RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 C6orf50Q9HD87 102 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 RBM28Q9NW13 759 aaKnown RBP12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 IP6K1Q92551 441 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 DCAF5Q96JK2 942 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 GOLGA6L10A0A0M3HER8 536 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 MACROD2A1Z1Q3 448 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 IRS4O14654 1257 aaPredicted RBP12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 SPECC1Q5M775 1068 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 FEZ1Q99689 392 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 NYXQ9GZU5 481 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 HOOK3Q86VS8 718 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 SIRT1Q96EB6 747 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 RRP36Q96EU6 259 aaKnown RBP12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 SBNO2Q9Y2G9 1366 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 SNX14Q9Y5W7 946 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 BICDL2A1A5D9 508 aa12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 KRT83P78385 493 aa12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 IFNKQ9P0W0 207 aa12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 ELP1O95163 1332 aa12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 CALML3P27482 149 aa12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 OTUD7AQ8TE49 926 aaPredicted RBP12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 BICD1Q96G01 975 aa12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 KIF24Q5T7B8 1368 aa12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 IBSPP21815 317 aaPredicted RBP12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 SELENOOQ9BVL4 669 aa12.4□□□□□ -0.42
SNRNP200-201ENST00000323853 TACC1O75410 805 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 UBXN1Q04323 297 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 PICALMQ13492 652 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 MIGA1Q8NAN2 632 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 ZNF622Q969S3 477 aaKnown RBP eCLIP12.39□□□□□ -0.437e-9■■□□□ 12.7
SNRNP200-201ENST00000323853 ARFGAP3Q9NP61 516 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 MAP3K19Q56UN5 1328 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 NCKAP5LQ9HCH0 1330 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 MCM7P33993 719 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 UBE4AQ14139 1066 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 CPA1P15085 419 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 TNNI3KQ59H18 835 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 FPGT-TNNI3KV9GXZ4 949 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 CHMP4BP1P59074 171 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 RBSNQ9H1K0 784 aa12.39□□□□□ -0.43
SNRNP200-201ENST00000323853 KIAA0753Q2KHM9 967 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 CCDC174Q6PII3 467 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 GTPBP4Q9BZE4 634 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 RASAL2Q9UJF2 1139 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 CCDC129Q6ZRS4 1044 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 DRC1Q96MC2 740 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 ARHGEF10O15013 1369 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 RXRAP19793 462 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 PUF60Q9UHX1 559 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 KRT13P13646 458 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 SPAG5Q96R06 1193 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 METTL22Q9BUU2 404 aaPredicted RBP12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 FAM160A1Q05DH4 1040 aa12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 RNF216Q9NWF9 866 aaPredicted RBP12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 ZHX1Q9UKY1 873 aaPredicted RBP12.38□□□□□ -0.43
SNRNP200-201ENST00000323853 SPECC1LQ69YQ0 1117 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 PLBD2Q8NHP8 589 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 DDX21Q9NR30 783 aaKnown RBP eCLIP12.37□□□□□ -0.439e-7■□□□□ 10.3
SNRNP200-201ENST00000323853 TRAF1Q13077 416 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 TRMT1LQ7Z2T5 733 aaKnown RBP12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 USP19O94966 1318 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 RNF123Q5XPI4 1314 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 F8W031 263 aaPredicted RBP12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 KARSQ15046 597 aaKnown RBP12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 CCDC155Q8N6L0 562 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 ARHGEF5Q12774 1597 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 OPA1O60313 960 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 SYT10Q6XYQ8 523 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 SMARCC2Q8TAQ2 1214 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 CCDC94Q9BW85 323 aaPredicted RBP12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 DMRT2Q9Y5R5 561 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 ZMYM3Q14202 1370 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 STX17P56962 302 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 CABLES1Q8TDN4 633 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 DDX12PQ92771 950 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 LLPHQ9BRT6 129 aaKnown RBP12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 ANKRD2Q9GZV1 360 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 CLSTN2Q9H4D0 955 aa12.37□□□□□ -0.43
SNRNP200-201ENST00000323853 KRT86O43790 486 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 GCP02774 474 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 CTNND2Q9UQB3 1225 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 PRPHP41219 470 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 LMBR1Q8WVP7 490 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 TTLL12Q14166 644 aaPredicted RBP12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 TSGA10Q9BZW7 698 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 HOXB7P09629 217 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 HELBQ8NG08 1087 aaPredicted RBP12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 MCM9Q9NXL9 1143 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.36□□□□□ -0.435e-6■□□□□ 10.3
SNRNP200-201ENST00000323853 V9GYY5 206 aaPredicted RBP12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 A0A1B0GVL5 298 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 MBD4O95243 580 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 TUBB4BP68371 445 aa12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 MAPK8IP2Q13387 824 aaPredicted RBP12.36□□□□□ -0.43
SNRNP200-201ENST00000323853 ZNF569Q5MCW4 686 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms