RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 EN1Q05925 392 aaPredicted RBP8.62□□□□□ -1.03
NUP43-201ENST00000340413 SKAP1Q86WV1 359 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 SLF2Q8IX21 1173 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 MTFR1LQ9H019 292 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 BOLA2Q9H3K6 86 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 TAF1P21675 1872 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 FER1L6Q2WGJ9 1857 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 MMP10P09238 476 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 MCAMP43121 646 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 KCNQ4P56696 695 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 TIMM10P62072 90 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 NECTIN1Q15223 517 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 COA1Q9GZY4 146 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 ANO8Q9HCE9 1232 aaPredicted RBP8.62□□□□□ -1.03
NUP43-201ENST00000340413 GGA1Q9UJY5 639 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 MAST3O60307 1309 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 LTBP3Q9NS15 1303 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 H0YIN7 160 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 SEC24BO95487 1268 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 HIBADHP31937 336 aaKnown RBP8.61□□□□□ -1.03
NUP43-201ENST00000340413 NMIQ13287 307 aaPredicted RBP8.61□□□□□ -1.03
NUP43-201ENST00000340413 KIF2CQ99661 725 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 CIZ1Q9ULV3 898 aaPredicted RBP8.61□□□□□ -1.03
NUP43-201ENST00000340413 TCRBV5S4A2TA0A5A2 114 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 ST18O60284 1047 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 BICDL1Q6ZP65 573 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 FAM163AQ96GL9 167 aaPredicted RBP8.61□□□□□ -1.03
NUP43-201ENST00000340413 CD2APQ9Y5K6 639 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 ECM29Q5VYK3 1845 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 NPHP1O15259 732 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 ADORA1P30542 326 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 FAM84BQ96KN1 310 aaPredicted RBP8.61□□□□□ -1.03
NUP43-201ENST00000340413 PSMD1Q99460 953 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 NAV1Q8NEY1 1877 aa8.61□□□□□ -1.03
NUP43-201ENST00000340413 TAF5LO75529 589 aa8.6□□□□□ -1.03
NUP43-201ENST00000340413 ANKRD1Q15327 319 aa8.6□□□□□ -1.03
NUP43-201ENST00000340413 COL1A1P02452 1464 aaPredicted RBP8.6□□□□□ -1.03
NUP43-201ENST00000340413 KCNJ4P48050 445 aa8.6□□□□□ -1.03
NUP43-201ENST00000340413 HDLBPQ00341 1268 aaKnown RBP8.6□□□□□ -1.03
NUP43-201ENST00000340413 RTL5Q5HYW3 569 aaPredicted RBP8.6□□□□□ -1.03
NUP43-201ENST00000340413 ZKSCAN1P17029 563 aaPredicted RBP8.6□□□□□ -1.03
NUP43-201ENST00000340413 CYP2E1P05181 493 aaPredicted RBP8.59□□□□□ -1.03
NUP43-201ENST00000340413 LDHCP07864 332 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 PHKA1P46020 1223 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 WASHC4Q2M389 1173 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 RTKN2Q8IZC4 609 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 GOLIM4O00461 696 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 NPM3O75607 178 aaKnown RBP8.59□□□□□ -1.03
NUP43-201ENST00000340413 POLD1P28340 1107 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 ZAP70P43403 619 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 PPP4CP60510 307 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 RASGRF1Q13972 1273 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 HSCBQ8IWL3 235 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 C7orf43Q8WVR3 580 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 INTS4Q96HW7 963 aaKnown RBP8.59□□□□□ -1.03
NUP43-201ENST00000340413 ZSCAN31Q96LW9 406 aaPredicted RBP8.59□□□□□ -1.03
NUP43-201ENST00000340413 ANAPC4Q9UJX5 808 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 MYO5AQ9Y4I1 1855 aaKnown RBP8.59□□□□□ -1.03
NUP43-201ENST00000340413 SLX4Q8IY92 1834 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 VPS53Q5VIR6 699 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 C2CD5Q86YS7 1000 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 ZSWIM6Q9HCJ5 1215 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 CDK5RAP2Q96SN8 1893 aa8.59□□□□□ -1.03
NUP43-201ENST00000340413 NID2Q14112 1375 aa8.59□□□□□ -1.04
NUP43-201ENST00000340413 RCAN1P53805 252 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 TBC1D16Q8TBP0 767 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 UPF1Q92900 1129 aaKnown RBP eCLIP8.58□□□□□ -1.043e-9■■■■□ 25.6
NUP43-201ENST00000340413 CWC22Q9HCG8 908 aaKnown RBP8.58□□□□□ -1.04
NUP43-201ENST00000340413 MYO3BQ8WXR4 1341 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 DICER1Q9UPY3 1922 aaKnown RBP8.58□□□□□ -1.04
NUP43-201ENST00000340413 A0A0D9SFI3 127 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 PDE6AP16499 860 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 PLCG2P16885 1265 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 GPSM2P81274 684 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 DNAJC2Q99543 621 aaKnown RBP8.58□□□□□ -1.04
NUP43-201ENST00000340413 ANO2Q9NQ90 1003 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 ROBO3Q96MS0 1386 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 PODNQ7Z5L7 613 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 SGIP1Q9BQI5 828 aa8.58□□□□□ -1.04
NUP43-201ENST00000340413 MPNDQ8N594 471 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 SH2B1Q9NRF2 756 aaPredicted RBP8.57□□□□□ -1.04
NUP43-201ENST00000340413 KCNA4P22459 653 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 CWC27Q6UX04 472 aaKnown RBP8.57□□□□□ -1.04
NUP43-201ENST00000340413 ERICH6Q7L0X2 663 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 AGXT2Q9BYV1 514 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 PIH1D3Q9NQM4 214 aaKnown RBP8.57□□□□□ -1.04
NUP43-201ENST00000340413 RBM8AQ9Y5S9 174 aaKnown RBP8.57□□□□□ -1.04
NUP43-201ENST00000340413 SNX14Q9Y5W7 946 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 GAKO14976 1311 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 FAM177BA6PVY3 158 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 K7ELQ4 463 aaPredicted RBP8.57□□□□□ -1.04
NUP43-201ENST00000340413 CUL4AQ13619 759 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 SBK1Q52WX2 424 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 TSHZ3Q63HK5 1081 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 CREB3L3Q68CJ9 461 aa8.57□□□□□ -1.04
NUP43-201ENST00000340413 PATL2C9JE40 543 aaKnown RBP8.56□□□□□ -1.04
NUP43-201ENST00000340413 SLC27A2O14975 620 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 CCDC93Q567U6 631 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 VPS37DQ86XT2 251 aa8.56□□□□□ -1.04
NUP43-201ENST00000340413 TTC14Q96N46 770 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms