RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 SMARCC2Q8TAQ2 1214 aa19.22■□□□□ 0.67
TRIM9-202ENST00000338969 RRP12Q5JTH9 1297 aaKnown RBP19.22■□□□□ 0.67
TRIM9-202ENST00000338969 LDHAL6AQ6ZMR3 332 aa19.22■□□□□ 0.67
TRIM9-202ENST00000338969 SH3TC1Q8TE82 1336 aa19.22■□□□□ 0.67
TRIM9-202ENST00000338969 FDPSP14324 419 aaKnown RBP19.22■□□□□ 0.67
TRIM9-202ENST00000338969 U2AF2P26368 475 aaKnown RBP eCLIP19.22■□□□□ 0.67
TRIM9-202ENST00000338969 NDUFA8P51970 172 aa19.22■□□□□ 0.67
TRIM9-202ENST00000338969 IFIT5Q13325 482 aaKnown RBP19.22■□□□□ 0.67
TRIM9-202ENST00000338969 KIF6Q6ZMV9 814 aa19.22■□□□□ 0.67
TRIM9-202ENST00000338969 SYNE3Q6ZMZ3 975 aa19.22■□□□□ 0.67
TRIM9-202ENST00000338969 PDCL2Q8N4E4 241 aa19.22■□□□□ 0.67
TRIM9-202ENST00000338969 PHKBQ93100 1093 aa19.22■□□□□ 0.67
TRIM9-202ENST00000338969 ACSBG1Q96GR2 724 aa19.22■□□□□ 0.67
TRIM9-202ENST00000338969 DSCC1Q9BVC3 393 aa19.22■□□□□ 0.67
TRIM9-202ENST00000338969 TPM3P06753 285 aa19.21■□□□□ 0.67
TRIM9-202ENST00000338969 TNS3Q68CZ2 1445 aa19.21■□□□□ 0.67
TRIM9-202ENST00000338969 EXOSC10Q01780 885 aaKnown RBP19.21■□□□□ 0.67
TRIM9-202ENST00000338969 ILDR1Q86SU0 546 aaPredicted RBP19.21■□□□□ 0.67
TRIM9-202ENST00000338969 CARMIL3Q8ND23 1372 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 GPAA1O43292 621 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 NFXL1Q6ZNB6 911 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 RCOR1Q9UKL0 485 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 ZNF213O14771 459 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 UBE2Q2LH0YL09 131 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 SKILP12757 684 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 HLFQ16534 295 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 SLC9C2Q5TAH2 1124 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 CEP57L1Q8IYX8 460 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 NKX2-3Q8TAU0 364 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 PIGBQ92521 554 aa19.2■□□□□ 0.66
TRIM9-202ENST00000338969 MRPS27Q92552 414 aaKnown RBP19.2■□□□□ 0.66
TRIM9-202ENST00000338969 CCDC69A6NI79 296 aa19.19■□□□□ 0.66
TRIM9-202ENST00000338969 NUTM2BA6NNL0 878 aaPredicted RBP19.19■□□□□ 0.66
TRIM9-202ENST00000338969 NUTM2EB1AL46 878 aaPredicted RBP19.19■□□□□ 0.66
TRIM9-202ENST00000338969 FAM160A1Q05DH4 1040 aa19.19■□□□□ 0.66
TRIM9-202ENST00000338969 ATP2B3Q16720 1220 aa19.19■□□□□ 0.66
TRIM9-202ENST00000338969 NAA16Q6N069 864 aaPredicted RBP19.19■□□□□ 0.66
TRIM9-202ENST00000338969 PLA2G4DQ86XP0 818 aa19.19■□□□□ 0.66
TRIM9-202ENST00000338969 NUTM2AQ8IVF1 878 aaPredicted RBP19.19■□□□□ 0.66
TRIM9-202ENST00000338969 CCDC191Q8NCU4 936 aa19.19■□□□□ 0.66
TRIM9-202ENST00000338969 ALDH8A1Q9H2A2 487 aaPredicted RBP19.19■□□□□ 0.66
TRIM9-202ENST00000338969 ZHX1Q9UKY1 873 aaPredicted RBP19.19■□□□□ 0.66
TRIM9-202ENST00000338969 DPCR1Q3MIW9 517 aa19.19■□□□□ 0.66
TRIM9-202ENST00000338969 TRDNQ13061 729 aa19.18■□□□□ 0.66
TRIM9-202ENST00000338969 IQCB1Q15051 598 aa19.18■□□□□ 0.66
TRIM9-202ENST00000338969 SENP2Q9HC62 589 aa19.18■□□□□ 0.66
TRIM9-202ENST00000338969 ANO10Q9NW15 660 aa19.18■□□□□ 0.66
TRIM9-202ENST00000338969 N4BP2Q86UW6 1770 aaPredicted RBP19.18■□□□□ 0.66
TRIM9-202ENST00000338969 SPECC1Q5M775 1068 aa19.18■□□□□ 0.66
TRIM9-202ENST00000338969 LLPHQ9BRT6 129 aaKnown RBP19.18■□□□□ 0.66
TRIM9-202ENST00000338969 TRMT112Q9UI30 125 aaKnown RBP19.18■□□□□ 0.66
TRIM9-202ENST00000338969 C5P01031 1676 aa19.18■□□□□ 0.66
TRIM9-202ENST00000338969 B4E1Z4 1266 aa19.18■□□□□ 0.66
TRIM9-202ENST00000338969 LMOD1P29536 600 aaPredicted RBP19.18■□□□□ 0.66
TRIM9-202ENST00000338969 SNW1Q13573 536 aaKnown RBP19.18■□□□□ 0.66
TRIM9-202ENST00000338969 GREM2Q9H772 168 aa19.18■□□□□ 0.66
TRIM9-202ENST00000338969 IQSEC3Q9UPP2 1182 aaPredicted RBP19.18■□□□□ 0.66
TRIM9-202ENST00000338969 KIF28PB7ZC32 967 aa19.17■□□□□ 0.66
TRIM9-202ENST00000338969 PDIA4P13667 645 aaKnown RBP19.17■□□□□ 0.66
TRIM9-202ENST00000338969 CCDC112Q8NEF3 446 aa19.17■□□□□ 0.66
TRIM9-202ENST00000338969 SLIT3O75094 1523 aa19.17■□□□□ 0.66
TRIM9-202ENST00000338969 OVOS2A0A0G2JMS6 1433 aa19.17■□□□□ 0.66
TRIM9-202ENST00000338969 TMC6Q7Z403 805 aa19.17■□□□□ 0.66
TRIM9-202ENST00000338969 SPTLC2O15270 562 aa19.16■□□□□ 0.66
TRIM9-202ENST00000338969 CHMP4CQ96CF2 233 aa19.16■□□□□ 0.66
TRIM9-202ENST00000338969 ZKSCAN3Q9BRR0 538 aa19.16■□□□□ 0.66
TRIM9-202ENST00000338969 CTNNA3Q9UI47 895 aa19.16■□□□□ 0.66
TRIM9-202ENST00000338969 ITGA6P23229 1130 aa19.16■□□□□ 0.66
TRIM9-202ENST00000338969 IFNKQ9P0W0 207 aa19.16■□□□□ 0.66
TRIM9-202ENST00000338969 STARD3NLO95772 234 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 TCIRG1Q13488 830 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 CMTR1Q8N1G2 835 aaKnown RBP19.15■□□□□ 0.66
TRIM9-202ENST00000338969 NCOA7Q8NI08 942 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 CCDC94Q9BW85 323 aaPredicted RBP19.15■□□□□ 0.66
TRIM9-202ENST00000338969 JCADQ9P266 1359 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 ANTXR2P58335 489 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 GOLGA8FQ08AF8 430 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 GOLGA8DPQ0D2H9 430 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 CRYBG1Q9Y4K1 1723 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 ERVV-2B6SEH9 535 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 MCAMP43121 646 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 KCNQ4P56696 695 aa19.15■□□□□ 0.66
TRIM9-202ENST00000338969 SLC3A2P08195 630 aaKnown RBP19.14■□□□□ 0.65
TRIM9-202ENST00000338969 RBM43Q6ZSC3 357 aaKnown RBP19.14■□□□□ 0.65
TRIM9-202ENST00000338969 LRRC8AQ8IWT6 810 aa19.14■□□□□ 0.65
TRIM9-202ENST00000338969 CLIC6Q96NY7 704 aa19.14■□□□□ 0.65
TRIM9-202ENST00000338969 ALG1Q9BT22 464 aa19.14■□□□□ 0.65
TRIM9-202ENST00000338969 ZBTB1Q9Y2K1 713 aa19.14■□□□□ 0.65
TRIM9-202ENST00000338969 FOXP2O15409 715 aa19.14■□□□□ 0.65
TRIM9-202ENST00000338969 CEP135Q66GS9 1140 aa19.14■□□□□ 0.65
TRIM9-202ENST00000338969 MTERF4Q7Z6M4 381 aaKnown RBP19.14■□□□□ 0.65
TRIM9-202ENST00000338969 DHX40Q8IX18 779 aaKnown RBP19.14■□□□□ 0.65
TRIM9-202ENST00000338969 ZNF274Q96GC6 653 aaPredicted RBP19.14■□□□□ 0.65
TRIM9-202ENST00000338969 PHKA1P46020 1223 aa19.13■□□□□ 0.65
TRIM9-202ENST00000338969 MYSM1Q5VVJ2 828 aa19.13■□□□□ 0.65
TRIM9-202ENST00000338969 APPBP2Q92624 585 aa19.13■□□□□ 0.65
TRIM9-202ENST00000338969 AKAP2Q9Y2D5 859 aa19.13■□□□□ 0.65
TRIM9-202ENST00000338969 LINC00301Q8NCQ3 95 aa19.13■□□□□ 0.65
TRIM9-202ENST00000338969 CARD10Q9BWT7 1032 aa19.13■□□□□ 0.65
TRIM9-202ENST00000338969 TMX1Q9H3N1 280 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms