RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 IQSEC3Q9UPP2 1182 aaPredicted RBP24.17■■□□□ 1.46
RIPPLY3-201ENST00000329553 POLRMTO00411 1230 aaKnown RBP24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 FOXP2O15409 715 aa24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 PDE6AP16499 860 aa24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 KRT32Q14532 448 aa24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 BLOC1S2Q6QNY1 142 aa24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 ANKRD2Q9GZV1 360 aa24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 ST5P78524 1137 aa24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 GRAPQ13588 217 aa24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 GRAPLQ8TC17 118 aaPredicted RBP24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 INTS4Q96HW7 963 aaKnown RBP24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 FAM84BQ96KN1 310 aaPredicted RBP24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 ZNF532Q9HCE3 1301 aa24.16■■□□□ 1.46
RIPPLY3-201ENST00000329553 A0A0G2JLW4 131 aa24.15■■□□□ 1.46
RIPPLY3-201ENST00000329553 TCRBV5S4A2TA0A5A2 114 aa24.15■■□□□ 1.46
RIPPLY3-201ENST00000329553 GPAA1O43292 621 aa24.15■■□□□ 1.46
RIPPLY3-201ENST00000329553 RPS6KB1P23443 525 aa24.15■■□□□ 1.46
RIPPLY3-201ENST00000329553 CAVIN4Q5BKX8 364 aa24.15■■□□□ 1.46
RIPPLY3-201ENST00000329553 CLEC17AQ6ZS10 378 aa24.15■■□□□ 1.46
RIPPLY3-201ENST00000329553 PTMSP20962 102 aa24.14■■□□□ 1.46
RIPPLY3-201ENST00000329553 KLRK1P26718 216 aa24.14■■□□□ 1.46
RIPPLY3-201ENST00000329553 NEK1Q96PY6 1258 aa24.14■■□□□ 1.46
RIPPLY3-201ENST00000329553 GNL3LQ9NVN8 582 aaKnown RBP24.14■■□□□ 1.46
RIPPLY3-201ENST00000329553 ISY1Q9ULR0 285 aaKnown RBP24.14■■□□□ 1.46
RIPPLY3-201ENST00000329553 MAP3K12Q12852 859 aa24.14■■□□□ 1.45
RIPPLY3-201ENST00000329553 CRY2Q49AN0 593 aa24.14■■□□□ 1.45
RIPPLY3-201ENST00000329553 TCEANC2Q96MN5 208 aa24.14■■□□□ 1.45
RIPPLY3-201ENST00000329553 TTLL5Q6EMB2 1281 aa24.13■■□□□ 1.45
RIPPLY3-201ENST00000329553 STOX1Q6ZVD7 989 aa24.13■■□□□ 1.45
RIPPLY3-201ENST00000329553 SLC51AQ86UW1 340 aa24.13■■□□□ 1.45
RIPPLY3-201ENST00000329553 MRE11P49959 708 aa24.12■■□□□ 1.45
RIPPLY3-201ENST00000329553 SKOR2Q2VWA4 1001 aaPredicted RBP24.12■■□□□ 1.45
RIPPLY3-201ENST00000329553 FBXO33Q7Z6M2 555 aa24.12■■□□□ 1.45
RIPPLY3-201ENST00000329553 VPS37DQ86XT2 251 aa24.12■■□□□ 1.45
RIPPLY3-201ENST00000329553 MAGEB6Q8N7X4 407 aa24.12■■□□□ 1.45
RIPPLY3-201ENST00000329553 RPGRQ92834 1020 aaKnown RBP24.12■■□□□ 1.45
RIPPLY3-201ENST00000329553 TNS1Q9HBL0 1735 aaKnown RBP24.12■■□□□ 1.45
RIPPLY3-201ENST00000329553 DOCK2Q92608 1830 aa24.12■■□□□ 1.45
RIPPLY3-201ENST00000329553 LARGE1O95461 756 aa24.12■■□□□ 1.45
RIPPLY3-201ENST00000329553 PKP1Q13835 747 aa24.12■■□□□ 1.45
RIPPLY3-201ENST00000329553 FGAP02671 866 aa24.11■■□□□ 1.45
RIPPLY3-201ENST00000329553 NUCB2P80303 420 aa24.11■■□□□ 1.45
RIPPLY3-201ENST00000329553 NLGN1Q8N2Q7 840 aa24.11■■□□□ 1.45
RIPPLY3-201ENST00000329553 FBXO41Q8TF61 875 aa24.11■■□□□ 1.45
RIPPLY3-201ENST00000329553 ALDH8A1Q9H2A2 487 aaPredicted RBP24.11■■□□□ 1.45
RIPPLY3-201ENST00000329553 CTNNA3Q9UI47 895 aa24.1■■□□□ 1.45
RIPPLY3-201ENST00000329553 FLAD1Q8NFF5 587 aa24.1■■□□□ 1.45
RIPPLY3-201ENST00000329553 LRP2BPQ9P2M1 347 aa24.1■■□□□ 1.45
RIPPLY3-201ENST00000329553 ZSCAN31Q96LW9 406 aaPredicted RBP24.09■■□□□ 1.45
RIPPLY3-201ENST00000329553 PANK2Q9BZ23 570 aa24.09■■□□□ 1.45
RIPPLY3-201ENST00000329553 TPCN1Q9ULQ1 816 aa24.09■■□□□ 1.45
RIPPLY3-201ENST00000329553 COL1A1P02452 1464 aaPredicted RBP24.09■■□□□ 1.45
RIPPLY3-201ENST00000329553 TOB2Q14106 344 aaPredicted RBP24.08■■□□□ 1.45
RIPPLY3-201ENST00000329553 ME3Q16798 604 aa24.08■■□□□ 1.45
RIPPLY3-201ENST00000329553 TXNRD3Q86VQ6 643 aa24.08■■□□□ 1.45
RIPPLY3-201ENST00000329553 DENND2AQ9ULE3 1009 aa24.08■■□□□ 1.45
RIPPLY3-201ENST00000329553 E7EWF7 191 aa24.08■■□□□ 1.45
RIPPLY3-201ENST00000329553 HIBADHP31937 336 aaKnown RBP24.08■■□□□ 1.45
RIPPLY3-201ENST00000329553 RBM17Q96I25 401 aaKnown RBP24.08■■□□□ 1.45
RIPPLY3-201ENST00000329553 STRBPQ96SI9 672 aaKnown RBP24.08■■□□□ 1.45
RIPPLY3-201ENST00000329553 ANKIB1Q9P2G1 1089 aa24.08■■□□□ 1.45
RIPPLY3-201ENST00000329553 ABCF2Q9UG63 623 aa24.08■■□□□ 1.45
RIPPLY3-201ENST00000329553 PNPLA7Q6ZV29 1317 aa24.07■■□□□ 1.44
RIPPLY3-201ENST00000329553 KLRG2A4D1S0 409 aaPredicted RBP24.07■■□□□ 1.44
RIPPLY3-201ENST00000329553 ANKRD1Q15327 319 aa24.07■■□□□ 1.44
RIPPLY3-201ENST00000329553 AIDAQ96BJ3 306 aa24.07■■□□□ 1.44
RIPPLY3-201ENST00000329553 SH2B1Q9NRF2 756 aaPredicted RBP24.07■■□□□ 1.44
RIPPLY3-201ENST00000329553 IRS2Q9Y4H2 1338 aa24.07■■□□□ 1.44
RIPPLY3-201ENST00000329553 GRPEL1Q9HAV7 217 aa24.07■■□□□ 1.44
RIPPLY3-201ENST00000329553 ZDHHC9Q9Y397 364 aa24.07■■□□□ 1.44
RIPPLY3-201ENST00000329553 HOXA10P31260 410 aaPredicted RBP24.06■■□□□ 1.44
RIPPLY3-201ENST00000329553 HAND2P61296 217 aa24.06■■□□□ 1.44
RIPPLY3-201ENST00000329553 IMMTQ16891 758 aaKnown RBP24.06■■□□□ 1.44
RIPPLY3-201ENST00000329553 LAMA4Q16363 1823 aa24.06■■□□□ 1.44
RIPPLY3-201ENST00000329553 HMGB1P09429 215 aaKnown RBP24.06■■□□□ 1.44
RIPPLY3-201ENST00000329553 SEMA3EO15041 775 aa24.05■■□□□ 1.44
RIPPLY3-201ENST00000329553 EZH2Q15910 746 aaKnown RBP24.05■■□□□ 1.44
RIPPLY3-201ENST00000329553 DHX32Q7L7V1 743 aaKnown RBP24.05■■□□□ 1.44
RIPPLY3-201ENST00000329553 CCDC83Q8IWF9 413 aa24.05■■□□□ 1.44
RIPPLY3-201ENST00000329553 ANO8Q9HCE9 1232 aaPredicted RBP24.05■■□□□ 1.44
RIPPLY3-201ENST00000329553 LEMD3Q9Y2U8 911 aa24.05■■□□□ 1.44
RIPPLY3-201ENST00000329553 MBD4O95243 580 aa24.04■■□□□ 1.44
RIPPLY3-201ENST00000329553 EN1Q05925 392 aaPredicted RBP24.04■■□□□ 1.44
RIPPLY3-201ENST00000329553 ST3GAL1Q11201 340 aa24.04■■□□□ 1.44
RIPPLY3-201ENST00000329553 Q6ZUG5 572 aa24.04■■□□□ 1.44
RIPPLY3-201ENST00000329553 XDHP47989 1333 aa24.04■■□□□ 1.44
RIPPLY3-201ENST00000329553 APPP05067 770 aa24.04■■□□□ 1.44
RIPPLY3-201ENST00000329553 NECAB1Q8N987 351 aa24.04■■□□□ 1.44
RIPPLY3-201ENST00000329553 CAMKK2Q96RR4 588 aa24.04■■□□□ 1.44
RIPPLY3-201ENST00000329553 RGPD3A6NKT7 1758 aaPredicted RBP24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 RGPD4Q7Z3J3 1758 aa24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 BBOX1O75936 387 aa24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 EXOSC10Q01780 885 aaKnown RBP24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 LRRC2Q9BYS8 371 aa24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 ARMT1Q9H993 441 aa24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 RRAGDQ9NQL2 400 aaPredicted RBP24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 RAI14Q9P0K7 980 aa24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 MMP10P09238 476 aa24.03■■□□□ 1.44
RIPPLY3-201ENST00000329553 GPSM2P81274 684 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms