RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 GNL2Q13823 731 aaKnown RBP13.75□□□□□ -0.21
RBM39-202ENST00000338163 PTPN21Q16825 1174 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 SUCLG2Q96I99 432 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 TRIM34Q9BYJ4 488 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 TMX1Q9H3N1 280 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 RCOR1Q9UKL0 485 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 PLCH1Q4KWH8 1693 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 BTBD11A6QL63 1104 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 ADD1P35611 737 aaKnown RBP13.75□□□□□ -0.21
RBM39-202ENST00000338163 VPS72Q15906 364 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 TEX35Q5T0J7 233 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
RBM39-202ENST00000338163 EPC1Q9H2F5 836 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 L2HGDHQ9H9P8 463 aa13.75□□□□□ -0.21
RBM39-202ENST00000338163 CYP21A2P08686 494 aa13.74□□□□□ -0.21
RBM39-202ENST00000338163 PLA2G4AP47712 749 aa13.74□□□□□ -0.21
RBM39-202ENST00000338163 CCDC150Q8NCX0 1101 aa13.74□□□□□ -0.21
RBM39-202ENST00000338163 CCDC34Q96HJ3 373 aa13.74□□□□□ -0.21
RBM39-202ENST00000338163 MED23Q9ULK4 1368 aa13.74□□□□□ -0.21
RBM39-202ENST00000338163 CYP27B1O15528 508 aa13.74□□□□□ -0.21
RBM39-202ENST00000338163 AKAP4Q5JQC9 854 aa13.74□□□□□ -0.21
RBM39-202ENST00000338163 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
RBM39-202ENST00000338163 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
RBM39-202ENST00000338163 QTRT2Q9H974 415 aaKnown RBP13.74□□□□□ -0.21
RBM39-202ENST00000338163 ZCCHC17Q9NP64 241 aaKnown RBP13.74□□□□□ -0.21
RBM39-202ENST00000338163 DBF4Q9UBU7 674 aaPredicted RBP13.74□□□□□ -0.21
RBM39-202ENST00000338163 NDUFA8P51970 172 aa13.73□□□□□ -0.21
RBM39-202ENST00000338163 NSUN7Q8NE18 718 aaKnown RBP13.73□□□□□ -0.21
RBM39-202ENST00000338163 OSBPL5Q9H0X9 879 aaPredicted RBP13.73□□□□□ -0.21
RBM39-202ENST00000338163 PRAMEF22A3QJZ6 481 aa13.73□□□□□ -0.21
RBM39-202ENST00000338163 GRM8O00222 908 aa13.73□□□□□ -0.21
RBM39-202ENST00000338163 POLR3DP05423 398 aaPredicted RBP13.73□□□□□ -0.21
RBM39-202ENST00000338163 TPM4P67936 248 aa13.73□□□□□ -0.21
RBM39-202ENST00000338163 DDX46Q7L014 1031 aaKnown RBP13.73□□□□□ -0.21
RBM39-202ENST00000338163 ENGASEQ8NFI3 743 aa13.73□□□□□ -0.21
RBM39-202ENST00000338163 CARD6Q9BX69 1037 aa13.73□□□□□ -0.21
RBM39-202ENST00000338163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.212e-26■■■□□ 15.2
RBM39-202ENST00000338163 IMPACTQ9P2X3 320 aa13.73□□□□□ -0.21
RBM39-202ENST00000338163 PCDHA7Q9UN72 937 aa13.73□□□□□ -0.21
RBM39-202ENST00000338163 EXOC5O00471 708 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 ETF1P62495 437 aaKnown RBP13.72□□□□□ -0.21
RBM39-202ENST00000338163 GOLGA8FQ08AF8 430 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 GOLGA8DPQ0D2H9 430 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 STK38Q15208 465 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 OTUD7BQ6GQQ9 843 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 IFNL2Q8IZJ0 200 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 OVOS2A0A0G2JMS6 1433 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 PHKG2P15735 406 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 RAD51AP2Q09MP3 1159 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 ALDH8A1Q9H2A2 487 aaPredicted RBP13.72□□□□□ -0.21
RBM39-202ENST00000338163 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
RBM39-202ENST00000338163 ST5P78524 1137 aa13.71□□□□□ -0.21
RBM39-202ENST00000338163 NAA16Q6N069 864 aaPredicted RBP13.71□□□□□ -0.21
RBM39-202ENST00000338163 ZFP91Q96JP5 570 aaPredicted RBP13.71□□□□□ -0.21
RBM39-202ENST00000338163 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.21
RBM39-202ENST00000338163 UTP14AQ9BVJ6 771 aaKnown RBP13.71□□□□□ -0.21
RBM39-202ENST00000338163 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.71□□□□□ -0.21
RBM39-202ENST00000338163 KIAA1468Q9P260 1216 aa13.71□□□□□ -0.21
RBM39-202ENST00000338163 ORC3Q9UBD5 711 aaPredicted RBP13.71□□□□□ -0.21
RBM39-202ENST00000338163 TRPC5Q9UL62 973 aaPredicted RBP13.71□□□□□ -0.21
RBM39-202ENST00000338163 THRAP3Q9Y2W1 955 aaKnown RBP13.71□□□□□ -0.21
RBM39-202ENST00000338163 PSDA5PKW4 1024 aaPredicted RBP13.71□□□□□ -0.21
RBM39-202ENST00000338163 ATP1A3P13637 1013 aa13.71□□□□□ -0.21
RBM39-202ENST00000338163 DDB1Q16531 1140 aa13.71□□□□□ -0.21
RBM39-202ENST00000338163 CCDC93Q567U6 631 aa13.71□□□□□ -0.21
RBM39-202ENST00000338163 KSR2Q6VAB6 950 aa13.71□□□□□ -0.21
RBM39-202ENST00000338163 HDAC5Q9UQL6 1122 aa13.71□□□□□ -0.21
RBM39-202ENST00000338163 COL15A1P39059 1388 aa13.71□□□□□ -0.21
RBM39-202ENST00000338163 PCDH11XQ9BZA7 1347 aa13.71□□□□□ -0.22
RBM39-202ENST00000338163 PCDH11YQ9BZA8 1340 aa13.71□□□□□ -0.22
RBM39-202ENST00000338163 ALDH1L1O75891 902 aa13.71□□□□□ -0.22
RBM39-202ENST00000338163 CTDNEP1O95476 244 aa13.71□□□□□ -0.22
RBM39-202ENST00000338163 SERPINC1P01008 464 aa13.71□□□□□ -0.22
RBM39-202ENST00000338163 SLC3A2P08195 630 aaKnown RBP13.71□□□□□ -0.22
RBM39-202ENST00000338163 KRBA2Q6ZNG9 492 aa13.71□□□□□ -0.22
RBM39-202ENST00000338163 FMR1NBQ8N0W7 255 aaPredicted RBP13.71□□□□□ -0.22
RBM39-202ENST00000338163 KAZALD1Q96I82 304 aa13.71□□□□□ -0.22
RBM39-202ENST00000338163 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.22
RBM39-202ENST00000338163 TNNT3P45378 269 aaPredicted RBP13.7□□□□□ -0.22
RBM39-202ENST00000338163 GYS2P54840 703 aa13.7□□□□□ -0.22
RBM39-202ENST00000338163 EVCP57679 992 aa13.7□□□□□ -0.22
RBM39-202ENST00000338163 TSGA10IPQ3SY00 556 aa13.7□□□□□ -0.22
RBM39-202ENST00000338163 CFAP100Q494V2 611 aa13.7□□□□□ -0.22
RBM39-202ENST00000338163 HSP90AA4PQ58FG1 418 aa13.7□□□□□ -0.22
RBM39-202ENST00000338163 STOX1Q6ZVD7 989 aa13.7□□□□□ -0.22
RBM39-202ENST00000338163 PFKFB2O60825 505 aa13.7□□□□□ -0.22
RBM39-202ENST00000338163 OAS2P29728 719 aaKnown RBP13.7□□□□□ -0.22
RBM39-202ENST00000338163 CREBRFQ8IUR6 639 aa13.7□□□□□ -0.22
RBM39-202ENST00000338163 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
RBM39-202ENST00000338163 SNRKQ9NRH2 765 aa13.7□□□□□ -0.22
RBM39-202ENST00000338163 RNMTO43148 476 aaKnown RBP13.69□□□□□ -0.22
RBM39-202ENST00000338163 BARGINQ6ZT62 677 aa13.69□□□□□ -0.22
RBM39-202ENST00000338163 RAB11FIP4Q86YS3 637 aa13.69□□□□□ -0.22
RBM39-202ENST00000338163 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
RBM39-202ENST00000338163 TULP2O00295 520 aa13.69□□□□□ -0.22
RBM39-202ENST00000338163 FANCCQ00597 558 aa13.69□□□□□ -0.22
RBM39-202ENST00000338163 RIC3Q7Z5B4 369 aa13.69□□□□□ -0.22
RBM39-202ENST00000338163 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
RBM39-202ENST00000338163 DBNLQ9UJU6 430 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms