RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 C15orf52Q6ZUT6 534 aaKnown RBP18.52■□□□□ 0.56
PRPF3-201ENST00000324862 ZNF804AQ7Z570 1209 aa18.52■□□□□ 0.56
PRPF3-201ENST00000324862 ZNF277Q9NRM2 450 aaPredicted RBP18.52■□□□□ 0.56
PRPF3-201ENST00000324862 ABCF2Q9UG63 623 aa18.52■□□□□ 0.56
PRPF3-201ENST00000324862 A0A0D9SFI3 127 aa18.52■□□□□ 0.55
PRPF3-201ENST00000324862 TDRD7Q8NHU6 1098 aaKnown RBP18.52■□□□□ 0.55
PRPF3-201ENST00000324862 TSHZ2Q9NRE2 1034 aa18.52■□□□□ 0.55
PRPF3-201ENST00000324862 NMIQ13287 307 aaPredicted RBP18.51■□□□□ 0.55
PRPF3-201ENST00000324862 RTFDC1Q9BY42 306 aaPredicted RBP18.51■□□□□ 0.55
PRPF3-201ENST00000324862 GRIK5Q16478 980 aa18.51■□□□□ 0.55
PRPF3-201ENST00000324862 BRCA1P38398 1863 aaKnown RBP18.5■□□□□ 0.55
PRPF3-201ENST00000324862 MXD3Q9BW11 206 aa18.5■□□□□ 0.55
PRPF3-201ENST00000324862 DIAPH3Q9NSV4 1193 aa18.5■□□□□ 0.55
PRPF3-201ENST00000324862 DENND2AQ9ULE3 1009 aa18.5■□□□□ 0.55
PRPF3-201ENST00000324862 CC2D2BQ6DHV5 1058 aa18.49■□□□□ 0.55
PRPF3-201ENST00000324862 CCDC129Q6ZRS4 1044 aa18.49■□□□□ 0.55
PRPF3-201ENST00000324862 ESYT1Q9BSJ8 1104 aa18.49■□□□□ 0.55
PRPF3-201ENST00000324862 NFKBIEO00221 500 aa18.49■□□□□ 0.55
PRPF3-201ENST00000324862 PPIP5K2O43314 1243 aa18.49■□□□□ 0.55
PRPF3-201ENST00000324862 IL1R1P14778 569 aa18.49■□□□□ 0.55
PRPF3-201ENST00000324862 PRDX5P30044 214 aa18.49■□□□□ 0.55
PRPF3-201ENST00000324862 FBXW7Q969H0 707 aa18.49■□□□□ 0.55
PRPF3-201ENST00000324862 GTF2IP78347 998 aa18.48■□□□□ 0.55
PRPF3-201ENST00000324862 RASSF7Q02833 373 aa18.48■□□□□ 0.55
PRPF3-201ENST00000324862 SLC9C2Q5TAH2 1124 aa18.48■□□□□ 0.55
PRPF3-201ENST00000324862 ZNF589Q86UQ0 364 aaPredicted RBP18.48■□□□□ 0.55
PRPF3-201ENST00000324862 RTKN2Q8IZC4 609 aa18.48■□□□□ 0.55
PRPF3-201ENST00000324862 EYA3Q99504 573 aa18.48■□□□□ 0.55
PRPF3-201ENST00000324862 COL4A5P29400 1685 aa18.48■□□□□ 0.55
PRPF3-201ENST00000324862 MYO5AQ9Y4I1 1855 aaKnown RBP18.48■□□□□ 0.55
PRPF3-201ENST00000324862 ZNF384Q8TF68 577 aa18.48■□□□□ 0.55
PRPF3-201ENST00000324862 LRP2BPQ9P2M1 347 aa18.48■□□□□ 0.55
PRPF3-201ENST00000324862 AK9Q5TCS8 1911 aa18.47■□□□□ 0.55
PRPF3-201ENST00000324862 KIAA2012Q0VF49 1180 aa18.47■□□□□ 0.55
PRPF3-201ENST00000324862 COA1Q9GZY4 146 aa18.47■□□□□ 0.55
PRPF3-201ENST00000324862 G3V3G9 751 aa18.47■□□□□ 0.55
PRPF3-201ENST00000324862 PRELPP51888 382 aa18.47■□□□□ 0.55
PRPF3-201ENST00000324862 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
PRPF3-201ENST00000324862 CASC1Q6TDU7 716 aa18.47■□□□□ 0.55
PRPF3-201ENST00000324862 MAGEB6Q8N7X4 407 aa18.47■□□□□ 0.55
PRPF3-201ENST00000324862 OSBP2Q969R2 916 aa18.47■□□□□ 0.55
PRPF3-201ENST00000324862 RNF113AO15541 343 aaKnown RBP18.46■□□□□ 0.55
PRPF3-201ENST00000324862 ECE2O60344 883 aa18.46■□□□□ 0.55
PRPF3-201ENST00000324862 TTF1Q15361 905 aaPredicted RBP18.46■□□□□ 0.55
PRPF3-201ENST00000324862 ADGRA1Q86SQ6 560 aa18.46■□□□□ 0.55
PRPF3-201ENST00000324862 PSMD1Q99460 953 aa18.46■□□□□ 0.55
PRPF3-201ENST00000324862 PUS7LQ9H0K6 701 aaKnown RBP18.46■□□□□ 0.55
PRPF3-201ENST00000324862 RAI14Q9P0K7 980 aa18.46■□□□□ 0.55
PRPF3-201ENST00000324862 YDJCA8MPS7 323 aa18.45■□□□□ 0.54
PRPF3-201ENST00000324862 SEMA3EO15041 775 aa18.45■□□□□ 0.54
PRPF3-201ENST00000324862 SGSM2O43147 1006 aa18.45■□□□□ 0.54
PRPF3-201ENST00000324862 PDE6AP16499 860 aa18.45■□□□□ 0.54
PRPF3-201ENST00000324862 CHD4Q14839 1912 aa18.45■□□□□ 0.54
PRPF3-201ENST00000324862 ZNF532Q9HCE3 1301 aa18.45■□□□□ 0.54
PRPF3-201ENST00000324862 M0R2C6 588 aa18.45■□□□□ 0.54
PRPF3-201ENST00000324862 TAOK3Q9H2K8 898 aa18.45■□□□□ 0.54
PRPF3-201ENST00000324862 ADD2P35612 726 aa18.44■□□□□ 0.54
PRPF3-201ENST00000324862 LARGE2Q8N3Y3 721 aa18.44■□□□□ 0.54
PRPF3-201ENST00000324862 TCRBV5S4A2TA0A5A2 114 aa18.44■□□□□ 0.54
PRPF3-201ENST00000324862 YBX3P16989 372 aaKnown RBP eCLIP18.44■□□□□ 0.54
PRPF3-201ENST00000324862 MFSD14BQ5SR56 506 aa18.44■□□□□ 0.54
PRPF3-201ENST00000324862 CERS5Q8N5B7 392 aa18.44■□□□□ 0.54
PRPF3-201ENST00000324862 ANO2Q9NQ90 1003 aa18.44■□□□□ 0.54
PRPF3-201ENST00000324862 ZMYM1Q5SVZ6 1142 aa18.43■□□□□ 0.54
PRPF3-201ENST00000324862 SOGA3Q5TF21 947 aa18.43■□□□□ 0.54
PRPF3-201ENST00000324862 TTLL5Q6EMB2 1281 aa18.43■□□□□ 0.54
PRPF3-201ENST00000324862 MAST3O60307 1309 aa18.43■□□□□ 0.54
PRPF3-201ENST00000324862 F8W031 263 aaPredicted RBP18.43■□□□□ 0.54
PRPF3-201ENST00000324862 PTH1RQ03431 593 aa18.43■□□□□ 0.54
PRPF3-201ENST00000324862 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
PRPF3-201ENST00000324862 SUPT20HQ8NEM7 779 aa18.43■□□□□ 0.54
PRPF3-201ENST00000324862 MECOMQ03112 1051 aa18.42■□□□□ 0.54
PRPF3-201ENST00000324862 DIXDC1Q155Q3 683 aa18.42■□□□□ 0.54
PRPF3-201ENST00000324862 VPS53Q5VIR6 699 aa18.42■□□□□ 0.54
PRPF3-201ENST00000324862 MIGA1Q8NAN2 632 aa18.42■□□□□ 0.54
PRPF3-201ENST00000324862 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.42■□□□□ 0.547e-7■■■□□ 15.1
PRPF3-201ENST00000324862 IARSP41252 1262 aaKnown RBP18.42■□□□□ 0.54
PRPF3-201ENST00000324862 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
PRPF3-201ENST00000324862 PODNQ7Z5L7 613 aa18.42■□□□□ 0.54
PRPF3-201ENST00000324862 WDR66Q8TBY9 1149 aa18.42■□□□□ 0.54
PRPF3-201ENST00000324862 NSUN4Q96CB9 384 aaKnown RBP18.42■□□□□ 0.54
PRPF3-201ENST00000324862 RAD17O75943 681 aa18.41■□□□□ 0.54
PRPF3-201ENST00000324862 ARHGAP27Q6ZUM4 889 aa18.41■□□□□ 0.54
PRPF3-201ENST00000324862 PDS5AQ29RF7 1337 aaKnown RBP18.41■□□□□ 0.54
PRPF3-201ENST00000324862 SCN9AQ15858 1988 aa18.41■□□□□ 0.54
PRPF3-201ENST00000324862 HIP1O00291 1037 aa18.41■□□□□ 0.54
PRPF3-201ENST00000324862 MCMDC2Q4G0Z9 681 aa18.41■□□□□ 0.54
PRPF3-201ENST00000324862 CYP7A1P22680 504 aa18.4■□□□□ 0.54
PRPF3-201ENST00000324862 GRIPAP1Q4V328 841 aa18.4■□□□□ 0.54
PRPF3-201ENST00000324862 APPBP2Q92624 585 aa18.4■□□□□ 0.54
PRPF3-201ENST00000324862 USP26Q9BXU7 913 aa18.4■□□□□ 0.54
PRPF3-201ENST00000324862 MYH13Q9UKX3 1938 aa18.4■□□□□ 0.54
PRPF3-201ENST00000324862 FAM205AQ6ZU69 1335 aa18.4■□□□□ 0.54
PRPF3-201ENST00000324862 RFX7Q2KHR2 1363 aa18.4■□□□□ 0.54
PRPF3-201ENST00000324862 LDHBP07195 334 aaKnown RBP18.4■□□□□ 0.54
PRPF3-201ENST00000324862 UBE3CQ15386 1083 aa18.4■□□□□ 0.54
PRPF3-201ENST00000324862 LSG1Q9H089 658 aaKnown RBP18.4■□□□□ 0.54
PRPF3-201ENST00000324862 RUFY2Q8WXA3 655 aa18.39■□□□□ 0.53
PRPF3-201ENST00000324862 FER1L6Q2WGJ9 1857 aa18.39■□□□□ 0.53
PRPF3-201ENST00000324862 SALL1Q9NSC2 1324 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms