RNA–Protein interactions for RNA: ENST00000321797.12

LMO7-201, Transcript of LIM domain 7, humanhuman

TSL 5 BASIC

Gene LMO7, Length 5,647 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-201ENST00000321797 CHCHD3Q9NX63 227 aaKnown RBP11.05□□□□□ -0.64
LMO7-201ENST00000321797 SF3A3Q12874 501 aaKnown RBP eCLIP11.04□□□□□ -0.643e-7■■□□□ 13.7
LMO7-201ENST00000321797 NBPF20Q3BBV1 942 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 ARL10Q8N8L6 244 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 TMX3Q96JJ7 454 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 CAPZA3Q96KX2 299 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 LZTFL1Q9NQ48 299 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 SAMM50Q9Y512 469 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 SHROOM2Q13796 1616 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 CLCN6P51797 869 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 PPP1R7Q15435 360 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 NBPF9Q3BBW0 867 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 GNPTABQ3T906 1256 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 UTP14AQ9BVJ6 771 aaKnown RBP11.04□□□□□ -0.64
LMO7-201ENST00000321797 BICC1Q9H694 974 aaKnown RBP11.04□□□□□ -0.64
LMO7-201ENST00000321797 ABCA9Q8IUA7 1624 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 CHUKO15111 745 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 CKAP4Q07065 602 aaKnown RBP11.04□□□□□ -0.64
LMO7-201ENST00000321797 ZBTB17Q13105 803 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 STIM1Q13586 685 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 ZSCAN25Q6NSZ9 544 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 SLFN14P0C7P3 912 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 PIP4K2AP48426 406 aaPredicted RBP11.04□□□□□ -0.64
LMO7-201ENST00000321797 ACTN3Q08043 901 aaPredicted RBP11.04□□□□□ -0.64
LMO7-201ENST00000321797 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
LMO7-201ENST00000321797 TRAPPC3LQ5T215 181 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 GPR161Q8N6U8 529 aaKnown RBP11.04□□□□□ -0.64
LMO7-201ENST00000321797 ZSCAN31Q96LW9 406 aaPredicted RBP11.04□□□□□ -0.64
LMO7-201ENST00000321797 SAMD15Q9P1V8 674 aa11.04□□□□□ -0.64
LMO7-201ENST00000321797 AIMP1Q12904 312 aaKnown RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 TRAF1Q13077 416 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 SELENOSQ9BQE4 189 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 FAM204AQ9H8W3 233 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 KDM5CP41229 1560 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 AGLP35573 1532 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 ARHGEF12Q9NZN5 1544 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 PCDH11XQ9BZA7 1347 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 PCDH11YQ9BZA8 1340 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 PNMA6AP0CW24 399 aaPredicted RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 EXOSC9Q06265 439 aaKnown RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 CCDC178Q5BJE1 867 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 ZNF569Q5MCW4 686 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 KLHL10Q6JEL2 608 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 CCDC170Q8IYT3 715 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 CACNA2D3Q8IZS8 1091 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 JAKMIP1Q96N16 626 aaKnown RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 DACT1Q9NYF0 836 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 FAN1Q9Y2M0 1017 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 ARHGEF40Q8TER5 1519 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 YTHDC2Q9H6S0 1430 aaKnown RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 IFIT2P09913 472 aaKnown RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 ZNF75DP51815 510 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 RRS1Q15050 365 aaKnown RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 CCDC129Q6ZRS4 1044 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 RMI1Q9H9A7 625 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 SPON1Q9HCB6 807 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 PRM3Q9NNZ6 103 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 E7EVH7 732 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 UBASH3AP57075 661 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 THRAP3Q9Y2W1 955 aaKnown RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 BTBD11A6QL63 1104 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 NAA30Q147X3 362 aaPredicted RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 ARFGAP2Q8N6H7 521 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 RNF217Q8TC41 542 aa11.03□□□□□ -0.64
LMO7-201ENST00000321797 NUP88Q99567 741 aaPredicted RBP11.03□□□□□ -0.64
LMO7-201ENST00000321797 MAP4K4O95819 1239 aaPredicted RBP11.02□□□□□ -0.64
LMO7-201ENST00000321797 ZSCAN22P10073 491 aaPredicted RBP11.02□□□□□ -0.64
LMO7-201ENST00000321797 RWDD2BP57060 319 aa11.02□□□□□ -0.64
LMO7-201ENST00000321797 TUBB4BP68371 445 aa11.02□□□□□ -0.64
LMO7-201ENST00000321797 NME9Q86XW9 330 aa11.02□□□□□ -0.64
LMO7-201ENST00000321797 CNTROBQ8N137 903 aa11.02□□□□□ -0.64
LMO7-201ENST00000321797 ANAPC4Q9UJX5 808 aa11.02□□□□□ -0.64
LMO7-201ENST00000321797 TUBBP07437 444 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 CLTAP09496 248 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 ARHGEF5Q12774 1597 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 SPA17Q15506 151 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 PPIP5K1Q6PFW1 1433 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 GDAP1L1Q96MZ0 367 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 PIK3C2GO75747 1445 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 BRINP3Q76B58 766 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 DDX12PQ92771 950 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 IFT74Q96LB3 600 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 CAPS2Q9BXY5 557 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 STK38LQ9Y2H1 464 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 GNAT3A8MTJ3 354 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 SAFBQ15424 915 aaKnown RBP eCLIP11.02□□□□□ -0.65
LMO7-201ENST00000321797 SMARCC2Q8TAQ2 1214 aa11.02□□□□□ -0.65
LMO7-201ENST00000321797 NAA15Q9BXJ9 866 aaKnown RBP11.02□□□□□ -0.65
LMO7-201ENST00000321797 GOLGA6BA6NDN3 693 aa11.01□□□□□ -0.65
LMO7-201ENST00000321797 ZBTB10Q96DT7 871 aa11.01□□□□□ -0.65
LMO7-201ENST00000321797 hCG_2014768A0A024R1R8 64 aa11.01□□□□□ -0.65
LMO7-201ENST00000321797 SLC20A2Q08357 652 aa11.01□□□□□ -0.65
LMO7-201ENST00000321797 CCDC40Q4G0X9 1142 aa11.01□□□□□ -0.65
LMO7-201ENST00000321797 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
LMO7-201ENST00000321797 RNF10Q8N5U6 811 aaKnown RBP11.01□□□□□ -0.65
LMO7-201ENST00000321797 FSIP1Q8NA03 581 aa11.01□□□□□ -0.65
LMO7-201ENST00000321797 STAG1Q8WVM7 1258 aa11.01□□□□□ -0.65
LMO7-201ENST00000321797 LUC7LQ9NQ29 371 aaKnown RBP11.01□□□□□ -0.65
LMO7-201ENST00000321797 PRR29P0C7W0 189 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms