RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SPATA31A1Q5TZJ5 1347 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 EXOC5O00471 708 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 PPFIA3O75145 1194 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 GUCY1B3Q02153 619 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 TTLL5Q6EMB2 1281 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 OSBP2Q969R2 916 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 CEP126Q9P2H0 1117 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 A0A0G2JS52 829 aa17.97■□□□□ 0.47
BRCC3-201ENST00000330045 KINO60870 393 aaKnown RBP17.97■□□□□ 0.47
BRCC3-201ENST00000330045 ME1P48163 572 aa17.97■□□□□ 0.47
BRCC3-201ENST00000330045 FKBP4Q02790 459 aaKnown RBP eCLIP17.97■□□□□ 0.47
BRCC3-201ENST00000330045 SARM1Q6SZW1 724 aa17.97■□□□□ 0.47
BRCC3-201ENST00000330045 ENGASEQ8NFI3 743 aa17.97■□□□□ 0.47
BRCC3-201ENST00000330045 SLC4A9Q96Q91 983 aa17.97■□□□□ 0.47
BRCC3-201ENST00000330045 CCDC94Q9BW85 323 aaPredicted RBP17.97■□□□□ 0.47
BRCC3-201ENST00000330045 ZNF330Q9Y3S2 320 aaPredicted RBP17.97■□□□□ 0.47
BRCC3-201ENST00000330045 CARMIL3Q8ND23 1372 aa17.97■□□□□ 0.47
BRCC3-201ENST00000330045 FAM160A1Q05DH4 1040 aa17.97■□□□□ 0.47
BRCC3-201ENST00000330045 LRRFIP1Q32MZ4 808 aaKnown RBP17.97■□□□□ 0.47
BRCC3-201ENST00000330045 ILDR1Q86SU0 546 aaPredicted RBP17.97■□□□□ 0.47
BRCC3-201ENST00000330045 DNAJC10Q8IXB1 793 aa17.97■□□□□ 0.47
BRCC3-201ENST00000330045 FBXL16Q8N461 479 aa17.97■□□□□ 0.47
BRCC3-201ENST00000330045 EVCP57679 992 aa17.96■□□□□ 0.47
BRCC3-201ENST00000330045 CCDC158Q5M9N0 1113 aa17.96■□□□□ 0.47
BRCC3-201ENST00000330045 FSIP1Q8NA03 581 aa17.96■□□□□ 0.47
BRCC3-201ENST00000330045 CACTINQ8WUQ7 758 aaKnown RBP17.96■□□□□ 0.47
BRCC3-201ENST00000330045 CTNNA3Q9UI47 895 aa17.96■□□□□ 0.47
BRCC3-201ENST00000330045 NRAPQ86VF7 1730 aa17.96■□□□□ 0.47
BRCC3-201ENST00000330045 ITGB4P16144 1822 aa17.96■□□□□ 0.46
BRCC3-201ENST00000330045 BECN2A8MW95 431 aa17.95■□□□□ 0.46
BRCC3-201ENST00000330045 FDPSP14324 419 aaKnown RBP17.95■□□□□ 0.46
BRCC3-201ENST00000330045 CCDC57Q2TAC2 916 aa17.95■□□□□ 0.46
BRCC3-201ENST00000330045 CCDC144BQ3MJ40 725 aa17.95■□□□□ 0.46
BRCC3-201ENST00000330045 GORABQ5T7V8 394 aa17.95■□□□□ 0.46
BRCC3-201ENST00000330045 CCDC144CPQ8IYA2 1237 aa17.95■□□□□ 0.46
BRCC3-201ENST00000330045 ACSBG1Q96GR2 724 aa17.95■□□□□ 0.46
BRCC3-201ENST00000330045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.95■□□□□ 0.46
BRCC3-201ENST00000330045 TTC39AQ5SRH9 613 aa17.95■□□□□ 0.46
BRCC3-201ENST00000330045 MRFAP1L1Q96HT8 127 aa17.95■□□□□ 0.46
BRCC3-201ENST00000330045 C8orf37Q96NL8 207 aa17.95■□□□□ 0.46
BRCC3-201ENST00000330045 ANO10Q9NW15 660 aa17.95■□□□□ 0.46
BRCC3-201ENST00000330045 IMMTQ16891 758 aaKnown RBP17.94■□□□□ 0.46
BRCC3-201ENST00000330045 WASHC4Q2M389 1173 aa17.94■□□□□ 0.46
BRCC3-201ENST00000330045 C16orf45Q96MC5 204 aaPredicted RBP17.94■□□□□ 0.46
BRCC3-201ENST00000330045 AKAP2Q9Y2D5 859 aa17.94■□□□□ 0.46
BRCC3-201ENST00000330045 ZFYP08048 801 aaPredicted RBP17.94■□□□□ 0.46
BRCC3-201ENST00000330045 GPHNQ9NQX3 736 aaPredicted RBP17.94■□□□□ 0.46
BRCC3-201ENST00000330045 RTEL1Q9NZ71 1219 aa17.94■□□□□ 0.46
BRCC3-201ENST00000330045 PCDHA7Q9UN72 937 aa17.94■□□□□ 0.46
BRCC3-201ENST00000330045 CTIFO43310 598 aaKnown RBP17.93■□□□□ 0.46
BRCC3-201ENST00000330045 XAGE2Q96GT9 111 aa17.93■□□□□ 0.46
BRCC3-201ENST00000330045 ADORA1P30542 326 aa17.93■□□□□ 0.46
BRCC3-201ENST00000330045 HAND2P61296 217 aa17.93■□□□□ 0.46
BRCC3-201ENST00000330045 ADALQ6DHV7 355 aa17.93■□□□□ 0.46
BRCC3-201ENST00000330045 MARCH10Q8NA82 808 aaPredicted RBP17.93■□□□□ 0.46
BRCC3-201ENST00000330045 MRPS27Q92552 414 aaKnown RBP17.93■□□□□ 0.46
BRCC3-201ENST00000330045 ISCA1Q9BUE6 129 aa17.93■□□□□ 0.46
BRCC3-201ENST00000330045 FBXO3Q9UK99 471 aa17.93■□□□□ 0.46
BRCC3-201ENST00000330045 NWD2Q9ULI1 1742 aa17.93■□□□□ 0.46
BRCC3-201ENST00000330045 FOXP2O15409 715 aa17.92■□□□□ 0.46
BRCC3-201ENST00000330045 FGAP02671 866 aa17.92■□□□□ 0.46
BRCC3-201ENST00000330045 TNNT1P13805 278 aa17.92■□□□□ 0.46
BRCC3-201ENST00000330045 LRRC8AQ8IWT6 810 aa17.92■□□□□ 0.46
BRCC3-201ENST00000330045 DHX40Q8IX18 779 aaKnown RBP17.92■□□□□ 0.46
BRCC3-201ENST00000330045 BCL9O00512 1426 aa17.92■□□□□ 0.46
BRCC3-201ENST00000330045 SPATA31A5Q5VU36 1347 aa17.92■□□□□ 0.46
BRCC3-201ENST00000330045 SPATA31A7Q8IWB4 1347 aa17.92■□□□□ 0.46
BRCC3-201ENST00000330045 DDB1Q16531 1140 aa17.92■□□□□ 0.46
BRCC3-201ENST00000330045 FMR1NBQ8N0W7 255 aaPredicted RBP17.92■□□□□ 0.46
BRCC3-201ENST00000330045 WNK3Q9BYP7 1800 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 A0A087WWV3 80 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 PRC1O43663 620 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
BRCC3-201ENST00000330045 NEMFO60524 1076 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 TCIRG1Q13488 830 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 CEP57L1Q8IYX8 460 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 C8orf76Q96K31 380 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 SLIT2O94813 1529 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 A0A1W2PQ27 194 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 A0A1W2PQ64 194 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 A0A1W2PQD8 194 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 TPD52L1Q16890 204 aaPredicted RBP17.91■□□□□ 0.46
BRCC3-201ENST00000330045 OTUD7BQ6GQQ9 843 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 LINC00301Q8NCQ3 95 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 SDF4Q9BRK5 362 aa17.91■□□□□ 0.46
BRCC3-201ENST00000330045 KLF18A0A0U1RQI7 1052 aa17.9■□□□□ 0.46
BRCC3-201ENST00000330045 A0A1B0GVL5 298 aa17.9■□□□□ 0.46
BRCC3-201ENST00000330045 SMTNL1A8MU46 457 aa17.9■□□□□ 0.46
BRCC3-201ENST00000330045 SF3A1Q15459 793 aaKnown RBP17.9■□□□□ 0.46
BRCC3-201ENST00000330045 FAM98CQ17RN3 349 aaKnown RBP17.9■□□□□ 0.46
BRCC3-201ENST00000330045 ANKRD7Q92527 254 aa17.9■□□□□ 0.46
BRCC3-201ENST00000330045 APPBP2Q92624 585 aa17.9■□□□□ 0.46
BRCC3-201ENST00000330045 ERCC4Q92889 916 aaPredicted RBP17.9■□□□□ 0.46
BRCC3-201ENST00000330045 NAT10Q9H0A0 1025 aaKnown RBP17.9■□□□□ 0.46
BRCC3-201ENST00000330045 ZAP70P43403 619 aa17.9■□□□□ 0.46
BRCC3-201ENST00000330045 SCARF1Q14162 830 aa17.9■□□□□ 0.46
BRCC3-201ENST00000330045 STK38Q15208 465 aa17.9■□□□□ 0.46
BRCC3-201ENST00000330045 MB21D2Q8IYB1 491 aaPredicted RBP17.9■□□□□ 0.46
BRCC3-201ENST00000330045 PUS7LQ9H0K6 701 aaKnown RBP17.9■□□□□ 0.46
BRCC3-201ENST00000330045 CLIC4Q9Y696 253 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms