RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 FOXR1Q6PIV2 292 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 SIL1Q9H173 461 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 PHAXQ9H814 394 aaKnown RBP20.88■□□□□ 0.93
SPSB4-201ENST00000310546 SLIT3O75094 1523 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 PHRF1Q9P1Y6 1649 aaKnown RBP20.87■□□□□ 0.93
SPSB4-201ENST00000310546 KCNJ6P48051 423 aa20.87■□□□□ 0.93
SPSB4-201ENST00000310546 PIP4K2AP48426 406 aaPredicted RBP20.87■□□□□ 0.93
SPSB4-201ENST00000310546 GPATCH11Q8N954 259 aa20.87■□□□□ 0.93
SPSB4-201ENST00000310546 CERKQ8TCT0 537 aa20.87■□□□□ 0.93
SPSB4-201ENST00000310546 ZSWIM4Q9H7M6 989 aa20.87■□□□□ 0.93
SPSB4-201ENST00000310546 C1orf141Q5JVX7 400 aa20.87■□□□□ 0.93
SPSB4-201ENST00000310546 ENGASEQ8NFI3 743 aa20.87■□□□□ 0.93
SPSB4-201ENST00000310546 RCOR1Q9UKL0 485 aa20.87■□□□□ 0.93
SPSB4-201ENST00000310546 A0A1B0GVL5 298 aa20.86■□□□□ 0.93
SPSB4-201ENST00000310546 ADD1P35611 737 aaKnown RBP20.86■□□□□ 0.93
SPSB4-201ENST00000310546 PPP2R3AQ06190 1150 aa20.86■□□□□ 0.93
SPSB4-201ENST00000310546 LONRF2Q1L5Z9 754 aa20.86■□□□□ 0.93
SPSB4-201ENST00000310546 EVI5LQ96CN4 794 aa20.86■□□□□ 0.93
SPSB4-201ENST00000310546 PLEKHG2Q9H7P9 1386 aa20.86■□□□□ 0.93
SPSB4-201ENST00000310546 GNG11P61952 73 aa20.86■□□□□ 0.93
SPSB4-201ENST00000310546 CHRM1P11229 460 aaPredicted RBP20.85■□□□□ 0.93
SPSB4-201ENST00000310546 ISM2Q6H9L7 571 aa20.85■□□□□ 0.93
SPSB4-201ENST00000310546 RAPGEF4Q8WZA2 1011 aa20.85■□□□□ 0.93
SPSB4-201ENST00000310546 PSD3Q9NYI0 1048 aa20.85■□□□□ 0.93
SPSB4-201ENST00000310546 PLEKHO1Q53GL0 409 aaPredicted RBP20.85■□□□□ 0.93
SPSB4-201ENST00000310546 GPATCH3Q96I76 525 aa20.85■□□□□ 0.93
SPSB4-201ENST00000310546 WDR24Q96S15 920 aa20.85■□□□□ 0.93
SPSB4-201ENST00000310546 PDE11AQ9HCR9 933 aa20.85■□□□□ 0.93
SPSB4-201ENST00000310546 SPATA31A3Q5VYP0 1347 aa20.85■□□□□ 0.93
SPSB4-201ENST00000310546 A0A0D9SFI3 127 aa20.84■□□□□ 0.93
SPSB4-201ENST00000310546 IVLP07476 585 aa20.84■□□□□ 0.93
SPSB4-201ENST00000310546 SART3Q15020 963 aaKnown RBP20.84■□□□□ 0.93
SPSB4-201ENST00000310546 LRRC2Q9BYS8 371 aa20.84■□□□□ 0.93
SPSB4-201ENST00000310546 RGPD5Q99666 1765 aa20.84■□□□□ 0.93
SPSB4-201ENST00000310546 BTBD11A6QL63 1104 aa20.84■□□□□ 0.93
SPSB4-201ENST00000310546 GUCY2CP25092 1073 aa20.84■□□□□ 0.93
SPSB4-201ENST00000310546 GUCY1B3Q02153 619 aa20.84■□□□□ 0.93
SPSB4-201ENST00000310546 HSP90AB4PQ58FF6 505 aa20.84■□□□□ 0.93
SPSB4-201ENST00000310546 ATP1A3P13637 1013 aa20.84■□□□□ 0.93
SPSB4-201ENST00000310546 MAGEA9P43362 315 aa20.84■□□□□ 0.93
SPSB4-201ENST00000310546 A0A0G2JS52 829 aa20.83■□□□□ 0.93
SPSB4-201ENST00000310546 EIF3CLB5ME19 914 aaKnown RBP20.83■□□□□ 0.93
SPSB4-201ENST00000310546 EIF3CQ99613 913 aaKnown RBP20.83■□□□□ 0.93
SPSB4-201ENST00000310546 ROBO1Q9Y6N7 1651 aa20.83■□□□□ 0.92
SPSB4-201ENST00000310546 AACSQ86V21 672 aa20.83■□□□□ 0.92
SPSB4-201ENST00000310546 KIAA1468Q9P260 1216 aa20.83■□□□□ 0.92
SPSB4-201ENST00000310546 PIP4K2BP78356 416 aa20.82■□□□□ 0.92
SPSB4-201ENST00000310546 FANCCQ00597 558 aa20.82■□□□□ 0.92
SPSB4-201ENST00000310546 TOM1L2Q6ZVM7 507 aa20.82■□□□□ 0.92
SPSB4-201ENST00000310546 MYCBPQ99417 103 aaPredicted RBP20.82■□□□□ 0.92
SPSB4-201ENST00000310546 E2F4Q16254 413 aa20.82■□□□□ 0.92
SPSB4-201ENST00000310546 IQUBQ8NA54 791 aa20.82■□□□□ 0.92
SPSB4-201ENST00000310546 NCAPGQ9BPX3 1015 aa20.82■□□□□ 0.92
SPSB4-201ENST00000310546 PA2G4Q9UQ80 394 aaKnown RBP20.82■□□□□ 0.92
SPSB4-201ENST00000310546 ALS2Q96Q42 1657 aa20.82■□□□□ 0.92
SPSB4-201ENST00000310546 VWA3AA6NCI4 1184 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 Q6ZUG5 572 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 FSD1Q9BTV5 496 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 NDUFA8P51970 172 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 HDGFL1Q5TGJ6 251 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 BRMS1Q9HCU9 246 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 USP42Q9H9J4 1324 aaKnown RBP20.81■□□□□ 0.92
SPSB4-201ENST00000310546 ZSCAN12O43309 604 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 N4BP1O75113 896 aaKnown RBP20.81■□□□□ 0.92
SPSB4-201ENST00000310546 SERPINC1P01008 464 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 MAP3K9P80192 1104 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 SKIDA1Q1XH10 827 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 CFAP100Q494V2 611 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 MRPS27Q92552 414 aaKnown RBP20.81■□□□□ 0.92
SPSB4-201ENST00000310546 RABGGTAQ92696 567 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 MPHOSPH8Q99549 860 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 DEF6Q9H4E7 631 aa20.81■□□□□ 0.92
SPSB4-201ENST00000310546 MED1Q15648 1581 aaPredicted RBP20.81■□□□□ 0.92
SPSB4-201ENST00000310546 CEMIPQ8WUJ3 1361 aa20.8■□□□□ 0.92
SPSB4-201ENST00000310546 RSRC2Q7L4I2 434 aaKnown RBP20.8■□□□□ 0.92
SPSB4-201ENST00000310546 ZNF589Q86UQ0 364 aaPredicted RBP20.8■□□□□ 0.92
SPSB4-201ENST00000310546 FMR1NBQ8N0W7 255 aaPredicted RBP20.8■□□□□ 0.92
SPSB4-201ENST00000310546 PPP2R2CQ9Y2T4 447 aa20.8■□□□□ 0.92
SPSB4-201ENST00000310546 PHACTR2O75167 634 aa20.8■□□□□ 0.92
SPSB4-201ENST00000310546 SCRN1Q12765 414 aa20.8■□□□□ 0.92
SPSB4-201ENST00000310546 DHX8Q14562 1220 aaKnown RBP20.8■□□□□ 0.92
SPSB4-201ENST00000310546 GOLGA1Q92805 767 aa20.8■□□□□ 0.92
SPSB4-201ENST00000310546 PCDHA7Q9UN72 937 aa20.8■□□□□ 0.92
SPSB4-201ENST00000310546 MRFAP1Q9Y605 127 aa20.8■□□□□ 0.92
SPSB4-201ENST00000310546 UBAP1LF5GYI3 381 aa20.79■□□□□ 0.92
SPSB4-201ENST00000310546 TOM1O60784 492 aa20.79■□□□□ 0.92
SPSB4-201ENST00000310546 UBASH3AP57075 661 aa20.79■□□□□ 0.92
SPSB4-201ENST00000310546 APOBRQ0VD83 1088 aa20.79■□□□□ 0.92
SPSB4-201ENST00000310546 ZNF396Q96N95 335 aaPredicted RBP20.79■□□□□ 0.92
SPSB4-201ENST00000310546 BOLA2Q9H3K6 86 aa20.79■□□□□ 0.92
SPSB4-201ENST00000310546 PLEKHA4Q9H4M7 779 aa20.79■□□□□ 0.92
SPSB4-201ENST00000310546 WWC2Q6AWC2 1192 aa20.79■□□□□ 0.92
SPSB4-201ENST00000310546 DPF2Q92785 391 aa20.79■□□□□ 0.92
SPSB4-201ENST00000310546 CCDC151A5D8V7 595 aa20.78■□□□□ 0.92
SPSB4-201ENST00000310546 TXLNAP40222 546 aa20.78■□□□□ 0.92
SPSB4-201ENST00000310546 AIMP1Q12904 312 aaKnown RBP20.78■□□□□ 0.92
SPSB4-201ENST00000310546 ERC1Q8IUD2 1116 aa20.78■□□□□ 0.92
SPSB4-201ENST00000310546 DHX58Q96C10 678 aa20.78■□□□□ 0.92
SPSB4-201ENST00000310546 CCDC8Q9H0W5 538 aaPredicted RBP20.78■□□□□ 0.92
SPSB4-201ENST00000310546 FAN1Q9Y2M0 1017 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms