RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 TRIM37O94972 964 aa10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 TPM1P09493 284 aa10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 PCP11498 1178 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 FOXO4P98177 505 aa10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 SLC10A5Q5PT55 438 aa10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 DBNLQ9UJU6 430 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 TXLNAP40222 546 aa10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 PDE4BQ07343 736 aa10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 WDR78Q5VTH9 848 aa10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 MKNK2Q9HBH9 465 aa10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 LRP6O75581 1613 aa10.03□□□□□ -0.8
PDLIM5-201ENST00000317968 GRM1Q13255 1194 aa10.02□□□□□ -0.8
PDLIM5-201ENST00000317968 PPP4R3AQ6IN85 833 aa10.02□□□□□ -0.8
PDLIM5-201ENST00000317968 ZNF396Q96N95 335 aaPredicted RBP10.02□□□□□ -0.8
PDLIM5-201ENST00000317968 XDHP47989 1333 aa10.02□□□□□ -0.8
PDLIM5-201ENST00000317968 HLFQ16534 295 aa10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 TXNRD1Q16881 649 aa10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 SNRKQ9NRH2 765 aa10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 SERPINB2P05120 415 aa10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 KLHDC4Q8TBB5 520 aa10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 ZNF76P36508 570 aa10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 TSHZ3Q63HK5 1081 aa10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 ZNF444Q8N0Y2 327 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 ZNF594Q96JF6 807 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 CYP7A1P22680 504 aa10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 PPP2R5BQ15173 497 aa10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 SPATA5Q8NB90 893 aa10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-201ENST00000317968 CREB3L3Q68CJ9 461 aa10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 CCDC125Q86Z20 511 aa10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 PI4K2BQ8TCG2 481 aa10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 KCNQ2O43526 872 aa10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 GRAPQ13588 217 aa10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 GRAPLQ8TC17 118 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 EPHA10Q5JZY3 1008 aa10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 INTS5Q6P9B9 1019 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 NSFL1CQ9UNZ2 370 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 PLSCR1O15162 318 aa10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 JMYQ8N9B5 988 aa10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 ESR2Q92731 530 aa10.01□□□□□ -0.81
PDLIM5-201ENST00000317968 LETM1O95202 739 aaPredicted RBP10□□□□□ -0.81
PDLIM5-201ENST00000317968 ITPK1Q13572 414 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 CCDC102BQ68D86 513 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 DHX32Q7L7V1 743 aaKnown RBP10□□□□□ -0.81
PDLIM5-201ENST00000317968 SEC63Q9UGP8 760 aaKnown RBP10□□□□□ -0.81
PDLIM5-201ENST00000317968 COL22A1Q8NFW1 1626 aaPredicted RBP10□□□□□ -0.81
PDLIM5-201ENST00000317968 LDHBP07195 334 aaKnown RBP10□□□□□ -0.81
PDLIM5-201ENST00000317968 MFSD6Q6ZSS7 791 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 SLC16A10Q8TF71 515 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 DDX49Q9Y6V7 483 aaKnown RBP10□□□□□ -0.81
PDLIM5-201ENST00000317968 MAGEB6P1A0A0J9YX57 407 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 CHRNDQ07001 517 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 LRRC24Q50LG9 513 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 NIM1KQ8IY84 436 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
PDLIM5-201ENST00000317968 STRCP1A6NGW2 1772 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 RFX5P48382 616 aaPredicted RBP10□□□□□ -0.81
PDLIM5-201ENST00000317968 CREBRFQ8IUR6 639 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 VPS37CA5D8V6 355 aaPredicted RBP10□□□□□ -0.81
PDLIM5-201ENST00000317968 ZMYM1Q5SVZ6 1142 aa10□□□□□ -0.81
PDLIM5-201ENST00000317968 UPF3BQ9BZI7 483 aaKnown RBP10□□□□□ -0.81
PDLIM5-201ENST00000317968 NPR1P16066 1061 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 FBXO41Q8TF61 875 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 TMEM87BQ96K49 555 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 CFAP45Q9UL16 551 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 CALM1P0DP23 149 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 CALM2P0DP24 149 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 CALM3P0DP25 149 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 FOXD4L1Q9NU39 408 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 GJA3Q9Y6H8 435 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 LARP1BQ659C4 914 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 NTSR2O95665 410 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 GNAQP50148 359 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 KRT85P78386 507 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 MAP4K1Q92918 833 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 CASP7P55210 303 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 KIF22Q14807 665 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 NFKBIBQ15653 356 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 ERFEQ4G0M1 354 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 CRAMP1Q96RY5 1269 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 BRIP1Q9BX63 1249 aa9.99□□□□□ -0.81
PDLIM5-201ENST00000317968 ZNF804BA4D1E1 1349 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 PKD1L3Q7Z443 1732 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 TPM3P06753 285 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 DNTTIP2Q5QJE6 756 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 RUFY3Q7L099 469 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 LINC00116Q8NCU8 138 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 LLPHQ9BRT6 129 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 MTA3Q9BTC8 594 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 NOL7Q9UMY1 257 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 UFL1O94874 794 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 RIPOR2Q9Y4F9 1068 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 PES1O00541 588 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 KRT18P05783 430 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 KIF5BP33176 963 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 SLC4A4Q9Y6R1 1079 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 SPDYE4A6NLX3 237 aa9.98□□□□□ -0.81
PDLIM5-201ENST00000317968 MPNDQ8N594 471 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms