RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 ZNF532Q9HCE3 1301 aa25.4■■□□□ 1.66
VRK2-201ENST00000340157 CPA1P15085 419 aa25.4■■□□□ 1.66
VRK2-201ENST00000340157 DDIT3P35638 169 aa25.4■■□□□ 1.66
VRK2-201ENST00000340157 ZSCAN25Q6NSZ9 544 aa25.4■■□□□ 1.66
VRK2-201ENST00000340157 U3KPZ7 1027 aaPredicted RBP25.4■■□□□ 1.66
VRK2-201ENST00000340157 LAMA4Q16363 1823 aa25.4■■□□□ 1.66
VRK2-201ENST00000340157 XDHP47989 1333 aa25.39■■□□□ 1.66
VRK2-201ENST00000340157 ZKSCAN1P17029 563 aaPredicted RBP25.39■■□□□ 1.66
VRK2-201ENST00000340157 SF3B2Q13435 895 aaKnown RBP25.39■■□□□ 1.66
VRK2-201ENST00000340157 TSGA10IPQ3SY00 556 aa25.39■■□□□ 1.66
VRK2-201ENST00000340157 JAKMIP1Q96N16 626 aaKnown RBP25.39■■□□□ 1.66
VRK2-201ENST00000340157 TM6SF1Q9BZW5 370 aa25.39■■□□□ 1.66
VRK2-201ENST00000340157 GNL3LQ9NVN8 582 aaKnown RBP25.39■■□□□ 1.66
VRK2-201ENST00000340157 ANKIB1Q9P2G1 1089 aa25.39■■□□□ 1.66
VRK2-201ENST00000340157 CACNA1SQ13698 1873 aa25.39■■□□□ 1.65
VRK2-201ENST00000340157 SRGNP10124 158 aa25.38■■□□□ 1.65
VRK2-201ENST00000340157 CASTP20810 708 aaKnown RBP25.38■■□□□ 1.65
VRK2-201ENST00000340157 GPSM2P81274 684 aa25.38■■□□□ 1.65
VRK2-201ENST00000340157 PDGFDQ9GZP0 370 aaPredicted RBP25.38■■□□□ 1.65
VRK2-201ENST00000340157 BBOX1O75936 387 aa25.38■■□□□ 1.65
VRK2-201ENST00000340157 RNF20Q5VTR2 975 aa25.38■■□□□ 1.65
VRK2-201ENST00000340157 VPS37DQ86XT2 251 aa25.38■■□□□ 1.65
VRK2-201ENST00000340157 ZSWIM6Q9HCJ5 1215 aa25.38■■□□□ 1.65
VRK2-201ENST00000340157 LEMD3Q9Y2U8 911 aa25.38■■□□□ 1.65
VRK2-201ENST00000340157 A0A0G2JLW4 131 aa25.37■■□□□ 1.65
VRK2-201ENST00000340157 GPAA1O43292 621 aa25.37■■□□□ 1.65
VRK2-201ENST00000340157 CYP21A2P08686 494 aa25.37■■□□□ 1.65
VRK2-201ENST00000340157 HIBADHP31937 336 aaKnown RBP25.36■■□□□ 1.65
VRK2-201ENST00000340157 MAGEB6Q8N7X4 407 aa25.36■■□□□ 1.65
VRK2-201ENST00000340157 FOXD4L1Q9NU39 408 aa25.36■■□□□ 1.65
VRK2-201ENST00000340157 MAP3K12Q12852 859 aa25.36■■□□□ 1.65
VRK2-201ENST00000340157 DENND2AQ9ULE3 1009 aa25.36■■□□□ 1.65
VRK2-201ENST00000340157 MCM2P49736 904 aa25.35■■□□□ 1.65
VRK2-201ENST00000340157 GPR101Q96P66 508 aaPredicted RBP25.35■■□□□ 1.65
VRK2-201ENST00000340157 SEMA3EO15041 775 aa25.34■■□□□ 1.65
VRK2-201ENST00000340157 TMX3Q96JJ7 454 aa25.34■■□□□ 1.65
VRK2-201ENST00000340157 IL27Q8NEV9 243 aa25.34■■□□□ 1.65
VRK2-201ENST00000340157 PDS5AQ29RF7 1337 aaKnown RBP25.34■■□□□ 1.65
VRK2-201ENST00000340157 ZBTB22O15209 634 aa25.33■■□□□ 1.65
VRK2-201ENST00000340157 NPR1P16066 1061 aa25.33■■□□□ 1.65
VRK2-201ENST00000340157 PDE6BP35913 854 aa25.33■■□□□ 1.65
VRK2-201ENST00000340157 TTLL5Q6EMB2 1281 aa25.33■■□□□ 1.65
VRK2-201ENST00000340157 C15orf52Q6ZUT6 534 aaKnown RBP25.33■■□□□ 1.65
VRK2-201ENST00000340157 NOL8Q76FK4 1167 aaKnown RBP25.33■■□□□ 1.65
VRK2-201ENST00000340157 RUFY3Q7L099 469 aa25.33■■□□□ 1.65
VRK2-201ENST00000340157 NSFL1CQ9UNZ2 370 aaKnown RBP25.33■■□□□ 1.65
VRK2-201ENST00000340157 PPEF1O14829 653 aaPredicted RBP25.32■■□□□ 1.64
VRK2-201ENST00000340157 AK2P54819 239 aa25.32■■□□□ 1.64
VRK2-201ENST00000340157 STOX1Q6ZVD7 989 aa25.32■■□□□ 1.64
VRK2-201ENST00000340157 PODXL2Q9NZ53 605 aa25.32■■□□□ 1.64
VRK2-201ENST00000340157 LRP2BPQ9P2M1 347 aa25.32■■□□□ 1.64
VRK2-201ENST00000340157 DUOX1Q9NRD9 1551 aa25.32■■□□□ 1.64
VRK2-201ENST00000340157 CYP46A1Q9Y6A2 500 aa25.32■■□□□ 1.64
VRK2-201ENST00000340157 UFL1O94874 794 aa25.31■■□□□ 1.64
VRK2-201ENST00000340157 ABCF2Q9UG63 623 aa25.31■■□□□ 1.64
VRK2-201ENST00000340157 POLLQ9UGP5 575 aa25.31■■□□□ 1.64
VRK2-201ENST00000340157 MAST2Q6P0Q8 1798 aa25.31■■□□□ 1.64
VRK2-201ENST00000340157 HSP90AA1P07900 732 aaKnown RBP25.3■■□□□ 1.64
VRK2-201ENST00000340157 ATP2B4P23634 1241 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 TMC4Q7Z404 712 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 ADGRA1Q86SQ6 560 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 SP8Q8IXZ3 490 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 ZNF384Q8TF68 577 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 STRBPQ96SI9 672 aaKnown RBP25.3■■□□□ 1.64
VRK2-201ENST00000340157 ATP6V0A2Q9Y487 856 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 CCDC88AQ3V6T2 1871 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 FGAP02671 866 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 PSMA5P28066 241 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 PDRG1Q9NUG6 133 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 GGA1Q9UJY5 639 aa25.3■■□□□ 1.64
VRK2-201ENST00000340157 CUL4AQ13619 759 aa25.29■■□□□ 1.64
VRK2-201ENST00000340157 TBC1D16Q8TBP0 767 aa25.29■■□□□ 1.64
VRK2-201ENST00000340157 MASTLQ96GX5 879 aa25.29■■□□□ 1.64
VRK2-201ENST00000340157 RPS6KB1P23443 525 aa25.28■■□□□ 1.64
VRK2-201ENST00000340157 KRT32Q14532 448 aa25.28■■□□□ 1.64
VRK2-201ENST00000340157 OLFM4Q6UX06 510 aa25.28■■□□□ 1.64
VRK2-201ENST00000340157 ZGPATQ8N5A5 531 aaKnown RBP25.28■■□□□ 1.64
VRK2-201ENST00000340157 TDRD7Q8NHU6 1098 aaKnown RBP25.28■■□□□ 1.64
VRK2-201ENST00000340157 LARP6Q9BRS8 491 aaKnown RBP25.28■■□□□ 1.64
VRK2-201ENST00000340157 CHMP5Q9NZZ3 219 aa25.28■■□□□ 1.64
VRK2-201ENST00000340157 SLX4Q8IY92 1834 aa25.28■■□□□ 1.64
VRK2-201ENST00000340157 FRAT2O75474 233 aaPredicted RBP25.28■■□□□ 1.64
VRK2-201ENST00000340157 MBD4O95243 580 aa25.28■■□□□ 1.64
VRK2-201ENST00000340157 BLOC1S2Q6QNY1 142 aa25.28■■□□□ 1.64
VRK2-201ENST00000340157 AIDAQ96BJ3 306 aa25.28■■□□□ 1.64
VRK2-201ENST00000340157 TCEANC2Q96MN5 208 aa25.28■■□□□ 1.64
VRK2-201ENST00000340157 RAI14Q9P0K7 980 aa25.27■■□□□ 1.64
VRK2-201ENST00000340157 JAG2Q9Y219 1238 aa25.27■■□□□ 1.64
VRK2-201ENST00000340157 CHD4Q14839 1912 aa25.27■■□□□ 1.64
VRK2-201ENST00000340157 KIAA1551Q9HCM1 1747 aa25.27■■□□□ 1.64
VRK2-201ENST00000340157 CHAF1AQ13111 956 aaPredicted RBP25.26■■□□□ 1.63
VRK2-201ENST00000340157 C2CD5Q86YS7 1000 aa25.26■■□□□ 1.63
VRK2-201ENST00000340157 LCORLQ8N3X6 602 aa25.26■■□□□ 1.63
VRK2-201ENST00000340157 NEK1Q96PY6 1258 aa25.26■■□□□ 1.63
VRK2-201ENST00000340157 ARMT1Q9H993 441 aa25.26■■□□□ 1.63
VRK2-201ENST00000340157 ALDH1B1P30837 517 aa25.26■■□□□ 1.63
VRK2-201ENST00000340157 CTNNA3Q9UI47 895 aa25.26■■□□□ 1.63
VRK2-201ENST00000340157 LARGE1O95461 756 aa25.25■■□□□ 1.63
VRK2-201ENST00000340157 CYP7A1P22680 504 aa25.25■■□□□ 1.63
VRK2-201ENST00000340157 ZNF804AQ7Z570 1209 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms