RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SMIM22K7EJ46 135 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 FIBPO43427 364 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 JAK2O60674 1132 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 SYT1P21579 422 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 TOB2Q14106 344 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-202ENST00000315962 CHMP4CQ96CF2 233 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 HMG20BQ9P0W2 317 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 CDHR2Q9BYE9 1310 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 FGAP02671 866 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 APOBRQ0VD83 1088 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 PUM3Q15397 648 aaKnown RBP9.01□□□□□ -0.97
TRIM55-202ENST00000315962 ZMYM1Q5SVZ6 1142 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 CWC22Q9HCG8 908 aaKnown RBP9.01□□□□□ -0.97
TRIM55-202ENST00000315962 CNPY2Q9Y2B0 182 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 ZNF652Q9Y2D9 606 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 N4BP2Q86UW6 1770 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-202ENST00000315962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.01□□□□□ -0.97
TRIM55-202ENST00000315962 FOXP2O15409 715 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 GPAA1O43292 621 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 RPS6KB1P23443 525 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 MCM2P49736 904 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 CUL4AQ13619 759 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 CLEC17AQ6ZS10 378 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 USP48Q86UV5 1035 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 MAGEB6Q8N7X4 407 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 PDLIM2Q96JY6 352 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 ZNF532Q9HCE3 1301 aa9.01□□□□□ -0.97
TRIM55-202ENST00000315962 MYH14Q7Z406 1995 aaKnown RBP9□□□□□ -0.97
TRIM55-202ENST00000315962 RIC1Q4ADV7 1423 aa9□□□□□ -0.97
TRIM55-202ENST00000315962 PRKAB2O43741 272 aa9□□□□□ -0.97
TRIM55-202ENST00000315962 RXRAP19793 462 aa9□□□□□ -0.97
TRIM55-202ENST00000315962 VPS37DQ86XT2 251 aa9□□□□□ -0.97
TRIM55-202ENST00000315962 SPATA5Q8NB90 893 aa9□□□□□ -0.97
TRIM55-202ENST00000315962 AK7Q96M32 723 aa9□□□□□ -0.97
TRIM55-202ENST00000315962 GPR108Q9NPR9 543 aa9□□□□□ -0.97
TRIM55-202ENST00000315962 ZHX1Q9UKY1 873 aaPredicted RBP9□□□□□ -0.97
TRIM55-202ENST00000315962 LPIN2Q92539 896 aa9□□□□□ -0.97
TRIM55-202ENST00000315962 TSPY26PQ9H489 355 aa9□□□□□ -0.97
TRIM55-202ENST00000315962 LRP2BPQ9P2M1 347 aa9□□□□□ -0.97
TRIM55-202ENST00000315962 ABCC12Q96J65 1359 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 E7EWF7 191 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 PSMA5P28066 241 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 GUCY1B3Q02153 619 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 PDE4CQ08493 712 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 TRAPPC3LQ5T215 181 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 TXNRD3Q86VQ6 643 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 ANKRD18AQ8IVF6 992 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 CCDC144CPQ8IYA2 1237 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 SPC24Q8NBT2 197 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 ARMT1Q9H993 441 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 TOMM22Q9NS69 142 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 LAMB4A4D0S4 1761 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 CEBPZQ03701 1054 aaKnown RBP8.99□□□□□ -0.97
TRIM55-202ENST00000315962 PARP10Q53GL7 1025 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 TRPC5Q9UL62 973 aaPredicted RBP8.99□□□□□ -0.97
TRIM55-202ENST00000315962 PAPPAQ13219 1627 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 TJP1Q07157 1748 aa8.99□□□□□ -0.97
TRIM55-202ENST00000315962 COL22A1Q8NFW1 1626 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-202ENST00000315962 SPATA31A6Q5VVP1 1343 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 STX6O43752 255 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 RPS6KA4O75676 772 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 BRD1O95696 1058 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 SLC5A1P13866 664 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 CHAF1AQ13111 956 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-202ENST00000315962 LARP1BQ659C4 914 aaKnown RBP8.98□□□□□ -0.97
TRIM55-202ENST00000315962 TFIP11Q9UBB9 837 aaKnown RBP8.98□□□□□ -0.97
TRIM55-202ENST00000315962 MINPP1Q9UNW1 487 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 U3KPZ7 1027 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-202ENST00000315962 NUP188Q5SRE5 1749 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 COL4A1P02462 1669 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 PDIA4P13667 645 aaKnown RBP8.98□□□□□ -0.97
TRIM55-202ENST00000315962 PDE6AP16499 860 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 DNM1Q05193 864 aaKnown RBP8.98□□□□□ -0.97
TRIM55-202ENST00000315962 RRP12Q5JTH9 1297 aaKnown RBP8.98□□□□□ -0.97
TRIM55-202ENST00000315962 GIMAP6Q6P9H5 292 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 ADGRA1Q86SQ6 560 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 AIDAQ96BJ3 306 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 NLRP3Q96P20 1036 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 ZKSCAN3Q9BRR0 538 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 HELLSQ9NRZ9 838 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 GJB4Q9NTQ9 266 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 NARFQ9UHQ1 456 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 MROH5Q6ZUA9 1318 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 ZNF500O60304 480 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-202ENST00000315962 IGSF3O75054 1194 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 MBD4O95243 580 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 CTDSPL2Q05D32 466 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 NFIXQ14938 502 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 TPTE2Q6XPS3 522 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 CDC37L1Q7L3B6 337 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 SDR42E1Q8WUS8 393 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 RAI14Q9P0K7 980 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 CCDC39Q9UFE4 941 aa8.98□□□□□ -0.97
TRIM55-202ENST00000315962 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-202ENST00000315962 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.97□□□□□ -0.97
TRIM55-202ENST00000315962 FGFR2P21802 821 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 EVX2Q03828 476 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 APPBP2Q92624 585 aa8.97□□□□□ -0.97
TRIM55-202ENST00000315962 INTS4Q96HW7 963 aaKnown RBP8.97□□□□□ -0.97
TRIM55-202ENST00000315962 MYL10Q9BUA6 226 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms