RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 PUS3Q9BZE2 481 aaKnown RBP15.71■□□□□ 0.11
NPAS4-201ENST00000311034 DDX21Q9NR30 783 aaKnown RBP eCLIP15.71■□□□□ 0.11
NPAS4-201ENST00000311034 ZNF609O15014 1411 aa15.71■□□□□ 0.11
NPAS4-201ENST00000311034 KRT28Q7Z3Y7 464 aa15.71■□□□□ 0.11
NPAS4-201ENST00000311034 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
NPAS4-201ENST00000311034 NUP133Q8WUM0 1156 aa15.71■□□□□ 0.11
NPAS4-201ENST00000311034 ZKSCAN3Q9BRR0 538 aa15.71■□□□□ 0.11
NPAS4-201ENST00000311034 INCENPQ9NQS7 918 aa15.71■□□□□ 0.11
NPAS4-201ENST00000311034 CLCN6P51797 869 aa15.71■□□□□ 0.1
NPAS4-201ENST00000311034 BMS1Q14692 1282 aaKnown RBP15.71■□□□□ 0.1
NPAS4-201ENST00000311034 LRRC24Q50LG9 513 aa15.71■□□□□ 0.1
NPAS4-201ENST00000311034 UTP14AQ9BVJ6 771 aaKnown RBP15.71■□□□□ 0.1
NPAS4-201ENST00000311034 ZNF446Q9NWS9 450 aa15.71■□□□□ 0.1
NPAS4-201ENST00000311034 hCG_1642624A0A1W2PR95 340 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 ATP5JP18859 108 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 KLHL10Q6JEL2 608 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 NAA16Q6N069 864 aaPredicted RBP15.7■□□□□ 0.1
NPAS4-201ENST00000311034 TMCO3Q6UWJ1 677 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 NBPF11Q86T75 865 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 GPIHBP1Q8IV16 184 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 CCDC34Q96HJ3 373 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 PLEKHG1Q9ULL1 1385 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 GOLGA8BA8MQT2 603 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 E7EWF7 191 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 TTLL7Q6ZT98 887 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 KIAA1468Q9P260 1216 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 CEMIPQ8WUJ3 1361 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 AGLP35573 1532 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 COBLO75128 1261 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 TTC39AQ5SRH9 613 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 CARD6Q9BX69 1037 aa15.7■□□□□ 0.1
NPAS4-201ENST00000311034 ORC3Q9UBD5 711 aaPredicted RBP15.7■□□□□ 0.1
NPAS4-201ENST00000311034 SPTLC2O15270 562 aa15.69■□□□□ 0.1
NPAS4-201ENST00000311034 TEX35Q5T0J7 233 aa15.69■□□□□ 0.1
NPAS4-201ENST00000311034 ZNF790Q6PG37 636 aa15.69■□□□□ 0.1
NPAS4-201ENST00000311034 TIGD1Q96MW7 591 aa15.69■□□□□ 0.1
NPAS4-201ENST00000311034 AIFM3Q96NN9 605 aa15.69■□□□□ 0.1
NPAS4-201ENST00000311034 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.69■□□□□ 0.1
NPAS4-201ENST00000311034 PDIA3P30101 505 aaKnown RBP15.69■□□□□ 0.1
NPAS4-201ENST00000311034 TAF3Q5VWG9 929 aa15.69■□□□□ 0.1
NPAS4-201ENST00000311034 ARGLU1Q9NWB6 273 aaPredicted RBP15.69■□□□□ 0.1
NPAS4-201ENST00000311034 PAG1Q9NWQ8 432 aa15.69■□□□□ 0.1
NPAS4-201ENST00000311034 KLF18A0A0U1RQI7 1052 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 KIF2AO00139 706 aaPredicted RBP15.68■□□□□ 0.1
NPAS4-201ENST00000311034 CCDC150Q8NCX0 1101 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 NEK11Q8NG66 645 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 ZNF202O95125 648 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 UBASH3AP57075 661 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 FANCCQ00597 558 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 PTPN12Q05209 780 aaKnown RBP15.68■□□□□ 0.1
NPAS4-201ENST00000311034 ENGASEQ8NFI3 743 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 SMARCC2Q8TAQ2 1214 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 TBX22Q9Y458 520 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 FMN2Q9NZ56 1722 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 HMGB1P09429 215 aaKnown RBP15.68■□□□□ 0.1
NPAS4-201ENST00000311034 FMR1NBQ8N0W7 255 aaPredicted RBP15.68■□□□□ 0.1
NPAS4-201ENST00000311034 PHKBQ93100 1093 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 CNNM1Q9NRU3 951 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 CEP126Q9P2H0 1117 aa15.68■□□□□ 0.1
NPAS4-201ENST00000311034 CCDC57Q2TAC2 916 aa15.67■□□□□ 0.1
NPAS4-201ENST00000311034 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
NPAS4-201ENST00000311034 LLPHQ9BRT6 129 aaKnown RBP15.67■□□□□ 0.1
NPAS4-201ENST00000311034 JAG2Q9Y219 1238 aa15.67■□□□□ 0.1
NPAS4-201ENST00000311034 CARMIL3Q8ND23 1372 aa15.67■□□□□ 0.1
NPAS4-201ENST00000311034 AMOTQ4VCS5 1084 aa15.67■□□□□ 0.1
NPAS4-201ENST00000311034 USPL1Q5W0Q7 1092 aa15.67■□□□□ 0.1
NPAS4-201ENST00000311034 KLHL34Q8N239 644 aa15.67■□□□□ 0.1
NPAS4-201ENST00000311034 KBTBD3Q8NAB2 608 aa15.67■□□□□ 0.1
NPAS4-201ENST00000311034 TRDNQ13061 729 aa15.66■□□□□ 0.1
NPAS4-201ENST00000311034 TSGA10IPQ3SY00 556 aa15.66■□□□□ 0.1
NPAS4-201ENST00000311034 ZCCHC17Q9NP64 241 aaKnown RBP15.66■□□□□ 0.1
NPAS4-201ENST00000311034 HSPD1P10809 573 aaKnown RBP15.66■□□□□ 0.1
NPAS4-201ENST00000311034 ADALQ6DHV7 355 aa15.66■□□□□ 0.1
NPAS4-201ENST00000311034 DPF2Q92785 391 aa15.66■□□□□ 0.1
NPAS4-201ENST00000311034 ANKLE2Q86XL3 938 aa15.66■□□□□ 0.1
NPAS4-201ENST00000311034 ALDH8A1Q9H2A2 487 aaPredicted RBP15.66■□□□□ 0.1
NPAS4-201ENST00000311034 PNMA6AP0CW24 399 aaPredicted RBP15.65■□□□□ 0.1
NPAS4-201ENST00000311034 TOP1P11387 765 aaKnown RBP15.65■□□□□ 0.1
NPAS4-201ENST00000311034 PFKFB1P16118 471 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 GNG11P61952 73 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 HAUS7Q99871 368 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 ATF3P18847 181 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 PNOCQ13519 176 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 LINC00301Q8NCQ3 95 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 METTL22Q9BUU2 404 aaPredicted RBP15.65■□□□□ 0.1
NPAS4-201ENST00000311034 PRDM11Q9NQV5 511 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 DENND2AQ9ULE3 1009 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 ERBB3P21860 1342 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 GYS2P54840 703 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 EVCP57679 992 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
NPAS4-201ENST00000311034 DIP2BQ9P265 1576 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 ABCF2Q9UG63 623 aa15.65■□□□□ 0.1
NPAS4-201ENST00000311034 TMEM232C9JQI7 657 aa15.64■□□□□ 0.09
NPAS4-201ENST00000311034 SYKP43405 635 aa15.64■□□□□ 0.09
NPAS4-201ENST00000311034 KARSQ15046 597 aaKnown RBP15.64■□□□□ 0.09
NPAS4-201ENST00000311034 CACNA1FO60840 1977 aa15.64■□□□□ 0.09
NPAS4-201ENST00000311034 RGPD8O14715 1765 aaPredicted RBP15.64■□□□□ 0.09
NPAS4-201ENST00000311034 PRC1O43663 620 aa15.64■□□□□ 0.09
NPAS4-201ENST00000311034 FDPSP14324 419 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms