RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ZNHIT6Q9NWK9 470 aaKnown RBP14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 A0A087WWV3 80 aa14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 LMAN1P49257 510 aa14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 EVCP57679 992 aa14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 NLRP12P59046 1061 aa14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 RESTQ13127 1097 aa14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 SKIDA1Q1XH10 827 aa14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 AXDND1Q5T1B0 1012 aaPredicted RBP14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 TXLNBQ8N3L3 684 aa14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 CPS1P31327 1500 aa14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 E7EWF7 191 aa14.65□□□□□ -0.06
DNMT3A-202ENST00000321117 MTX1Q13505 466 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 HSP90AB3PQ58FF7 597 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 FTOQ9C0B1 505 aaKnown RBP eCLIP14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 RCOR1Q9UKL0 485 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 SALL3Q9BXA9 1300 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 YEATS4O95619 227 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 LDHAL6AQ6ZMR3 332 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 CARD6Q9BX69 1037 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 DBNLQ9UJU6 430 aaKnown RBP14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 KANK3Q6NY19 840 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 DSCC1Q9BVC3 393 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 PCDHA7Q9UN72 937 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 ADCY9O60503 1353 aa14.64□□□□□ -0.07
DNMT3A-202ENST00000321117 POTEB2H3BUK9 544 aa14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 PGBD1Q96JS3 809 aa14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 MPHOSPH8Q99549 860 aa14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 MARCH6O60337 910 aa14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 TOB2Q14106 344 aaPredicted RBP14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 FRMPD1Q5SYB0 1578 aa14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 DLC1Q96QB1 1528 aa14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 A0A1B0GUL7 405 aa14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 NAP1L1P55209 391 aaKnown RBP14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 NSUN7Q8NE18 718 aaKnown RBP14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 ZNF274Q96GC6 653 aaPredicted RBP14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 RXRAP19793 462 aa14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 MYSM1Q5VVJ2 828 aa14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 BAG1Q99933 345 aaPredicted RBP14.63□□□□□ -0.07
DNMT3A-202ENST00000321117 SETQ01105 290 aaPredicted RBP14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 STIM1Q13586 685 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 ARID5BQ14865 1188 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 KARSQ15046 597 aaKnown RBP14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 TTF1Q15361 905 aaPredicted RBP14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 PLA2G4DQ86XP0 818 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 GOLGA1Q92805 767 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 HAUS7Q99871 368 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 COPRSQ9NQ92 184 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 PRDM11Q9NQV5 511 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 CCDC175P0C221 793 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 MAP3K12Q12852 859 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 MCM6Q14566 821 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 CCDC148Q8NFR7 591 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 EYA2O00167 538 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 LRP2BPQ9P2M1 347 aa14.62□□□□□ -0.07
DNMT3A-202ENST00000321117 ETF1P62495 437 aaKnown RBP14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 SLC9C2Q5TAH2 1124 aa14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 NUP88Q99567 741 aaPredicted RBP14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 NDUFA8P51970 172 aa14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 NAA30Q147X3 362 aaPredicted RBP14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 ZNF496Q96IT1 587 aaPredicted RBP14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 MINDY4BA8MYZ0 360 aa14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 CCDC144BQ3MJ40 725 aa14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 SARM1Q6SZW1 724 aa14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 KIAA1328Q86T90 577 aa14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 BBXQ8WY36 941 aaPredicted RBP14.61□□□□□ -0.07
DNMT3A-202ENST00000321117 CDC42BPGQ6DT37 1551 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 PRAMEF22A3QJZ6 481 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 ZNF710Q8N1W2 664 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 ANKRD18BA2A2Z9 1011 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 ARHGAP6O43182 974 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 PDIA3P30101 505 aaKnown RBP14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 FAM193AP78312 1265 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 PLBD2Q8NHP8 589 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 CRACR2AQ9BSW2 395 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 MTMR7Q9Y216 660 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 PSDA5PKW4 1024 aaPredicted RBP14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 HSPD1P10809 573 aaKnown RBP14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 PFKFB1P16118 471 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 DPCR1Q3MIW9 517 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 LZTFL1Q9NQ48 299 aa14.6□□□□□ -0.07
DNMT3A-202ENST00000321117 KIF20BQ96Q89 1820 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 A0A1W2PQ27 194 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 A0A1W2PQ64 194 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 A0A1W2PQD8 194 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 AFMP43652 599 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 EIF5P55010 431 aaKnown RBP14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 PPP2R3AQ06190 1150 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 MFSD6Q6ZSS7 791 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 AMOTL1Q8IY63 956 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 KRI1Q8N9T8 703 aaKnown RBP14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 RTEL1Q9NZ71 1219 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 GPTP24298 496 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 CHRNA2Q15822 529 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 SLC52A2Q9HAB3 445 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 KCNH3Q9ULD8 1083 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 USP42Q9H9J4 1324 aaKnown RBP14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 N4BP3O15049 544 aa14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 MAP9Q49MG5 647 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms