RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 TEX35Q5T0J7 233 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 RUFY3Q7L099 469 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 SYNE4Q8N205 404 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 KIAA1524Q8TCG1 905 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 TTC41PQ6P2S7 1318 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 ZNF142P52746 1687 aaPredicted RBP7.49□□□□□ -1.21
HMG20A-201ENST00000336216 COL3A1P02461 1466 aaPredicted RBP7.49□□□□□ -1.21
HMG20A-201ENST00000336216 TSPY2A6NKD2 308 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 SLC27A2O14975 620 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 CDC37L1Q7L3B6 337 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 KRT222Q8N1A0 295 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 ANKRD20A12PQ8NF67 263 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 XAGE2Q96GT9 111 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 ZSWIM4Q9H7M6 989 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 B4E1Z4 1266 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 URI1O94763 535 aaPredicted RBP7.49□□□□□ -1.21
HMG20A-201ENST00000336216 KIF20AO95235 890 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 IPO7O95373 1038 aaKnown RBP7.49□□□□□ -1.21
HMG20A-201ENST00000336216 ZAP70P43403 619 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 IQCA1Q86XH1 822 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 SETDB2Q96T68 719 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 OGFRQ9NZT2 677 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 CTDP1Q9Y5B0 961 aaPredicted RBP7.49□□□□□ -1.21
HMG20A-201ENST00000336216 CDKL5O76039 1030 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 HMGB1P09429 215 aaKnown RBP7.49□□□□□ -1.21
HMG20A-201ENST00000336216 TTC6Q86TZ1 520 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 UBXN4Q92575 508 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 ZNF622Q969S3 477 aaKnown RBP eCLIP7.49□□□□□ -1.211e-7■□□□□ 10
HMG20A-201ENST00000336216 ANKRD26Q9UPS8 1709 aa7.49□□□□□ -1.21
HMG20A-201ENST00000336216 ARID5BQ14865 1188 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 TMC6Q7Z403 805 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 ANKRD18AQ8IVF6 992 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 CMTR1Q8N1G2 835 aaKnown RBP7.48□□□□□ -1.21
HMG20A-201ENST00000336216 AK7Q96M32 723 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 CDC5LQ99459 802 aaKnown RBP7.48□□□□□ -1.21
HMG20A-201ENST00000336216 ALG1Q9BT22 464 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 ARGLU1Q9NWB6 273 aaPredicted RBP7.48□□□□□ -1.21
HMG20A-201ENST00000336216 TFCP2L1Q9NZI6 479 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 TCEAL9Q9UHQ7 104 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 ZNF215Q9UL58 517 aaPredicted RBP7.48□□□□□ -1.21
HMG20A-201ENST00000336216 PNPLA6Q8IY17 1366 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 PTPDC1A2A3K4 754 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 SMTNL1A8MU46 457 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 RNF113AO15541 343 aaKnown RBP7.48□□□□□ -1.21
HMG20A-201ENST00000336216 CUL4AQ13619 759 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 CCDC152Q4G0S7 254 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 CTCFLQ8NI51 663 aaPredicted RBP7.48□□□□□ -1.21
HMG20A-201ENST00000336216 RPGRQ92834 1020 aaKnown RBP7.48□□□□□ -1.21
HMG20A-201ENST00000336216 NLRP3Q96P20 1036 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 PCDH11XQ9BZA7 1347 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 PCDH11YQ9BZA8 1340 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 RGPD8O14715 1765 aaPredicted RBP7.48□□□□□ -1.21
HMG20A-201ENST00000336216 GNPATO15228 680 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 ZBTB43O43298 467 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 CHGBP05060 677 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 HSPA4P34932 840 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 ME3Q16798 604 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 EPHA10Q5JZY3 1008 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 SPECC1Q5M775 1068 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 SMIM5Q71RC9 77 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 ZNF444Q8N0Y2 327 aaPredicted RBP7.48□□□□□ -1.21
HMG20A-201ENST00000336216 IL25Q9H293 177 aa7.48□□□□□ -1.21
HMG20A-201ENST00000336216 A0A1B0GVL5 298 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 RIMBP2O15034 1052 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 MBD4O95243 580 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 DHX32Q7L7V1 743 aaKnown RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 AOPEPQ8N6M6 819 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 CNNM3Q8NE01 707 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 PHKBQ93100 1093 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 CDK5RAP3Q96JB5 506 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 UIMC1Q96RL1 719 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 UTP14AQ9BVJ6 771 aaKnown RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 ARMT1Q9H993 441 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 HMG20BQ9P0W2 317 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 DBNLQ9UJU6 430 aaKnown RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 MTMR6Q9Y217 621 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 ZNF335Q9H4Z2 1342 aaPredicted RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 CYP27B1O15528 508 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 SFPQP23246 707 aaKnown RBP eCLIP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 AFMP43652 599 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 NLRP5P59047 1200 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 SSRP1Q08945 709 aaKnown RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 ENOX2Q16206 610 aaKnown RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 SOGA3Q5TF21 947 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 SYT10Q6XYQ8 523 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 CCDC47Q96A33 483 aaKnown RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 DDX19AQ9NUU7 478 aaKnown RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 ERBB3P21860 1342 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 RAD50Q92878 1312 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 KIF24Q5T7B8 1368 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 USP31Q70CQ4 1352 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 NR1I2O75469 434 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 ADORA1P30542 326 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 ZNF75DP51815 510 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 PICALMQ13492 652 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 SNW1Q13573 536 aaKnown RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 ZNF589Q86UQ0 364 aaPredicted RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 CACTINQ8WUQ7 758 aaKnown RBP7.47□□□□□ -1.21
HMG20A-201ENST00000336216 KCNF1Q9H3M0 494 aa7.47□□□□□ -1.21
HMG20A-201ENST00000336216 PAXBP1Q9Y5B6 917 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms