RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 ANKRD2Q9GZV1 360 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 NRDCO43847 1150 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 GYS1P13807 737 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 ARID4AP29374 1257 aaPredicted RBP12.54□□□□□ -0.4
AP1S3-201ENST00000334271 ST5P78524 1137 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 UBE4AQ14139 1066 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 ERFEQ4G0M1 354 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 ZFYVE27Q5T4F4 411 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 PROM2Q8N271 834 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 PDS5AQ29RF7 1337 aaKnown RBP12.53□□□□□ -0.4
AP1S3-201ENST00000334271 IFIT1P09914 478 aaKnown RBP12.53□□□□□ -0.4
AP1S3-201ENST00000334271 CALRP27797 417 aaKnown RBP12.53□□□□□ -0.4
AP1S3-201ENST00000334271 NBPF9Q3BBW0 867 aa12.53□□□□□ -0.4
AP1S3-201ENST00000334271 KIAA1211Q6ZU35 1233 aa12.53□□□□□ -0.4
AP1S3-201ENST00000334271 MPNDQ8N594 471 aa12.53□□□□□ -0.4
AP1S3-201ENST00000334271 KBTBD3Q8NAB2 608 aa12.53□□□□□ -0.4
AP1S3-201ENST00000334271 DBNDD2Q9BQY9 259 aa12.53□□□□□ -0.4
AP1S3-201ENST00000334271 KLRG2A4D1S0 409 aaPredicted RBP12.53□□□□□ -0.4
AP1S3-201ENST00000334271 HCLS1P14317 486 aaPredicted RBP12.53□□□□□ -0.4
AP1S3-201ENST00000334271 ZSCAN25Q6NSZ9 544 aa12.53□□□□□ -0.4
AP1S3-201ENST00000334271 ZNF594Q96JF6 807 aaPredicted RBP12.53□□□□□ -0.4
AP1S3-201ENST00000334271 A6NJR5 290 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 SEMA3EO15041 775 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 KIF4AO95239 1232 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 PAX3P23760 479 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 MCM2P49736 904 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 NFIXQ14938 502 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 POTEAQ6S8J7 498 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 CNBD1Q8NA66 436 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 XAGE2Q96GT9 111 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 PUS3Q9BZE2 481 aaKnown RBP12.52□□□□□ -0.41
AP1S3-201ENST00000334271 HELLSQ9NRZ9 838 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 GOLIM4O00461 696 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 RHBDL3P58872 404 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 TTC39AQ5SRH9 613 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 SYNE4Q8N205 404 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 NEUROD6Q96NK8 337 aa12.52□□□□□ -0.41
AP1S3-201ENST00000334271 SRP68Q9UHB9 627 aaKnown RBP12.52□□□□□ -0.41
AP1S3-201ENST00000334271 DUOX1Q9NRD9 1551 aa12.51□□□□□ -0.41
AP1S3-201ENST00000334271 CRY2Q49AN0 593 aa12.51□□□□□ -0.41
AP1S3-201ENST00000334271 GIMAP6Q6P9H5 292 aa12.51□□□□□ -0.41
AP1S3-201ENST00000334271 MAMSTRQ6ZN01 415 aa12.51□□□□□ -0.41
AP1S3-201ENST00000334271 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
AP1S3-201ENST00000334271 KCNB2Q92953 911 aa12.51□□□□□ -0.41
AP1S3-201ENST00000334271 PAG1Q9NWQ8 432 aa12.51□□□□□ -0.41
AP1S3-201ENST00000334271 TLR7Q9NYK1 1049 aaKnown RBP12.51□□□□□ -0.41
AP1S3-201ENST00000334271 CREB3O43889 395 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 HOXA10P31260 410 aaPredicted RBP12.5□□□□□ -0.41
AP1S3-201ENST00000334271 RPS8P62241 208 aaKnown RBP12.5□□□□□ -0.41
AP1S3-201ENST00000334271 ZNF280DQ6N043 979 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 FSD1Q9BTV5 496 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.41
AP1S3-201ENST00000334271 MYH7P12883 1935 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 KCNQ4P56696 695 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 CCDC181Q5TID7 509 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 C15orf52Q6ZUT6 534 aaKnown RBP12.5□□□□□ -0.41
AP1S3-201ENST00000334271 KCNV2Q8TDN2 545 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 CRAMP1Q96RY5 1269 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 BOLA2Q9H3K6 86 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 GNL3LQ9NVN8 582 aaKnown RBP12.5□□□□□ -0.41
AP1S3-201ENST00000334271 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 KIAA1522Q9P206 1035 aaPredicted RBP12.5□□□□□ -0.41
AP1S3-201ENST00000334271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.5□□□□□ -0.41
AP1S3-201ENST00000334271 MED23Q9ULK4 1368 aa12.5□□□□□ -0.41
AP1S3-201ENST00000334271 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
AP1S3-201ENST00000334271 HSPA4P34932 840 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 BAG6P46379 1132 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 TIMM10P62072 90 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
AP1S3-201ENST00000334271 TSHZ3Q63HK5 1081 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 CAMKK2Q96RR4 588 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 HMG20BQ9P0W2 317 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 KLHL42Q9P2K6 505 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 AKAP11Q9UKA4 1901 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 DOCK2Q92608 1830 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 GOLGA6CA6NDK9 693 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 GOLGA6BA6NDN3 693 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 BBOX1O75936 387 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 SERPINB2P05120 415 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 GOLGA6DP0CG33 693 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 GRAPQ13588 217 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
AP1S3-201ENST00000334271 RBM17Q96I25 401 aaKnown RBP12.49□□□□□ -0.41
AP1S3-201ENST00000334271 GOLGA6AQ9NYA3 693 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 LRRC37AA6NMS7 1700 aa12.49□□□□□ -0.41
AP1S3-201ENST00000334271 POLRMTO00411 1230 aaKnown RBP12.48□□□□□ -0.41
AP1S3-201ENST00000334271 ST18O60284 1047 aa12.48□□□□□ -0.41
AP1S3-201ENST00000334271 CHRNDQ07001 517 aa12.48□□□□□ -0.41
AP1S3-201ENST00000334271 RNF20Q5VTR2 975 aa12.48□□□□□ -0.41
AP1S3-201ENST00000334271 PRR5LQ6MZQ0 368 aa12.48□□□□□ -0.41
AP1S3-201ENST00000334271 HSCBQ8IWL3 235 aa12.48□□□□□ -0.41
AP1S3-201ENST00000334271 BRIP1Q9BX63 1249 aa12.48□□□□□ -0.41
AP1S3-201ENST00000334271 TM6SF1Q9BZW5 370 aa12.48□□□□□ -0.41
AP1S3-201ENST00000334271 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
AP1S3-201ENST00000334271 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
AP1S3-201ENST00000334271 ZNF804BA4D1E1 1349 aa12.48□□□□□ -0.41
AP1S3-201ENST00000334271 HMGB1P1B2RPK0 211 aaPredicted RBP12.47□□□□□ -0.41
AP1S3-201ENST00000334271 NPHP1O15259 732 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 SH3BP5O60239 455 aa12.47□□□□□ -0.41
AP1S3-201ENST00000334271 TSGA10IPQ3SY00 556 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms