RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 RGPD4Q7Z3J3 1758 aa19.35■□□□□ 0.69
HPS1-202ENST00000338546 GPAA1O43292 621 aa19.34■□□□□ 0.69
HPS1-202ENST00000338546 SLFNL1Q499Z3 407 aa19.34■□□□□ 0.69
HPS1-202ENST00000338546 CRY2Q49AN0 593 aa19.34■□□□□ 0.69
HPS1-202ENST00000338546 DENND2AQ9ULE3 1009 aa19.34■□□□□ 0.69
HPS1-202ENST00000338546 ZMYM6O95789 1325 aa19.33■□□□□ 0.69
HPS1-202ENST00000338546 SERPINB2P05120 415 aa19.33■□□□□ 0.69
HPS1-202ENST00000338546 CPA1P15085 419 aa19.33■□□□□ 0.69
HPS1-202ENST00000338546 IMMTQ16891 758 aaKnown RBP19.33■□□□□ 0.69
HPS1-202ENST00000338546 FBXO33Q7Z6M2 555 aa19.33■□□□□ 0.69
HPS1-202ENST00000338546 AKT1S1Q96B36 256 aa19.33■□□□□ 0.69
HPS1-202ENST00000338546 TNRC6CQ9HCJ0 1690 aaKnown RBP19.33■□□□□ 0.69
HPS1-202ENST00000338546 TAF1P21675 1872 aa19.33■□□□□ 0.68
HPS1-202ENST00000338546 ZNF532Q9HCE3 1301 aa19.33■□□□□ 0.68
HPS1-202ENST00000338546 SNAP23O00161 211 aa19.32■□□□□ 0.68
HPS1-202ENST00000338546 APBA3O96018 575 aa19.32■□□□□ 0.68
HPS1-202ENST00000338546 ALX1Q15699 326 aa19.32■□□□□ 0.68
HPS1-202ENST00000338546 NOL8Q76FK4 1167 aaKnown RBP19.32■□□□□ 0.68
HPS1-202ENST00000338546 DHX32Q7L7V1 743 aaKnown RBP19.32■□□□□ 0.68
HPS1-202ENST00000338546 FBXL16Q8N461 479 aa19.32■□□□□ 0.68
HPS1-202ENST00000338546 GOLGA6L22H0YM25 854 aa19.32■□□□□ 0.68
HPS1-202ENST00000338546 NLGN1Q8N2Q7 840 aa19.32■□□□□ 0.68
HPS1-202ENST00000338546 FAM84BQ96KN1 310 aaPredicted RBP19.32■□□□□ 0.68
HPS1-202ENST00000338546 LEMD3Q9Y2U8 911 aa19.32■□□□□ 0.68
HPS1-202ENST00000338546 TAF6LQ9Y6J9 622 aa19.32■□□□□ 0.68
HPS1-202ENST00000338546 KLRG2A4D1S0 409 aaPredicted RBP19.31■□□□□ 0.68
HPS1-202ENST00000338546 FOXP2O15409 715 aa19.31■□□□□ 0.68
HPS1-202ENST00000338546 BRD1O95696 1058 aa19.31■□□□□ 0.68
HPS1-202ENST00000338546 FGAP02671 866 aa19.31■□□□□ 0.68
HPS1-202ENST00000338546 GNAT2P19087 354 aa19.31■□□□□ 0.68
HPS1-202ENST00000338546 VPS37DQ86XT2 251 aa19.31■□□□□ 0.68
HPS1-202ENST00000338546 CHMP4CQ96CF2 233 aa19.31■□□□□ 0.68
HPS1-202ENST00000338546 WWC3Q9ULE0 1092 aa19.31■□□□□ 0.68
HPS1-202ENST00000338546 E7EWF7 191 aa19.3■□□□□ 0.68
HPS1-202ENST00000338546 HOXA10P31260 410 aaPredicted RBP19.3■□□□□ 0.68
HPS1-202ENST00000338546 EXOSC10Q01780 885 aaKnown RBP19.3■□□□□ 0.68
HPS1-202ENST00000338546 TOB2Q14106 344 aaPredicted RBP19.3■□□□□ 0.68
HPS1-202ENST00000338546 AIDAQ96BJ3 306 aa19.3■□□□□ 0.68
HPS1-202ENST00000338546 STRBPQ96SI9 672 aaKnown RBP19.3■□□□□ 0.68
HPS1-202ENST00000338546 AGXT2Q9BYV1 514 aa19.3■□□□□ 0.68
HPS1-202ENST00000338546 PNPLA7Q6ZV29 1317 aa19.3■□□□□ 0.68
HPS1-202ENST00000338546 MYO5AQ9Y4I1 1855 aaKnown RBP19.29■□□□□ 0.68
HPS1-202ENST00000338546 POLRMTO00411 1230 aaKnown RBP19.29■□□□□ 0.68
HPS1-202ENST00000338546 GYG1P46976 350 aa19.29■□□□□ 0.68
HPS1-202ENST00000338546 ME3Q16798 604 aa19.29■□□□□ 0.68
HPS1-202ENST00000338546 SKOR2Q2VWA4 1001 aaPredicted RBP19.29■□□□□ 0.68
HPS1-202ENST00000338546 C15orf52Q6ZUT6 534 aaKnown RBP19.29■□□□□ 0.68
HPS1-202ENST00000338546 STOX1Q6ZVD7 989 aa19.29■□□□□ 0.68
HPS1-202ENST00000338546 TMC4Q7Z404 712 aa19.29■□□□□ 0.68
HPS1-202ENST00000338546 MAGEB6Q8N7X4 407 aa19.29■□□□□ 0.68
HPS1-202ENST00000338546 RPGRQ92834 1020 aaKnown RBP19.29■□□□□ 0.68
HPS1-202ENST00000338546 RBM17Q96I25 401 aaKnown RBP19.29■□□□□ 0.68
HPS1-202ENST00000338546 TFCP2L1Q9NZI6 479 aa19.29■□□□□ 0.68
HPS1-202ENST00000338546 TPCN1Q9ULQ1 816 aa19.29■□□□□ 0.68
HPS1-202ENST00000338546 SMC3Q9UQE7 1217 aa19.29■□□□□ 0.68
HPS1-202ENST00000338546 WDR19Q8NEZ3 1342 aa19.29■□□□□ 0.68
HPS1-202ENST00000338546 WDR33Q9C0J8 1336 aaKnown RBP19.29■□□□□ 0.68
HPS1-202ENST00000338546 BBOX1O75936 387 aa19.28■□□□□ 0.68
HPS1-202ENST00000338546 BAG4O95429 457 aaKnown RBP19.28■□□□□ 0.68
HPS1-202ENST00000338546 LRP2BPQ9P2M1 347 aa19.28■□□□□ 0.68
HPS1-202ENST00000338546 ZDHHC9Q9Y397 364 aa19.28■□□□□ 0.68
HPS1-202ENST00000338546 PATL2C9JE40 543 aaKnown RBP19.27■□□□□ 0.68
HPS1-202ENST00000338546 SOCS7O14512 581 aa19.27■□□□□ 0.68
HPS1-202ENST00000338546 ZNF213O14771 459 aa19.27■□□□□ 0.68
HPS1-202ENST00000338546 HIBADHP31937 336 aaKnown RBP19.27■□□□□ 0.68
HPS1-202ENST00000338546 CCDC24Q8N4L8 307 aa19.27■□□□□ 0.68
HPS1-202ENST00000338546 CRAMP1Q96RY5 1269 aa19.27■□□□□ 0.68
HPS1-202ENST00000338546 XDHP47989 1333 aa19.27■□□□□ 0.68
HPS1-202ENST00000338546 LAMA4Q16363 1823 aa19.27■□□□□ 0.68
HPS1-202ENST00000338546 DDR1Q08345 913 aa19.27■□□□□ 0.67
HPS1-202ENST00000338546 Q6ZUG5 572 aa19.27■□□□□ 0.67
HPS1-202ENST00000338546 IRS2Q9Y4H2 1338 aa19.26■□□□□ 0.67
HPS1-202ENST00000338546 TNS1Q9HBL0 1735 aaKnown RBP19.26■□□□□ 0.67
HPS1-202ENST00000338546 LARGE1O95461 756 aa19.26■□□□□ 0.67
HPS1-202ENST00000338546 ZNF827Q17R98 1081 aa19.26■□□□□ 0.67
HPS1-202ENST00000338546 PKP1Q13835 747 aa19.25■□□□□ 0.67
HPS1-202ENST00000338546 CCDC83Q8IWF9 413 aa19.25■□□□□ 0.67
HPS1-202ENST00000338546 NCOA7Q8NI08 942 aa19.25■□□□□ 0.67
HPS1-202ENST00000338546 NRXN2Q9P2S2 1712 aa19.25■□□□□ 0.67
HPS1-202ENST00000338546 TRAK2O60296 914 aa19.24■□□□□ 0.67
HPS1-202ENST00000338546 EVCP57679 992 aa19.24■□□□□ 0.67
HPS1-202ENST00000338546 GSE1Q14687 1217 aa19.24■□□□□ 0.67
HPS1-202ENST00000338546 TTLL5Q6EMB2 1281 aa19.24■□□□□ 0.67
HPS1-202ENST00000338546 COL23A1Q86Y22 540 aaPredicted RBP19.24■□□□□ 0.67
HPS1-202ENST00000338546 BRIP1Q9BX63 1249 aa19.24■□□□□ 0.67
HPS1-202ENST00000338546 NACAP1Q9BZK3 213 aa19.24■□□□□ 0.67
HPS1-202ENST00000338546 PDCP20941 246 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 FGD1P98174 961 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 ZNF274Q96GC6 653 aaPredicted RBP19.23■□□□□ 0.67
HPS1-202ENST00000338546 LLPHQ9BRT6 129 aaKnown RBP19.23■□□□□ 0.67
HPS1-202ENST00000338546 ANKIB1Q9P2G1 1089 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 RGS17Q9UGC6 210 aaPredicted RBP19.23■□□□□ 0.67
HPS1-202ENST00000338546 COL1A1P02452 1464 aaPredicted RBP19.23■□□□□ 0.67
HPS1-202ENST00000338546 MBD4O95243 580 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 APPP05067 770 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 ATP2B4P23634 1241 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 MCM5P33992 734 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 ST3GAL1Q11201 340 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 TRDNQ13061 729 aa19.23■□□□□ 0.67
HPS1-202ENST00000338546 COL9A3Q14050 684 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms