RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 CLGNO14967 610 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 KIAA1524Q8TCG1 905 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 PPME1Q9Y570 386 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 POLD1P28340 1107 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 PRPHP41219 470 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 INF2Q27J81 1249 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 SLC9C2Q5TAH2 1124 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 FMNL3Q8IVF7 1028 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 GPCPD1Q9NPB8 672 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 PLEKHH1Q9ULM0 1364 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 NEMFO60524 1076 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 SEPT6Q14141 434 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 IFNL2Q8IZJ0 200 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 FNBP1Q96RU3 617 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 ZGPATQ8N5A5 531 aaKnown RBP13.28□□□□□ -0.28
SHANK2-201ENST00000338508 MSANTD4Q8NCY6 345 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 CTAGE1Q96RT6 745 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 ARFGAP3Q9NP61 516 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.28
SHANK2-201ENST00000338508 FEZ2Q9UHY8 353 aaPredicted RBP13.27□□□□□ -0.28
SHANK2-201ENST00000338508 B4DLN1 442 aa13.27□□□□□ -0.28
SHANK2-201ENST00000338508 MRPL12P52815 198 aaKnown RBP13.27□□□□□ -0.28
SHANK2-201ENST00000338508 VPS18Q9P253 973 aa13.27□□□□□ -0.28
SHANK2-201ENST00000338508 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 SYT1P21579 422 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 UBE2HP62256 183 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 RSPH3Q86UC2 560 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 CHPF2Q9P2E5 772 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 C9orf84Q5VXU9 1444 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 FAM204AQ9H8W3 233 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 NBPF8Q3BBV2 869 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 FCHSD1Q86WN1 690 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 HS2ST1Q7LGA3 356 aa13.27□□□□□ -0.29
SHANK2-201ENST00000338508 STMN4Q9H169 189 aaPredicted RBP13.27□□□□□ -0.29
SHANK2-201ENST00000338508 ABL1P00519 1130 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 UQCRFS1P1P0C7P4 283 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 MYCLP12524 364 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-201ENST00000338508 KRT2P35908 639 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 KRT79Q5XKE5 535 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 GSDMBQ8TAX9 411 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 LMBR1Q8WVP7 490 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 DNAJC25Q9H1X3 360 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 SNAPC4Q5SXM2 1469 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 VIMP08670 466 aaKnown RBP13.26□□□□□ -0.29
SHANK2-201ENST00000338508 RARSP54136 660 aaKnown RBP13.26□□□□□ -0.29
SHANK2-201ENST00000338508 CCDC42Q96M95 316 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 SKILP12757 684 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 CCT6AP40227 531 aaKnown RBP13.26□□□□□ -0.29
SHANK2-201ENST00000338508 CEP85LQ5SZL2 805 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 ZNF569Q5MCW4 686 aa13.26□□□□□ -0.29
SHANK2-201ENST00000338508 RIOK3O14730 519 aaKnown RBP13.25□□□□□ -0.29
SHANK2-201ENST00000338508 TBC1D2Q9BYX2 928 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 FRMD4BQ9Y2L6 1034 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 PPP1R12AO14974 1030 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-201ENST00000338508 ZSCAN23Q3MJ62 389 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 C4orf50Q6ZRC1 276 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 BEGAINQ9BUH8 593 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 GTPBP4Q9BZE4 634 aaKnown RBP13.25□□□□□ -0.29
SHANK2-201ENST00000338508 GIPC1O14908 333 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 OPA1O60313 960 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 STX10O60499 249 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 CASC4Q6P4E1 433 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 GOLGA1Q92805 767 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-201ENST00000338508 SORBS3O60504 671 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 HPDP32754 393 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-201ENST00000338508 SARNPP82979 210 aaKnown RBP13.25□□□□□ -0.29
SHANK2-201ENST00000338508 PDE1CQ14123 709 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-201ENST00000338508 WDR44Q5JSH3 913 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 LRRC43Q8N309 656 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 SNRPA1P09661 255 aaKnown RBP13.25□□□□□ -0.29
SHANK2-201ENST00000338508 PICK1Q9NRD5 415 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 USTQ9Y2C2 406 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 CCDC110Q8TBZ0 833 aa13.25□□□□□ -0.29
SHANK2-201ENST00000338508 NOP56O00567 594 aaKnown RBP13.24□□□□□ -0.29
SHANK2-201ENST00000338508 SLC8A3P57103 927 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 XAGE3Q8WTP9 111 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 TTC14Q96N46 770 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 RABEP2Q9H5N1 569 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-201ENST00000338508 MAN1A1P33908 653 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 ITIH3Q06033 890 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 CEP120Q8N960 986 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 STIM2Q9P246 746 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 CAPN2P17655 700 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 ZSCAN16Q9H4T2 348 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-201ENST00000338508 SEL1L2Q5TEA6 688 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 CCDC89Q8N998 374 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 STMN2Q93045 179 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.24□□□□□ -0.29
SHANK2-201ENST00000338508 ANKFY1Q9P2R3 1169 aa13.24□□□□□ -0.29
SHANK2-201ENST00000338508 PTPDC1A2A3K4 754 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 TRPC3Q13507 836 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 DTHD1Q6ZMT9 781 aa13.23□□□□□ -0.29
SHANK2-201ENST00000338508 SDCCAG8Q86SQ7 713 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-201ENST00000338508 DACT3Q96B18 629 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms