RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 NECTIN1Q15223 517 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 DSCC1Q9BVC3 393 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 LRRC7Q96NW7 1537 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 CROCC2H7BZ55 1655 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 ADORA1P30542 326 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 CLCN1P35523 988 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 MCM9Q9NXL9 1143 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 HEG1Q9ULI3 1381 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 SF3B2Q13435 895 aaKnown RBP7.15□□□□□ -1.26
PRKDC-201ENST00000314191 MAP3K15Q6ZN16 1313 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 HSP90AA4PQ58FG1 418 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 LUZP1Q86V48 1076 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 MAGEC2Q9UBF1 373 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-201ENST00000314191 HIBADHP31937 336 aaKnown RBP7.15□□□□□ -1.26
PRKDC-201ENST00000314191 FRMPD1Q5SYB0 1578 aa7.15□□□□□ -1.26
PRKDC-201ENST00000314191 SPATA5Q8NB90 893 aa7.15□□□□□ -1.27
PRKDC-201ENST00000314191 NOC3LQ8WTT2 800 aaKnown RBP7.15□□□□□ -1.27
PRKDC-201ENST00000314191 IQSEC2Q5JU85 1478 aa7.15□□□□□ -1.27
PRKDC-201ENST00000314191 A0A0U1RQG5 324 aaPredicted RBP7.15□□□□□ -1.27
PRKDC-201ENST00000314191 CUL4AQ13619 759 aa7.15□□□□□ -1.27
PRKDC-201ENST00000314191 CCDC112Q8NEF3 446 aa7.15□□□□□ -1.27
PRKDC-201ENST00000314191 DENND2AQ9ULE3 1009 aa7.15□□□□□ -1.27
PRKDC-201ENST00000314191 CCDC96Q2M329 555 aa7.15□□□□□ -1.27
PRKDC-201ENST00000314191 FGAP02671 866 aa7.15□□□□□ -1.27
PRKDC-201ENST00000314191 TRMT1Q9NXH9 659 aaKnown RBP7.15□□□□□ -1.27
PRKDC-201ENST00000314191 WWC3Q9ULE0 1092 aa7.15□□□□□ -1.27
PRKDC-201ENST00000314191 BAG3O95817 575 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 TYRO3Q06418 890 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 GPR108Q9NPR9 543 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 NBPF26B4DH59 902 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 SYKP43405 635 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 ST5P78524 1137 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 NBPF14Q5TI25 921 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 NBPF10Q6P3W6 841 aaKnown RBP7.14□□□□□ -1.27
PRKDC-201ENST00000314191 NLRP10Q86W26 655 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 NBPF15Q8N660 670 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 PHKA1P46020 1223 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 GYG1P46976 350 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 PPFIBP1Q86W92 1011 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 STX1AQ16623 288 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 TRAPPC3LQ5T215 181 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 MTMR6Q9Y217 621 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 LOC102724428A0A0B4J2F2 783 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 AFMP43652 599 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 SIK1P57059 783 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 ZNF445P59923 1031 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 SPTY2D1Q68D10 685 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-201ENST00000314191 BCAMP50895 628 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 KIF2CQ99661 725 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 SNAP23O00161 211 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 TTC6Q86TZ1 520 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 SMARCE1Q969G3 411 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 ZKSCAN5Q9Y2L8 839 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 ADCY9O60503 1353 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 PDE6AP16499 860 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 GNAT2P19087 354 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 HLFQ16534 295 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 ZMYM1Q5SVZ6 1142 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 CCDC43Q96MW1 224 aaKnown RBP7.14□□□□□ -1.27
PRKDC-201ENST00000314191 TNNT1P13805 278 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 USPL1Q5W0Q7 1092 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 GPT2Q8TD30 523 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 VWDEQ8N2E2 1590 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 TANGO6Q9C0B7 1094 aa7.14□□□□□ -1.27
PRKDC-201ENST00000314191 SFPQP23246 707 aaKnown RBP eCLIP7.13□□□□□ -1.27
PRKDC-201ENST00000314191 TMC6Q7Z403 805 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 CHGBP05060 677 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 CRKLP46109 303 aaKnown RBP7.13□□□□□ -1.27
PRKDC-201ENST00000314191 DIS3L2Q8IYB7 885 aaKnown RBP7.13□□□□□ -1.27
PRKDC-201ENST00000314191 PHKBQ93100 1093 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 SSH2Q76I76 1423 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 RGS12O14924 1447 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 TOP1P11387 765 aaKnown RBP7.13□□□□□ -1.27
PRKDC-201ENST00000314191 NAP1L1P55209 391 aaKnown RBP7.13□□□□□ -1.27
PRKDC-201ENST00000314191 KRT40Q6A162 431 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 OSBP2Q969R2 916 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 AGLP35573 1532 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 ANKRD2Q9GZV1 360 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 PIK3C2BO00750 1634 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 LIG1P18858 919 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 NOLC1Q14978 699 aaKnown RBP eCLIP7.13□□□□□ -1.275e-6■■■■□ 19.4
PRKDC-201ENST00000314191 C16orf45Q96MC5 204 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-201ENST00000314191 MAST3O60307 1309 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 ADD1P35611 737 aaKnown RBP7.13□□□□□ -1.27
PRKDC-201ENST00000314191 GSTO1P78417 241 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 ZC3H12CQ9C0D7 883 aaKnown RBP7.13□□□□□ -1.27
PRKDC-201ENST00000314191 CLSTN2Q9H4D0 955 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 CABP5Q9NP86 173 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 ATG3Q9NT62 314 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 PFKFB2O60825 505 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 TSPY3P0CV98 308 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 TSPY8P0CW00 308 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 CHRNDQ07001 517 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 TMX1Q9H3N1 280 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 PDE8BO95263 885 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 LDHBP07195 334 aaKnown RBP7.13□□□□□ -1.27
PRKDC-201ENST00000314191 HEATR3Q7Z4Q2 680 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 BRAPQ7Z569 592 aa7.13□□□□□ -1.27
PRKDC-201ENST00000314191 V9GY48 417 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-201ENST00000314191 ZNF274Q96GC6 653 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms