RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 CASC1Q6TDU7 716 aa19.54■□□□□ 0.72
TUBB3-201ENST00000315491 IPO9Q96P70 1041 aaKnown RBP19.54■□□□□ 0.72
TUBB3-201ENST00000315491 PSMD1Q99460 953 aa19.54■□□□□ 0.72
TUBB3-201ENST00000315491 COA1Q9GZY4 146 aa19.54■□□□□ 0.72
TUBB3-201ENST00000315491 PDS5AQ29RF7 1337 aaKnown RBP19.53■□□□□ 0.72
TUBB3-201ENST00000315491 CHMLP26374 656 aa19.53■□□□□ 0.72
TUBB3-201ENST00000315491 SYT17Q9BSW7 474 aa19.53■□□□□ 0.72
TUBB3-201ENST00000315491 RFX7Q2KHR2 1363 aa19.53■□□□□ 0.72
TUBB3-201ENST00000315491 IL1R1P14778 569 aa19.52■□□□□ 0.72
TUBB3-201ENST00000315491 PIH1D3Q9NQM4 214 aaKnown RBP19.52■□□□□ 0.72
TUBB3-201ENST00000315491 HIP1O00291 1037 aa19.52■□□□□ 0.71
TUBB3-201ENST00000315491 AK9Q5TCS8 1911 aa19.51■□□□□ 0.71
TUBB3-201ENST00000315491 ANP32AP39687 249 aaKnown RBP19.51■□□□□ 0.71
TUBB3-201ENST00000315491 KIAA2012Q0VF49 1180 aa19.51■□□□□ 0.71
TUBB3-201ENST00000315491 CHAF1AQ13111 956 aaPredicted RBP19.51■□□□□ 0.71
TUBB3-201ENST00000315491 TICAM2Q86XR7 235 aa19.51■□□□□ 0.71
TUBB3-201ENST00000315491 DIAPH3Q9NSV4 1193 aa19.51■□□□□ 0.71
TUBB3-201ENST00000315491 G3V3G9 751 aa19.5■□□□□ 0.71
TUBB3-201ENST00000315491 NBR1Q14596 966 aa19.5■□□□□ 0.71
TUBB3-201ENST00000315491 DOK7Q18PE1 504 aa19.5■□□□□ 0.71
TUBB3-201ENST00000315491 DCAF8Q5TAQ9 597 aa19.5■□□□□ 0.71
TUBB3-201ENST00000315491 PPIP5K2O43314 1243 aa19.49■□□□□ 0.71
TUBB3-201ENST00000315491 AOC3Q16853 763 aa19.49■□□□□ 0.71
TUBB3-201ENST00000315491 LRRFIP1Q32MZ4 808 aaKnown RBP19.49■□□□□ 0.71
TUBB3-201ENST00000315491 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.49■□□□□ 0.71
TUBB3-201ENST00000315491 VPS33BQ9H267 617 aa19.49■□□□□ 0.71
TUBB3-201ENST00000315491 IDH1O75874 414 aaKnown RBP19.48■□□□□ 0.71
TUBB3-201ENST00000315491 WDR66Q8TBY9 1149 aa19.48■□□□□ 0.71
TUBB3-201ENST00000315491 ESYT1Q9BSJ8 1104 aa19.48■□□□□ 0.71
TUBB3-201ENST00000315491 TAOK3Q9H2K8 898 aa19.48■□□□□ 0.71
TUBB3-201ENST00000315491 DBNDD1Q9H9R9 158 aa19.48■□□□□ 0.71
TUBB3-201ENST00000315491 ABCF2Q9UG63 623 aa19.48■□□□□ 0.71
TUBB3-201ENST00000315491 JAG2Q9Y219 1238 aa19.48■□□□□ 0.71
TUBB3-201ENST00000315491 RNF113AO15541 343 aaKnown RBP19.47■□□□□ 0.71
TUBB3-201ENST00000315491 SEC24BO95487 1268 aa19.47■□□□□ 0.71
TUBB3-201ENST00000315491 NMIQ13287 307 aaPredicted RBP19.47■□□□□ 0.71
TUBB3-201ENST00000315491 ZSCAN25Q6NSZ9 544 aa19.47■□□□□ 0.71
TUBB3-201ENST00000315491 CWC27Q6UX04 472 aaKnown RBP19.47■□□□□ 0.71
TUBB3-201ENST00000315491 PODNQ7Z5L7 613 aa19.47■□□□□ 0.71
TUBB3-201ENST00000315491 ZNF277Q9NRM2 450 aaPredicted RBP19.47■□□□□ 0.71
TUBB3-201ENST00000315491 SALL1Q9NSC2 1324 aa19.47■□□□□ 0.71
TUBB3-201ENST00000315491 NFKBIEO00221 500 aa19.47■□□□□ 0.71
TUBB3-201ENST00000315491 ZFYP08048 801 aaPredicted RBP19.47■□□□□ 0.71
TUBB3-201ENST00000315491 MAP3K12Q12852 859 aa19.47■□□□□ 0.71
TUBB3-201ENST00000315491 RUFY2Q8WXA3 655 aa19.47■□□□□ 0.71
TUBB3-201ENST00000315491 LRP2BPQ9P2M1 347 aa19.47■□□□□ 0.71
TUBB3-201ENST00000315491 FAM205AQ6ZU69 1335 aa19.46■□□□□ 0.71
TUBB3-201ENST00000315491 MYH13Q9UKX3 1938 aa19.46■□□□□ 0.71
TUBB3-201ENST00000315491 ARFGEF1Q9Y6D6 1849 aa19.46■□□□□ 0.71
TUBB3-201ENST00000315491 ECE2O60344 883 aa19.46■□□□□ 0.71
TUBB3-201ENST00000315491 EIF5BO60841 1220 aaKnown RBP19.46■□□□□ 0.71
TUBB3-201ENST00000315491 CHGBP05060 677 aa19.46■□□□□ 0.71
TUBB3-201ENST00000315491 ZGPATQ8N5A5 531 aaKnown RBP19.46■□□□□ 0.71
TUBB3-201ENST00000315491 FAM227BQ96M60 508 aa19.46■□□□□ 0.71
TUBB3-201ENST00000315491 A0A0D9SFI3 127 aa19.45■□□□□ 0.7
TUBB3-201ENST00000315491 ADD2P35612 726 aa19.45■□□□□ 0.7
TUBB3-201ENST00000315491 IARSP41252 1262 aaKnown RBP19.45■□□□□ 0.7
TUBB3-201ENST00000315491 GTF2IP78347 998 aa19.45■□□□□ 0.7
TUBB3-201ENST00000315491 LARGE2Q8N3Y3 721 aa19.45■□□□□ 0.7
TUBB3-201ENST00000315491 LTBP3Q9NS15 1303 aa19.45■□□□□ 0.7
TUBB3-201ENST00000315491 FER1L6Q2WGJ9 1857 aa19.45■□□□□ 0.7
TUBB3-201ENST00000315491 SGSM2O43147 1006 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 MFAP1P55081 439 aaKnown RBP19.44■□□□□ 0.7
TUBB3-201ENST00000315491 ZMYM1Q5SVZ6 1142 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 SLC9C2Q5TAH2 1124 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 TBC1D22AQ8WUA7 517 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 RAI14Q9P0K7 980 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 DOCK2Q92608 1830 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 PDE6AP16499 860 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 UBE3CQ15386 1083 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 SLFNL1Q499Z3 407 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 SPTY2D1Q68D10 685 aaPredicted RBP19.44■□□□□ 0.7
TUBB3-201ENST00000315491 IL25Q9H293 177 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 RAD50Q92878 1312 aa19.44■□□□□ 0.7
TUBB3-201ENST00000315491 MAGEB6Q8N7X4 407 aa19.43■□□□□ 0.7
TUBB3-201ENST00000315491 APPBP2Q92624 585 aa19.43■□□□□ 0.7
TUBB3-201ENST00000315491 FBXW7Q969H0 707 aa19.43■□□□□ 0.7
TUBB3-201ENST00000315491 HELLSQ9NRZ9 838 aa19.43■□□□□ 0.7
TUBB3-201ENST00000315491 IGSF3O75054 1194 aa19.42■□□□□ 0.7
TUBB3-201ENST00000315491 PRDX5P30044 214 aa19.42■□□□□ 0.7
TUBB3-201ENST00000315491 RASSF7Q02833 373 aa19.42■□□□□ 0.7
TUBB3-201ENST00000315491 MFSD14BQ5SR56 506 aa19.42■□□□□ 0.7
TUBB3-201ENST00000315491 TTLL5Q6EMB2 1281 aa19.42■□□□□ 0.7
TUBB3-201ENST00000315491 ZNF532Q9HCE3 1301 aa19.42■□□□□ 0.7
TUBB3-201ENST00000315491 TCRBV5S4A2TA0A5A2 114 aa19.42■□□□□ 0.7
TUBB3-201ENST00000315491 MCMDC2Q4G0Z9 681 aa19.42■□□□□ 0.7
TUBB3-201ENST00000315491 NIM1KQ8IY84 436 aa19.42■□□□□ 0.7
TUBB3-201ENST00000315491 YDJCA8MPS7 323 aa19.41■□□□□ 0.7
TUBB3-201ENST00000315491 REC8O95072 547 aa19.41■□□□□ 0.7
TUBB3-201ENST00000315491 LDHBP07195 334 aaKnown RBP19.41■□□□□ 0.7
TUBB3-201ENST00000315491 STRIP1Q5VSL9 837 aa19.41■□□□□ 0.7
TUBB3-201ENST00000315491 SEC62Q99442 399 aaKnown RBP19.41■□□□□ 0.7
TUBB3-201ENST00000315491 KCNQ5Q9NR82 932 aa19.41■□□□□ 0.7
TUBB3-201ENST00000315491 CHD4Q14839 1912 aa19.41■□□□□ 0.7
TUBB3-201ENST00000315491 MYO5AQ9Y4I1 1855 aaKnown RBP19.41■□□□□ 0.7
TUBB3-201ENST00000315491 COL4A5P29400 1685 aa19.41■□□□□ 0.7
TUBB3-201ENST00000315491 GRIK5Q16478 980 aa19.4■□□□□ 0.7
TUBB3-201ENST00000315491 ARHGAP27Q6ZUM4 889 aa19.4■□□□□ 0.7
TUBB3-201ENST00000315491 OSBP2Q969R2 916 aa19.4■□□□□ 0.7
TUBB3-201ENST00000315491 NSUN4Q96CB9 384 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms