RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 CTAGE6Q86UF2 777 aa15.71■□□□□ 0.1
SPAST-201ENST00000315285 CTAGE4Q8IX94 777 aa15.71■□□□□ 0.1
SPAST-201ENST00000315285 LLPHQ9BRT6 129 aaKnown RBP15.71■□□□□ 0.1
SPAST-201ENST00000315285 MYO1BO43795 1136 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 LMAN1P49257 510 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 CCDC113Q9H0I3 377 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 ARHGEF10O15013 1369 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 ATP10AO60312 1499 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 NOP2P46087 812 aaKnown RBP15.7■□□□□ 0.1
SPAST-201ENST00000315285 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
SPAST-201ENST00000315285 CFAP65Q6ZU64 1925 aaKnown RBP15.7■□□□□ 0.1
SPAST-201ENST00000315285 GADD45BO75293 160 aaPredicted RBP15.7■□□□□ 0.1
SPAST-201ENST00000315285 RFC4P35249 363 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 CETN1Q12798 172 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 BRD1O95696 1058 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 CALML3P27482 149 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 KRI1Q8N9T8 703 aaKnown RBP15.7■□□□□ 0.1
SPAST-201ENST00000315285 DYDC1Q8WWB3 177 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 ACSBG1Q96GR2 724 aa15.7■□□□□ 0.1
SPAST-201ENST00000315285 PCDH11XQ9BZA7 1347 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 PCDH11YQ9BZA8 1340 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 EHMT1Q9H9B1 1298 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 KRT2P35908 639 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 CKAP4Q07065 602 aaKnown RBP15.69■□□□□ 0.1
SPAST-201ENST00000315285 SETDB2Q96T68 719 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 ERVK-7P63135 1459 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 KAT6BQ8WYB5 2073 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 PLEKHG3A1L390 1219 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 ASIC1P78348 528 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
SPAST-201ENST00000315285 CLSTN2Q9H4D0 955 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 ELP1O95163 1332 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 STX17P56962 302 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 MYL5Q02045 173 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 FAM89AQ96GI7 184 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 TRERF1Q96PN7 1200 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 PLEKHF1Q96S99 279 aa15.69■□□□□ 0.1
SPAST-201ENST00000315285 GBP2P32456 591 aaPredicted RBP15.68■□□□□ 0.1
SPAST-201ENST00000315285 EIF4A1P60842 406 aaKnown RBP15.68■□□□□ 0.1
SPAST-201ENST00000315285 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.68■□□□□ 0.1
SPAST-201ENST00000315285 NCOA5Q9HCD5 579 aaKnown RBP15.68■□□□□ 0.1
SPAST-201ENST00000315285 GOPCQ9HD26 462 aa15.68■□□□□ 0.1
SPAST-201ENST00000315285 ZRSR2Q15696 482 aaKnown RBP15.68■□□□□ 0.1
SPAST-201ENST00000315285 SPECC1Q5M775 1068 aa15.68■□□□□ 0.1
SPAST-201ENST00000315285 KBTBD3Q8NAB2 608 aa15.68■□□□□ 0.1
SPAST-201ENST00000315285 NAPAP54920 295 aa15.68■□□□□ 0.1
SPAST-201ENST00000315285 LEO1Q8WVC0 666 aaPredicted RBP15.68■□□□□ 0.1
SPAST-201ENST00000315285 PHF23Q9BUL5 403 aaPredicted RBP15.68■□□□□ 0.1
SPAST-201ENST00000315285 USP44Q9H0E7 712 aa15.68■□□□□ 0.1
SPAST-201ENST00000315285 TMEM63CQ9P1W3 806 aa15.68■□□□□ 0.1
SPAST-201ENST00000315285 MBD4O95243 580 aa15.68■□□□□ 0.1
SPAST-201ENST00000315285 GCKRQ14397 625 aa15.68■□□□□ 0.1
SPAST-201ENST00000315285 SYT10Q6XYQ8 523 aa15.68■□□□□ 0.1
SPAST-201ENST00000315285 STXBP4Q6ZWJ1 553 aa15.67■□□□□ 0.1
SPAST-201ENST00000315285 BCCIPQ9P287 314 aaKnown RBP eCLIP15.67■□□□□ 0.1
SPAST-201ENST00000315285 SSH3Q8TE77 659 aa15.67■□□□□ 0.1
SPAST-201ENST00000315285 TM6SF1Q9BZW5 370 aa15.67■□□□□ 0.1
SPAST-201ENST00000315285 SYNMO15061 1565 aa15.67■□□□□ 0.1
SPAST-201ENST00000315285 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.67■□□□□ 0.1
SPAST-201ENST00000315285 DTNBO60941 627 aa15.67■□□□□ 0.1
SPAST-201ENST00000315285 DESP17661 470 aa15.67■□□□□ 0.1
SPAST-201ENST00000315285 SPAG5Q96R06 1193 aa15.67■□□□□ 0.1
SPAST-201ENST00000315285 KDM5DQ9BY66 1539 aa15.67■□□□□ 0.1
SPAST-201ENST00000315285 CTAGE9A4FU28 777 aa15.67■□□□□ 0.1
SPAST-201ENST00000315285 CABP5Q9NP86 173 aa15.67■□□□□ 0.1
SPAST-201ENST00000315285 GSTTP1A0A1W2PQM5 241 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 B4E1Z4 1266 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 TBCAO75347 108 aaKnown RBP15.66■□□□□ 0.1
SPAST-201ENST00000315285 MCM6Q14566 821 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 APPBP2Q92624 585 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 PRPF4BQ13523 1007 aaKnown RBP15.66■□□□□ 0.1
SPAST-201ENST00000315285 DDB1Q16531 1140 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 ANO1Q5XXA6 986 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 CDC37L1Q7L3B6 337 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 CEP112Q8N8E3 955 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 ZKSCAN3Q9BRR0 538 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 MCM9Q9NXL9 1143 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 ZNF219Q9P2Y4 722 aaPredicted RBP15.66■□□□□ 0.1
SPAST-201ENST00000315285 IQUBQ8NA54 791 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 TMEM87BQ96K49 555 aa15.66■□□□□ 0.1
SPAST-201ENST00000315285 ERMNQ8TAM6 284 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 GOLGA1Q92805 767 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 XAGE2Q96GT9 111 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 CCDC94Q9BW85 323 aaPredicted RBP15.65■□□□□ 0.1
SPAST-201ENST00000315285 CBX8Q9HC52 389 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 NDUFB9Q9Y6M9 179 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 SSH2Q76I76 1423 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 KARSQ15046 597 aaKnown RBP15.65■□□□□ 0.1
SPAST-201ENST00000315285 ZNF594Q96JF6 807 aaPredicted RBP15.65■□□□□ 0.1
SPAST-201ENST00000315285 C6orf50Q9HD87 102 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 ANGEL1Q9UNK9 670 aaKnown RBP15.65■□□□□ 0.1
SPAST-201ENST00000315285 MCM7P33993 719 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 RILPL1Q5EBL4 403 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 FAM107BQ9H098 131 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 MACROD2A1Z1Q3 448 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 MAP2K1Q02750 393 aaPredicted RBP15.65■□□□□ 0.1
SPAST-201ENST00000315285 SYCP3Q8IZU3 236 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 DRC1Q96MC2 740 aa15.65■□□□□ 0.1
SPAST-201ENST00000315285 ZMYND15Q9H091 742 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms