RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 BMP15O95972 392 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 NBPF10Q6P3W6 841 aaKnown RBP11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 FCHSD2O94868 740 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 CCDC102BQ68D86 513 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 CAPS2Q9BXY5 557 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 CHCHD3Q9NX63 227 aaKnown RBP11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 TSKSQ9UJT2 592 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 ITSN2Q9NZM3 1697 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 CHUKO15111 745 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 TERF2Q15554 542 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 USP48Q86UV5 1035 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 KLHDC4Q8TBB5 520 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 CTTNBP2NLQ9P2B4 639 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 IQCDQ96DY2 449 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 TBC1D9Q6ZT07 1266 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 MIS12Q9H081 205 aa11.6□□□□□ -0.55
SPTBN1-201ENST00000333896 CAMSAP2Q08AD1 1489 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 AMPD3Q01432 767 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 GIMAP6Q6P9H5 292 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 LRP2BPQ9P2M1 347 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 SMARCA4P51532 1647 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 SLFNL1Q499Z3 407 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 ANKRD24Q8TF21 1146 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 P3H4Q92791 437 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 FLOT1O75955 427 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 VPS41P49754 854 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 PNMA8AQ86V59 439 aaPredicted RBP11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 BICD1Q96G01 975 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 MRFAP1Q9Y605 127 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 SLC4A8Q2Y0W8 1093 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 C8orf34Q49A92 452 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 RASIP1Q5U651 963 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 BAG1Q99933 345 aaPredicted RBP11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 BAIAP2L1Q9UHR4 511 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 IQCA1Q86XH1 822 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 PTPN23Q9H3S7 1636 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 GJC1P36383 396 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 TRMT1LQ7Z2T5 733 aaKnown RBP11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 RABGGTAQ92696 567 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 CALML4Q96GE6 196 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 SUFUQ9UMX1 484 aa11.59□□□□□ -0.55
SPTBN1-201ENST00000333896 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.55
SPTBN1-201ENST00000333896 PCYT1AP49585 367 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 BLVRAP53004 296 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 UAP1Q16222 522 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 ACTN4O43707 911 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 BCAR3O75815 825 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 PPP2R1AP30153 589 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 PPP2R5EQ16537 467 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 TADA2BQ86TJ2 420 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 ARHGAP6O43182 974 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 GLRX3O76003 335 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 ZC3H6P61129 1189 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 SPAG5Q96R06 1193 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 HPDP32754 393 aaPredicted RBP11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 TRAF1Q13077 416 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 ARHGAP18Q8N392 663 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 CUL5Q93034 780 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 PAK2Q13177 524 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 FRMD4BQ9Y2L6 1034 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 A0A087WZG4 1122 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 DRC3Q9H069 523 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 PPP1R9AQ9ULJ8 1098 aa11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 UTP11Q9Y3A2 253 aaKnown RBP11.58□□□□□ -0.56
SPTBN1-201ENST00000333896 TRIM68Q6AZZ1 485 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 EEF2P13639 858 aaKnown RBP11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 PPP1R7Q15435 360 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 MPHOSPH6Q99547 160 aaKnown RBP11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 RAD51AP2Q09MP3 1159 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 MRPL46Q9H2W6 279 aaKnown RBP11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 AIDAQ96BJ3 306 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 SCINQ9Y6U3 715 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 E7EVH7 732 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 OPHN1O60890 802 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 RHOXF2BP0C7M4 288 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 SKIP12755 728 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 SSRP1Q08945 709 aaKnown RBP11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 PPP1R21Q6ZMI0 780 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 RHOXF2Q9BQY4 288 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 ZNF287Q9HBT7 754 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 SPECC1L-ADORA2AF8WAN1 911 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 HVCN1Q96D96 273 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 LRRC27Q9C0I9 530 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 RALGAPBQ86X10 1494 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 TTC21AQ8NDW8 1320 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 GJB2P29033 226 aa11.57□□□□□ -0.56
SPTBN1-201ENST00000333896 FAM169AQ9Y6X4 670 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 KAT6AQ92794 2004 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 TLDC2A0PJX2 215 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 MYO1CO00159 1063 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 GAS8O95995 478 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 MYL6BP14649 208 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 AMOTQ4VCS5 1084 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 ERBINQ96RT1 1412 aa11.56□□□□□ -0.56
SPTBN1-201ENST00000333896 HGSO14964 777 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms