000341060 ME1P48163 572 aa17.01■□□□□ 0.31
TDP2-201ENST00000341060 ZSCAN25Q6NSZ9 544 aa17.01■□□□□ 0.31
TDP2-201ENST00000341060 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
TDP2-201ENST00000341060 CDC25BP30305 580 aa17■□□□□ 0.31
TDP2-201ENST00000341060 HSPA1LP34931 641 aa17■□□□□ 0.31
TDP2-201ENST00000341060 ADD2P35612 726 aa17■□□□□ 0.31
TDP2-201ENST00000341060 TTF1Q15361 905 aaPredicted RBP17■□□□□ 0.31
TDP2-201ENST00000341060 GLIPR1L2Q4G1C9 344 aa17■□□□□ 0.31
TDP2-201ENST00000341060 SARM1Q6SZW1 724 aa17■□□□□ 0.31
TDP2-201ENST00000341060 CCDC186Q7Z3E2 898 aa17■□□□□ 0.31
TDP2-201ENST00000341060 DISP2A7MBM2 1401 aa17■□□□□ 0.31
TDP2-201ENST00000341060 GPTP24298 496 aa17■□□□□ 0.31
TDP2-201ENST00000341060 ADALQ6DHV7 355 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms