RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 NEK11Q8NG66 645 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SMARCE1Q969G3 411 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 RRP15Q9Y3B9 282 aaKnown RBP5.49□□□□□ -1.53
PTPN13-201ENST00000316707 MAP2K7O14733 419 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 ERCC5P28715 1186 aaPredicted RBP5.49□□□□□ -1.53
PTPN13-201ENST00000316707 CHMP4BP1P59074 171 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 APOBRQ0VD83 1088 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 ANO1Q5XXA6 986 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SPECC1LQ69YQ0 1117 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SRGAP1Q7Z6B7 1085 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 FAM71BQ8TC56 605 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 PARD6BQ9BYG5 372 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 TTF2Q9UNY4 1162 aaKnown RBP5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SASH1O94885 1247 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SCRN1Q12765 414 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 NCAPHQ15003 741 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 WHAMMP3Q1A5X7 153 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 AKAP4Q5JQC9 854 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 RPAINQ86UA6 219 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SENP3Q9H4L4 574 aaPredicted RBP5.49□□□□□ -1.53
PTPN13-201ENST00000316707 VIPAS39Q9H9C1 493 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 GEMIN8Q9NWZ8 242 aaKnown RBP5.49□□□□□ -1.53
PTPN13-201ENST00000316707 MRFAP1Q9Y605 127 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SH3TC1Q8TE82 1336 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 MAP3K15Q6ZN16 1313 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 WDR19Q8NEZ3 1342 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 FAM237AA0A1B0GTK4 181 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 CTAGE15A4D2H0 777 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SOX12O15370 315 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 ZFYP08048 801 aaPredicted RBP5.49□□□□□ -1.53
PTPN13-201ENST00000316707 CTAGE8P0CG41 777 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 SPAG1Q07617 926 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 CTAGE6Q86UF2 777 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 REXO1L1PQ8IX06 675 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 CTAGE4Q8IX94 777 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 RAB21Q9UL25 225 aa5.49□□□□□ -1.53
PTPN13-201ENST00000316707 PPFIA4O75335 1185 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 EXOSC10Q01780 885 aaKnown RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 DNAJC21Q5F1R6 531 aaKnown RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 MSANTD4Q8NCY6 345 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 CCDC12Q8WUD4 166 aaPredicted RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 KNDC1Q76NI1 1749 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 USP5P45974 858 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 RALYLQ86SE5 291 aaKnown RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 CTAGE1Q96RT6 745 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 GOLPH3LQ9H4A5 285 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 A0A1B0GVL5 298 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 HOXC9P31274 260 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 PPFIBP1Q86W92 1011 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 ENOX1Q8TC92 643 aaKnown RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 MAP3K2Q9Y2U5 619 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 A0A087WUV0 522 aaPredicted RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 PPP6R2O75170 966 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 PDIA3P30101 505 aaKnown RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 EIF5P55010 431 aaKnown RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 ZNF530Q6P9A1 599 aaPredicted RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 SALL1Q9NSC2 1324 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 GUCY2CP25092 1073 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 FILIP1LQ4L180 1135 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 AXDND1Q5T1B0 1012 aaPredicted RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 ANKRD20A12PQ8NF67 263 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 NCAPGQ9BPX3 1015 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 PA2G4Q9UQ80 394 aaKnown RBP5.48□□□□□ -1.53
PTPN13-201ENST00000316707 CUTAO60888 179 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 C1orf141Q5JVX7 400 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 CNGA4Q8IV77 575 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 WASF1Q92558 559 aa5.48□□□□□ -1.53
PTPN13-201ENST00000316707 WDHD1O75717 1129 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-201ENST00000316707 PFKFB1P16118 471 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 TRIM29Q14134 588 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 CCDC70Q6NSX1 233 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 EFCAB13Q8IY85 973 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 C19orf44Q9H6X5 657 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 JRKLQ9Y4A0 524 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 NCKAP5LQ9HCH0 1330 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 BTBD11A6QL63 1104 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 VGLL3A8MV65 326 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 GTF2A1P52655 376 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-201ENST00000316707 TTC31Q49AM3 519 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-201ENST00000316707 ANKARQ7Z5J8 1434 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 C10orf67Q8IYJ2 551 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 PANX2Q96RD6 677 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 HAUS7Q99871 368 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 NRKQ7Z2Y5 1582 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 VWA3AA6NCI4 1184 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 NDUFA8P51970 172 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 TRDNQ13061 729 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 SAFBQ15424 915 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPN13-201ENST00000316707 KIF4BQ2VIQ3 1234 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 TNNI3KQ59H18 835 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 ARHGEF25Q86VW2 580 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 KCNH5Q8NCM2 988 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 EHBP1Q8NDI1 1231 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 L1RE1Q9UN81 338 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 TBX22Q9Y458 520 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 EID1Q9Y6B2 187 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 FPGT-TNNI3KV9GXZ4 949 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 AGLP35573 1532 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 IMMTQ16891 758 aaKnown RBP5.47□□□□□ -1.53
PTPN13-201ENST00000316707 ZNF589Q86UQ0 364 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms