RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 SPATA5Q8NB90 893 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 SBF2Q86WG5 1849 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 RPS6KA4O75676 772 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 UQCRFS1P1P0C7P4 283 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 HSP90B1P14625 803 aaKnown RBP19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 MRE11P49959 708 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 APOBRQ0VD83 1088 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 SCRN1Q12765 414 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 CCDC24Q8N4L8 307 aa19.28■□□□□ 0.68
SCNN1A-202ENST00000338748 A0A1B0GUL6 1792 aa19.27■□□□□ 0.68
SCNN1A-202ENST00000338748 TTF1Q15361 905 aaPredicted RBP19.27■□□□□ 0.68
SCNN1A-202ENST00000338748 GPHNQ9NQX3 736 aaPredicted RBP19.27■□□□□ 0.68
SCNN1A-202ENST00000338748 NARFQ9UHQ1 456 aa19.27■□□□□ 0.68
SCNN1A-202ENST00000338748 TAF1LQ8IZX4 1826 aa19.27■□□□□ 0.68
SCNN1A-202ENST00000338748 HMGB1P09429 215 aaKnown RBP19.27■□□□□ 0.67
SCNN1A-202ENST00000338748 RC3H1Q5TC82 1133 aaKnown RBP19.27■□□□□ 0.67
SCNN1A-202ENST00000338748 LARP1BQ659C4 914 aaKnown RBP19.27■□□□□ 0.67
SCNN1A-202ENST00000338748 CERKQ8TCT0 537 aa19.27■□□□□ 0.67
SCNN1A-202ENST00000338748 AGXT2Q9BYV1 514 aa19.27■□□□□ 0.67
SCNN1A-202ENST00000338748 DOCK2Q92608 1830 aa19.26■□□□□ 0.67
SCNN1A-202ENST00000338748 LY75O60449 1722 aa19.26■□□□□ 0.67
SCNN1A-202ENST00000338748 FGD1P98174 961 aa19.26■□□□□ 0.67
SCNN1A-202ENST00000338748 NBPF3Q9H094 633 aa19.26■□□□□ 0.67
SCNN1A-202ENST00000338748 DNM1Q05193 864 aaKnown RBP19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 UBE3CQ15386 1083 aa19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 SF3B3Q15393 1217 aaKnown RBP19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 FERMT3Q86UX7 667 aa19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 NKX2-3Q8TAU0 364 aa19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 CELF1Q92879 486 aaKnown RBP19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 DENND2AQ9ULE3 1009 aa19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 COL24A1Q17RW2 1714 aa19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 ZNF445P59923 1031 aa19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 IMMTQ16891 758 aaKnown RBP19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 TMEM87AQ8NBN3 555 aa19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 CDC5LQ99459 802 aaKnown RBP19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 ISY1Q9ULR0 285 aaKnown RBP19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 IQSEC3Q9UPP2 1182 aaPredicted RBP19.25■□□□□ 0.67
SCNN1A-202ENST00000338748 FIBPO43427 364 aa19.24■□□□□ 0.67
SCNN1A-202ENST00000338748 ZSCAN25Q6NSZ9 544 aa19.24■□□□□ 0.67
SCNN1A-202ENST00000338748 FAM173BQ6P4H8 233 aa19.24■□□□□ 0.67
SCNN1A-202ENST00000338748 ARHGEF1Q92888 912 aaKnown RBP19.24■□□□□ 0.67
SCNN1A-202ENST00000338748 C4AP0C0L4 1744 aa19.24■□□□□ 0.67
SCNN1A-202ENST00000338748 C4BP0C0L5 1744 aa19.24■□□□□ 0.67
SCNN1A-202ENST00000338748 CTNNA3Q9UI47 895 aa19.24■□□□□ 0.67
SCNN1A-202ENST00000338748 PFKFB2O60825 505 aa19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 PPFIA3O75145 1194 aa19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 CTDNEP1O95476 244 aa19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 MBD3O95983 291 aa19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 GTF2E1P29083 439 aaPredicted RBP19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 TPRNQ4KMQ1 711 aa19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 ANKRD18AQ8IVF6 992 aa19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 SEPT12Q8IYM1 358 aa19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 MAGEB6Q8N7X4 407 aa19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 DDX11Q96FC9 970 aa19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 NCOA5Q9HCD5 579 aaKnown RBP19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 RTCBQ9Y3I0 505 aaKnown RBP19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 PHF14O94880 888 aa19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 CCT2P78371 535 aaKnown RBP19.23■□□□□ 0.67
SCNN1A-202ENST00000338748 COL1A1P02452 1464 aaPredicted RBP19.22■□□□□ 0.67
SCNN1A-202ENST00000338748 ZPR1O75312 459 aa19.22■□□□□ 0.67
SCNN1A-202ENST00000338748 ANTXR2P58335 489 aa19.22■□□□□ 0.67
SCNN1A-202ENST00000338748 TBC1D10CQ8IV04 446 aa19.22■□□□□ 0.67
SCNN1A-202ENST00000338748 MB21D2Q8IYB1 491 aaPredicted RBP19.22■□□□□ 0.67
SCNN1A-202ENST00000338748 SETDB2Q96T68 719 aa19.22■□□□□ 0.67
SCNN1A-202ENST00000338748 LRRC4BQ9NT99 713 aa19.22■□□□□ 0.67
SCNN1A-202ENST00000338748 SYCE3A1L190 88 aa19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 GYG1P46976 350 aa19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 SLC10A5Q5PT55 438 aa19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 NBPF5PQ86XG9 351 aaPredicted RBP19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 NSUN7Q8NE18 718 aaKnown RBP19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 STRBPQ96SI9 672 aaKnown RBP19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 ZNF213O14771 459 aa19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 ONECUT3O60422 494 aaPredicted RBP19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 SLC51AQ86UW1 340 aa19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 EPB41L4AQ9HCS5 686 aaPredicted RBP19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 BSDC1Q9NW68 430 aaPredicted RBP19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 MINPP1Q9UNW1 487 aa19.21■□□□□ 0.67
SCNN1A-202ENST00000338748 RGL2O15211 777 aa19.2■□□□□ 0.66
SCNN1A-202ENST00000338748 PDCP20941 246 aa19.2■□□□□ 0.66
SCNN1A-202ENST00000338748 PDIA3P30101 505 aaKnown RBP19.2■□□□□ 0.66
SCNN1A-202ENST00000338748 SMARCC2Q8TAQ2 1214 aa19.2■□□□□ 0.66
SCNN1A-202ENST00000338748 NAP1L2Q9ULW6 460 aaPredicted RBP19.2■□□□□ 0.66
SCNN1A-202ENST00000338748 ATP6V1DQ9Y5K8 247 aa19.2■□□□□ 0.66
SCNN1A-202ENST00000338748 MBD4O95243 580 aa19.2■□□□□ 0.66
SCNN1A-202ENST00000338748 APPP05067 770 aa19.2■□□□□ 0.66
SCNN1A-202ENST00000338748 KLRK1P26718 216 aa19.2■□□□□ 0.66
SCNN1A-202ENST00000338748 AIDAQ96BJ3 306 aa19.2■□□□□ 0.66
SCNN1A-202ENST00000338748 ZNF804BA4D1E1 1349 aa19.19■□□□□ 0.66
SCNN1A-202ENST00000338748 TNRC6CQ9HCJ0 1690 aaKnown RBP19.19■□□□□ 0.66
SCNN1A-202ENST00000338748 PRC1O43663 620 aa19.19■□□□□ 0.66
SCNN1A-202ENST00000338748 MAP3K12Q12852 859 aa19.19■□□□□ 0.66
SCNN1A-202ENST00000338748 FAM196AQ6ZSG2 479 aa19.19■□□□□ 0.66
SCNN1A-202ENST00000338748 ARMT1Q9H993 441 aa19.19■□□□□ 0.66
SCNN1A-202ENST00000338748 TRPC5Q9UL62 973 aaPredicted RBP19.19■□□□□ 0.66
SCNN1A-202ENST00000338748 PTPDC1A2A3K4 754 aa19.18■□□□□ 0.66
SCNN1A-202ENST00000338748 NYXQ9GZU5 481 aa19.18■□□□□ 0.66
SCNN1A-202ENST00000338748 PRKAB2O43741 272 aa19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 FOSBP53539 338 aa19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 ADGRA1Q86SQ6 560 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms