RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 GOLGA6L9A6NEM1 432 aa9.02□□□□□ -0.96
CD46-201ENST00000322875 KRT32Q14532 448 aa9.02□□□□□ -0.96
CD46-201ENST00000322875 PPM1EQ8WY54 764 aa9.02□□□□□ -0.96
CD46-201ENST00000322875 ZNF396Q96N95 335 aaPredicted RBP9.02□□□□□ -0.96
CD46-201ENST00000322875 AKAP2Q9Y2D5 859 aa9.02□□□□□ -0.96
CD46-201ENST00000322875 DDX60Q8IY21 1712 aaKnown RBP9.02□□□□□ -0.96
CD46-201ENST00000322875 ZNF142P52746 1687 aaPredicted RBP9.02□□□□□ -0.96
CD46-201ENST00000322875 A2ML1A8K2U0 1454 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 H3BQV1 296 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 CEBPZQ03701 1054 aaKnown RBP9.02□□□□□ -0.97
CD46-201ENST00000322875 IFFO2Q5TF58 517 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 ERC1Q8IUD2 1116 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 PDE11AQ9HCR9 933 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 INTS13Q9NVM9 706 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 MYO1BO43795 1136 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 ATP1A3P13637 1013 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 LEKR1Q6ZMV7 388 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 Q6ZUG5 572 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 GPATCH3Q96I76 525 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 TUBE1Q9UJT0 475 aa9.02□□□□□ -0.97
CD46-201ENST00000322875 LINC00301Q8NCQ3 95 aa9.01□□□□□ -0.97
CD46-201ENST00000322875 DHX58Q96C10 678 aa9.01□□□□□ -0.97
CD46-201ENST00000322875 NEK1Q96PY6 1258 aa9.01□□□□□ -0.97
CD46-201ENST00000322875 N4BP1O75113 896 aaKnown RBP9.01□□□□□ -0.97
CD46-201ENST00000322875 SASH1O94885 1247 aa9.01□□□□□ -0.97
CD46-201ENST00000322875 HDXQ7Z353 690 aa9.01□□□□□ -0.97
CD46-201ENST00000322875 SENP3Q9H4L4 574 aaPredicted RBP9.01□□□□□ -0.97
CD46-201ENST00000322875 VPS18Q9P253 973 aa9.01□□□□□ -0.97
CD46-201ENST00000322875 RFX7Q2KHR2 1363 aa9.01□□□□□ -0.97
CD46-201ENST00000322875 A0A1B0GVL5 298 aa9□□□□□ -0.97
CD46-201ENST00000322875 CUTAO60888 179 aa9□□□□□ -0.97
CD46-201ENST00000322875 IL17REQ8NFR9 667 aa9□□□□□ -0.97
CD46-201ENST00000322875 NECTIN2Q92692 538 aa9□□□□□ -0.97
CD46-201ENST00000322875 CEP89Q96ST8 783 aa9□□□□□ -0.97
CD46-201ENST00000322875 STX10O60499 249 aa9□□□□□ -0.97
CD46-201ENST00000322875 USP6P35125 1406 aa9□□□□□ -0.97
CD46-201ENST00000322875 ME1P48163 572 aa9□□□□□ -0.97
CD46-201ENST00000322875 SRGAP1Q7Z6B7 1085 aa9□□□□□ -0.97
CD46-201ENST00000322875 EFCAB13Q8IY85 973 aa9□□□□□ -0.97
CD46-201ENST00000322875 EAF2Q96CJ1 260 aaPredicted RBP9□□□□□ -0.97
CD46-201ENST00000322875 PNKPQ96T60 521 aa9□□□□□ -0.97
CD46-201ENST00000322875 CEMIPQ8WUJ3 1361 aa9□□□□□ -0.97
CD46-201ENST00000322875 PTPDC1A2A3K4 754 aa9□□□□□ -0.97
CD46-201ENST00000322875 POLR3EQ9NVU0 708 aa9□□□□□ -0.97
CD46-201ENST00000322875 FAN1Q9Y2M0 1017 aa9□□□□□ -0.97
CD46-201ENST00000322875 TMEM232C9JQI7 657 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 CBFA2T2O43439 604 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 LMOD1P29536 600 aaPredicted RBP8.99□□□□□ -0.97
CD46-201ENST00000322875 GNG11P61952 73 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 EXOSC10Q01780 885 aaKnown RBP8.99□□□□□ -0.97
CD46-201ENST00000322875 AXDND1Q5T1B0 1012 aaPredicted RBP8.99□□□□□ -0.97
CD46-201ENST00000322875 MMS22LQ6ZRQ5 1243 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 TOGARAM2Q6ZUX3 1019 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 TC2NQ8N9U0 490 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 FAM71BQ8TC56 605 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 DNAAF4Q8WXU2 420 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 SDF4Q9BRK5 362 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 MARF1Q9Y4F3 1742 aaKnown RBP8.99□□□□□ -0.97
CD46-201ENST00000322875 GNAT3A8MTJ3 354 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 POTEB2H3BUK9 544 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 YEATS4O95619 227 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 UBASH3AP57075 661 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 TUBB4BP68371 445 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 MCTP2Q6DN12 878 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 STOX1Q6ZVD7 989 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 AACSQ86V21 672 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 DRC1Q96MC2 740 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 EYA1Q99502 592 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 METP08581 1390 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 UTYO14607 1347 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 FAM237AA0A1B0GTK4 181 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 PPFIA4O75335 1185 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 ZNF202O95125 648 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 SLC3A2P08195 630 aaKnown RBP8.99□□□□□ -0.97
CD46-201ENST00000322875 CYP21A2P08686 494 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 FDPSP14324 419 aaKnown RBP8.99□□□□□ -0.97
CD46-201ENST00000322875 AARSP49588 968 aaKnown RBP eCLIP8.99□□□□□ -0.97
CD46-201ENST00000322875 CHMP4BP1P59074 171 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 GOLGA8FQ08AF8 430 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 GOLGA8DPQ0D2H9 430 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 TAF7Q15545 349 aaPredicted RBP8.99□□□□□ -0.97
CD46-201ENST00000322875 HDGFL1Q5TGJ6 251 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 TLR7Q9NYK1 1049 aaKnown RBP8.99□□□□□ -0.97
CD46-201ENST00000322875 FLT4P35916 1363 aa8.99□□□□□ -0.97
CD46-201ENST00000322875 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.98□□□□□ -0.97
CD46-201ENST00000322875 SLIT1O75093 1534 aa8.98□□□□□ -0.97
CD46-201ENST00000322875 ZNF609O15014 1411 aa8.98□□□□□ -0.97
CD46-201ENST00000322875 PTPRUQ92729 1446 aa8.98□□□□□ -0.97
CD46-201ENST00000322875 USP54Q70EL1 1684 aa8.98□□□□□ -0.97
CD46-201ENST00000322875 CARMIL3Q8ND23 1372 aa8.98□□□□□ -0.97
CD46-201ENST00000322875 PRPF6O94906 941 aaKnown RBP8.98□□□□□ -0.97
CD46-201ENST00000322875 HOXB7P09629 217 aa8.98□□□□□ -0.97
CD46-201ENST00000322875 FBXL16Q8N461 479 aa8.98□□□□□ -0.97
CD46-201ENST00000322875 FBXW7Q969H0 707 aa8.98□□□□□ -0.97
CD46-201ENST00000322875 BAG1Q99933 345 aaPredicted RBP8.98□□□□□ -0.97
CD46-201ENST00000322875 ABCB6Q9NP58 842 aa8.98□□□□□ -0.97
CD46-201ENST00000322875 PA2G4Q9UQ80 394 aaKnown RBP8.98□□□□□ -0.97
CD46-201ENST00000322875 CLIC4Q9Y696 253 aa8.98□□□□□ -0.97
CD46-201ENST00000322875 ZC3H4Q9UPT8 1303 aaKnown RBP8.98□□□□□ -0.97
CD46-201ENST00000322875 SHOX2O60902 331 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms