RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 CYP27B1O15528 508 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 PPIP5K2O43314 1243 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 CCDC173Q0VFZ6 552 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 C2CD5Q86YS7 1000 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 TRMT2AQ8IZ69 625 aaKnown RBP12.95□□□□□ -0.34
POLR1B-202ENST00000333990 CCDC24Q8N4L8 307 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 LRRC27Q9C0I9 530 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 COPRSQ9NQ92 184 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 DDX19AQ9NUU7 478 aaKnown RBP12.95□□□□□ -0.34
POLR1B-202ENST00000333990 EPB41L2O43491 1005 aaKnown RBP12.95□□□□□ -0.34
POLR1B-202ENST00000333990 FGFR1OPO95684 399 aaKnown RBP12.95□□□□□ -0.34
POLR1B-202ENST00000333990 TMEM87BQ96K49 555 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 ANO10Q9NW15 660 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 QRICH2Q9H0J4 1663 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 LARP6Q9BRS8 491 aaKnown RBP12.94□□□□□ -0.34
POLR1B-202ENST00000333990 C6orf50Q9HD87 102 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 JAG2Q9Y219 1238 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
POLR1B-202ENST00000333990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.94□□□□□ -0.34
POLR1B-202ENST00000333990 UBE4AQ14139 1066 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 KANK3Q6NY19 840 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 CLEC4GQ6UXB4 293 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 ERMNQ8TAM6 284 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 NCOA3Q9Y6Q9 1424 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 GPAA1O43292 621 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 ZFYVE27Q5T4F4 411 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 TCEANC2Q96MN5 208 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 LRRC2Q9BYS8 371 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 AXIN2Q9Y2T1 843 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 CRB1P82279 1406 aa12.94□□□□□ -0.34
POLR1B-202ENST00000333990 SNX21Q969T3 373 aa12.93□□□□□ -0.34
POLR1B-202ENST00000333990 RRP36Q96EU6 259 aaKnown RBP12.93□□□□□ -0.34
POLR1B-202ENST00000333990 TSG101Q99816 390 aa12.93□□□□□ -0.34
POLR1B-202ENST00000333990 DNAI2Q9GZS0 605 aa12.93□□□□□ -0.34
POLR1B-202ENST00000333990 TRIM21P19474 475 aaKnown RBP12.93□□□□□ -0.34
POLR1B-202ENST00000333990 SCLT1Q96NL6 688 aa12.93□□□□□ -0.34
POLR1B-202ENST00000333990 RBM28Q9NW13 759 aaKnown RBP12.93□□□□□ -0.34
POLR1B-202ENST00000333990 IBTKQ9P2D0 1353 aaPredicted RBP12.93□□□□□ -0.34
POLR1B-202ENST00000333990 BBOX1O75936 387 aa12.93□□□□□ -0.34
POLR1B-202ENST00000333990 SERPINB2P05120 415 aa12.93□□□□□ -0.34
POLR1B-202ENST00000333990 GNA11P29992 359 aa12.93□□□□□ -0.34
POLR1B-202ENST00000333990 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
POLR1B-202ENST00000333990 MATR3P43243 847 aaKnown RBP eCLIP12.93□□□□□ -0.34
POLR1B-202ENST00000333990 MSL1Q68DK7 614 aa12.93□□□□□ -0.34
POLR1B-202ENST00000333990 STXBP4Q6ZWJ1 553 aa12.93□□□□□ -0.34
POLR1B-202ENST00000333990 CNNM3Q8NE01 707 aa12.93□□□□□ -0.34
POLR1B-202ENST00000333990 NAPAP54920 295 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 CCDC183Q5T5S1 534 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 RAB11FIP4Q86YS3 637 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 ZNF521Q96K83 1311 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 H7C1D1 291 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 RPS6KA4O75676 772 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 DLGAP5Q15398 846 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 GJD4Q96KN9 370 aaPredicted RBP12.92□□□□□ -0.34
POLR1B-202ENST00000333990 GPR108Q9NPR9 543 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 LEMD3Q9Y2U8 911 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 RIMS1Q86UR5 1692 aaKnown RBP12.92□□□□□ -0.34
POLR1B-202ENST00000333990 TNFAIP1Q13829 316 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 SMARCC2Q8TAQ2 1214 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 SPATA31D1Q6ZQQ2 1576 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 CIAO1O76071 339 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 ADRA2BP18089 450 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 GPS2Q13227 327 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 CC2D2BQ6DHV5 1058 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 HEATR3Q7Z4Q2 680 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 FSIP1Q8NA03 581 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 ARHGEF10LQ9HCE6 1279 aa12.92□□□□□ -0.34
POLR1B-202ENST00000333990 PROSER3Q2NL68 480 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 NECAB1Q8N987 351 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 PRM3Q9NNZ6 103 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 SGSM2O43147 1006 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 ZAP70P43403 619 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 RUFY3Q7L099 469 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 KCNG4Q8TDN1 519 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 TEKT1Q969V4 418 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 DEF6Q9H4E7 631 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 PICK1Q9NRD5 415 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 PDE8BO95263 885 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 PPP2R5BQ15173 497 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 MFSD14BQ5SR56 506 aa12.91□□□□□ -0.34
POLR1B-202ENST00000333990 SPDYE3A6NKU9 549 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 SEMA3EO15041 775 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 ZSCAN22P10073 491 aaPredicted RBP12.9□□□□□ -0.34
POLR1B-202ENST00000333990 ARMT1Q9H993 441 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 XDHP47989 1333 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 PREX1Q8TCU6 1659 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 DPY19L2Q6NUT2 758 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
POLR1B-202ENST00000333990 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 TECPR2O15040 1411 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 PTPRUQ92729 1446 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
POLR1B-202ENST00000333990 MNS1Q8NEH6 495 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms