RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 GNPATO15228 680 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 MEX3CQ5U5Q3 659 aaKnown RBP13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 Q6ZUG5 572 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 NYXQ9GZU5 481 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 GZF1Q9H116 711 aaPredicted RBP13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 SRP68Q9UHB9 627 aaKnown RBP13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 MTMR6Q9Y217 621 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 SNAP23O00161 211 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 GPAA1O43292 621 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 FGAP02671 866 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 EVCP57679 992 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 GTF3C6Q969F1 213 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 CTNNA3Q9UI47 895 aa13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
EFCAB11-201ENST00000316738 PRPF40AO75400 957 aaKnown RBP13.06□□□□□ -0.32
EFCAB11-201ENST00000316738 SLC9C2Q5TAH2 1124 aa13.06□□□□□ -0.32
EFCAB11-201ENST00000316738 TTLL5Q6EMB2 1281 aa13.06□□□□□ -0.32
EFCAB11-201ENST00000316738 WASHC4Q2M389 1173 aa13.06□□□□□ -0.32
EFCAB11-201ENST00000316738 DDX49Q9Y6V7 483 aaKnown RBP13.06□□□□□ -0.32
EFCAB11-201ENST00000316738 ZMYM6O95789 1325 aa13.05□□□□□ -0.32
EFCAB11-201ENST00000316738 F13A1P00488 732 aa13.05□□□□□ -0.32
EFCAB11-201ENST00000316738 PDE6AP16499 860 aa13.05□□□□□ -0.32
EFCAB11-201ENST00000316738 LRRC4BQ9NT99 713 aa13.05□□□□□ -0.32
EFCAB11-201ENST00000316738 TIAM2Q8IVF5 1701 aa13.05□□□□□ -0.32
EFCAB11-201ENST00000316738 L1TD1Q5T7N2 865 aaKnown RBP13.05□□□□□ -0.32
EFCAB11-201ENST00000316738 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
EFCAB11-201ENST00000316738 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
EFCAB11-201ENST00000316738 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
EFCAB11-201ENST00000316738 ZNF532Q9HCE3 1301 aa13.05□□□□□ -0.32
EFCAB11-201ENST00000316738 PFKFB2O60825 505 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 TM4SF1P30408 202 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 UBE4AQ14139 1066 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 SETDB2Q96T68 719 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 ZPR1O75312 459 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 BCAMP50895 628 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 CACNA1SQ13698 1873 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 ALX1Q15699 326 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 SMARCC2Q8TAQ2 1214 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 MINPP1Q9UNW1 487 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 COL1A1P02452 1464 aaPredicted RBP13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 WDR19Q8NEZ3 1342 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 GAS2L3Q86XJ1 694 aa13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 MB21D2Q8IYB1 491 aaPredicted RBP13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 STRBPQ96SI9 672 aaKnown RBP13.04□□□□□ -0.32
EFCAB11-201ENST00000316738 ZNF445P59923 1031 aa13.03□□□□□ -0.32
EFCAB11-201ENST00000316738 IMMTQ16891 758 aaKnown RBP13.03□□□□□ -0.32
EFCAB11-201ENST00000316738 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
EFCAB11-201ENST00000316738 SCRN1Q12765 414 aa13.03□□□□□ -0.32
EFCAB11-201ENST00000316738 BRF1Q92994 677 aa13.03□□□□□ -0.32
EFCAB11-201ENST00000316738 LLPHQ9BRT6 129 aaKnown RBP13.03□□□□□ -0.32
EFCAB11-201ENST00000316738 CHD4Q14839 1912 aa13.03□□□□□ -0.32
EFCAB11-201ENST00000316738 XRCC6P12956 609 aaKnown RBP eCLIP13.02□□□□□ -0.32
EFCAB11-201ENST00000316738 TPTE2Q6XPS3 522 aa13.02□□□□□ -0.32
EFCAB11-201ENST00000316738 BICDL1Q6ZP65 573 aa13.02□□□□□ -0.32
EFCAB11-201ENST00000316738 ZNF274Q96GC6 653 aaPredicted RBP13.02□□□□□ -0.32
EFCAB11-201ENST00000316738 NSFL1CQ9UNZ2 370 aaKnown RBP13.02□□□□□ -0.32
EFCAB11-201ENST00000316738 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.32
EFCAB11-201ENST00000316738 IDH1O75874 414 aaKnown RBP13.02□□□□□ -0.33
EFCAB11-201ENST00000316738 QTRT2Q9H974 415 aaKnown RBP13.02□□□□□ -0.33
EFCAB11-201ENST00000316738 SALL1Q9NSC2 1324 aa13.02□□□□□ -0.33
EFCAB11-201ENST00000316738 TRAPPC3LQ5T215 181 aa13.02□□□□□ -0.33
EFCAB11-201ENST00000316738 NBPF5PQ86XG9 351 aaPredicted RBP13.02□□□□□ -0.33
EFCAB11-201ENST00000316738 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
EFCAB11-201ENST00000316738 KIAA1551Q9HCM1 1747 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 EP400Q96L91 3159 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 MYH13Q9UKX3 1938 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 WTIPA6NIX2 430 aaPredicted RBP13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 CTDNEP1O95476 244 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 PDCP20941 246 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 MAP3K12Q12852 859 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 USP48Q86UV5 1035 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 LRRC2Q9BYS8 371 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 CARMIL3Q8ND23 1372 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 MBD3O95983 291 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 MRE11P49959 708 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 ANTXR2P58335 489 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 ZSCAN23Q3MJ62 389 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 LARP1BQ659C4 914 aaKnown RBP13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 ATP6V1DQ9Y5K8 247 aa13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 PDS5AQ29RF7 1337 aaKnown RBP13.01□□□□□ -0.33
EFCAB11-201ENST00000316738 PATL2C9JE40 543 aaKnown RBP13□□□□□ -0.33
EFCAB11-201ENST00000316738 DTNBO60941 627 aa13□□□□□ -0.33
EFCAB11-201ENST00000316738 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
EFCAB11-201ENST00000316738 RPS8P62241 208 aaKnown RBP13□□□□□ -0.33
EFCAB11-201ENST00000316738 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
EFCAB11-201ENST00000316738 FBXO33Q7Z6M2 555 aa13□□□□□ -0.33
EFCAB11-201ENST00000316738 ZNF213O14771 459 aa13□□□□□ -0.33
EFCAB11-201ENST00000316738 APOBRQ0VD83 1088 aa13□□□□□ -0.33
EFCAB11-201ENST00000316738 STK3Q13188 491 aa13□□□□□ -0.33
EFCAB11-201ENST00000316738 MAGEB6Q8N7X4 407 aa13□□□□□ -0.33
EFCAB11-201ENST00000316738 NSUN7Q8NE18 718 aaKnown RBP13□□□□□ -0.33
EFCAB11-201ENST00000316738 FAM84BQ96KN1 310 aaPredicted RBP13□□□□□ -0.33
EFCAB11-201ENST00000316738 RFC4P35249 363 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms