RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SDF4Q9BRK5 362 aa21.03■□□□□ 0.96
PKP3-201ENST00000331563 OSBPL5Q9H0X9 879 aaPredicted RBP21.03■□□□□ 0.96
PKP3-201ENST00000331563 CEP83Q9Y592 693 aa21.03■□□□□ 0.96
PKP3-201ENST00000331563 KAT6BQ8WYB5 2073 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 HOXB7P09629 217 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 PDIA6Q15084 440 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 ARMCX5Q6P1M9 558 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 NBPF11Q86T75 865 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 GPATCH3Q96I76 525 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 FAM227BQ96M60 508 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 XPO4Q9C0E2 1151 aaKnown RBP21.02■□□□□ 0.96
PKP3-201ENST00000331563 EVCP57679 992 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 CABP4P57796 275 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 EVA1CP58658 441 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 FTOQ9C0B1 505 aaKnown RBP eCLIP21.02■□□□□ 0.96
PKP3-201ENST00000331563 CAMTA1Q9Y6Y1 1673 aa21.02■□□□□ 0.96
PKP3-201ENST00000331563 CACNA1FO60840 1977 aa21.02■□□□□ 0.95
PKP3-201ENST00000331563 A0A1B0GUL7 405 aa21.01■□□□□ 0.95
PKP3-201ENST00000331563 IFIT2P09913 472 aaKnown RBP21.01■□□□□ 0.95
PKP3-201ENST00000331563 RESTQ13127 1097 aa21.01■□□□□ 0.95
PKP3-201ENST00000331563 RRP15Q9Y3B9 282 aaKnown RBP21.01■□□□□ 0.95
PKP3-201ENST00000331563 CCDC172P0C7W6 258 aa21.01■□□□□ 0.95
PKP3-201ENST00000331563 RPS6KB1P23443 525 aa21.01■□□□□ 0.95
PKP3-201ENST00000331563 HSP90AB4PQ58FF6 505 aa21.01■□□□□ 0.95
PKP3-201ENST00000331563 TTC41PQ6P2S7 1318 aa21.01■□□□□ 0.95
PKP3-201ENST00000331563 TPM1P09493 284 aa21■□□□□ 0.95
PKP3-201ENST00000331563 GOLPH3LQ9H4A5 285 aa21■□□□□ 0.95
PKP3-201ENST00000331563 ECHDC1Q9NTX5 307 aa21■□□□□ 0.95
PKP3-201ENST00000331563 C9orf78Q9NZ63 289 aaPredicted RBP21■□□□□ 0.95
PKP3-201ENST00000331563 ME1P48163 572 aa21■□□□□ 0.95
PKP3-201ENST00000331563 POLA2Q14181 598 aa21■□□□□ 0.95
PKP3-201ENST00000331563 TTC5Q8N0Z6 440 aa21■□□□□ 0.95
PKP3-201ENST00000331563 KCNB2Q92953 911 aa21■□□□□ 0.95
PKP3-201ENST00000331563 DRC1Q96MC2 740 aa21■□□□□ 0.95
PKP3-201ENST00000331563 SASH3O75995 380 aa21■□□□□ 0.95
PKP3-201ENST00000331563 TUBB4AP04350 444 aa21■□□□□ 0.95
PKP3-201ENST00000331563 DCAF5Q96JK2 942 aa21■□□□□ 0.95
PKP3-201ENST00000331563 ZSCAN16Q9H4T2 348 aaPredicted RBP21■□□□□ 0.95
PKP3-201ENST00000331563 HEG1Q9ULI3 1381 aa20.99■□□□□ 0.95
PKP3-201ENST00000331563 PTCD1O75127 700 aaKnown RBP20.99■□□□□ 0.95
PKP3-201ENST00000331563 TOB2Q14106 344 aaPredicted RBP20.99■□□□□ 0.95
PKP3-201ENST00000331563 COPS6Q7L5N1 327 aa20.99■□□□□ 0.95
PKP3-201ENST00000331563 FSIP1Q8NA03 581 aa20.99■□□□□ 0.95
PKP3-201ENST00000331563 EFCAB8A8MWE9 144 aa20.99■□□□□ 0.95
PKP3-201ENST00000331563 NMIQ13287 307 aaPredicted RBP20.99■□□□□ 0.95
PKP3-201ENST00000331563 NOM1Q5C9Z4 860 aaKnown RBP20.99■□□□□ 0.95
PKP3-201ENST00000331563 FBXO18Q8NFZ0 1043 aa20.99■□□□□ 0.95
PKP3-201ENST00000331563 GOLGA5Q8TBA6 731 aa20.99■□□□□ 0.95
PKP3-201ENST00000331563 MAP4K1Q92918 833 aa20.99■□□□□ 0.95
PKP3-201ENST00000331563 EVI5LQ96CN4 794 aa20.99■□□□□ 0.95
PKP3-201ENST00000331563 SRRTQ9BXP5 876 aaKnown RBP20.99■□□□□ 0.95
PKP3-201ENST00000331563 ARFGAP3Q9NP61 516 aa20.99■□□□□ 0.95
PKP3-201ENST00000331563 WDR17Q8IZU2 1322 aa20.99■□□□□ 0.95
PKP3-201ENST00000331563 TADA3O75528 432 aa20.98■□□□□ 0.95
PKP3-201ENST00000331563 TBC1D8O95759 1140 aa20.98■□□□□ 0.95
PKP3-201ENST00000331563 CCDC158Q5M9N0 1113 aa20.98■□□□□ 0.95
PKP3-201ENST00000331563 KSR2Q6VAB6 950 aa20.98■□□□□ 0.95
PKP3-201ENST00000331563 XAGE3Q8WTP9 111 aa20.98■□□□□ 0.95
PKP3-201ENST00000331563 PA2G4Q9UQ80 394 aaKnown RBP20.98■□□□□ 0.95
PKP3-201ENST00000331563 TAF6LQ9Y6J9 622 aa20.98■□□□□ 0.95
PKP3-201ENST00000331563 CCP110O43303 1012 aa20.98■□□□□ 0.95
PKP3-201ENST00000331563 TTC31Q49AM3 519 aaPredicted RBP20.98■□□□□ 0.95
PKP3-201ENST00000331563 RIC3Q7Z5B4 369 aa20.98■□□□□ 0.95
PKP3-201ENST00000331563 ZCRB1Q8TBF4 217 aaKnown RBP20.98■□□□□ 0.95
PKP3-201ENST00000331563 CPDO75976 1380 aa20.98■□□□□ 0.95
PKP3-201ENST00000331563 ATP8B1O43520 1251 aa20.97■□□□□ 0.95
PKP3-201ENST00000331563 LRRFIP1Q32MZ4 808 aaKnown RBP20.97■□□□□ 0.95
PKP3-201ENST00000331563 CC2D1AQ6P1N0 951 aaPredicted RBP20.97■□□□□ 0.95
PKP3-201ENST00000331563 DDX21Q9NR30 783 aaKnown RBP eCLIP20.97■□□□□ 0.95
PKP3-201ENST00000331563 PHLPP2Q6ZVD8 1323 aa20.97■□□□□ 0.95
PKP3-201ENST00000331563 FAM160A1Q05DH4 1040 aa20.97■□□□□ 0.95
PKP3-201ENST00000331563 CARD10Q9BWT7 1032 aa20.97■□□□□ 0.95
PKP3-201ENST00000331563 DEF6Q9H4E7 631 aa20.96■□□□□ 0.95
PKP3-201ENST00000331563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.96■□□□□ 0.95
PKP3-201ENST00000331563 ADAM21Q9UKJ8 722 aa20.96■□□□□ 0.95
PKP3-201ENST00000331563 BIN1O00499 593 aa20.96■□□□□ 0.95
PKP3-201ENST00000331563 ATP2B1P20020 1258 aa20.96■□□□□ 0.95
PKP3-201ENST00000331563 LEKR1Q6ZMV7 388 aa20.96■□□□□ 0.95
PKP3-201ENST00000331563 PLEKHG2Q9H7P9 1386 aa20.95■□□□□ 0.95
PKP3-201ENST00000331563 TSGA10IPQ3SY00 556 aa20.95■□□□□ 0.94
PKP3-201ENST00000331563 AACSQ86V21 672 aa20.95■□□□□ 0.94
PKP3-201ENST00000331563 PACS2Q86VP3 889 aa20.95■□□□□ 0.94
PKP3-201ENST00000331563 BTG4Q9NY30 223 aa20.95■□□□□ 0.94
PKP3-201ENST00000331563 SAMD1Q6SPF0 538 aaPredicted RBP20.95■□□□□ 0.94
PKP3-201ENST00000331563 CRYBG1Q9Y4K1 1723 aa20.95■□□□□ 0.94
PKP3-201ENST00000331563 DPCR1Q3MIW9 517 aa20.94■□□□□ 0.94
PKP3-201ENST00000331563 FSD1Q9BTV5 496 aa20.94■□□□□ 0.94
PKP3-201ENST00000331563 UTP14AQ9BVJ6 771 aaKnown RBP20.94■□□□□ 0.94
PKP3-201ENST00000331563 SIL1Q9H173 461 aa20.94■□□□□ 0.94
PKP3-201ENST00000331563 ATP5J2-PTCD1G3V325 749 aa20.94■□□□□ 0.94
PKP3-201ENST00000331563 IGKV5-2P06315 115 aa20.94■□□□□ 0.94
PKP3-201ENST00000331563 SART3Q15020 963 aaKnown RBP20.94■□□□□ 0.94
PKP3-201ENST00000331563 UBXN6Q9BZV1 441 aa20.94■□□□□ 0.94
PKP3-201ENST00000331563 RCOR1Q9UKL0 485 aa20.94■□□□□ 0.94
PKP3-201ENST00000331563 PPFIA3O75145 1194 aa20.93■□□□□ 0.94
PKP3-201ENST00000331563 KLHDC4Q8TBB5 520 aa20.93■□□□□ 0.94
PKP3-201ENST00000331563 USP28Q96RU2 1077 aa20.93■□□□□ 0.94
PKP3-201ENST00000331563 MYD88Q99836 296 aa20.93■□□□□ 0.94
PKP3-201ENST00000331563 HIP1O00291 1037 aa20.93■□□□□ 0.94
PKP3-201ENST00000331563 LMOD1P29536 600 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms