RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 MED23Q9ULK4 1368 aa8.42□□□□□ -1.06
PTCD2-201ENST00000308077 LTBP1Q14766 1721 aa8.42□□□□□ -1.06
PTCD2-201ENST00000308077 HIP1O00291 1037 aa8.42□□□□□ -1.06
PTCD2-201ENST00000308077 KLRK1P26718 216 aa8.42□□□□□ -1.06
PTCD2-201ENST00000308077 HOXA10P31260 410 aaPredicted RBP8.42□□□□□ -1.06
PTCD2-201ENST00000308077 FKBP4Q02790 459 aaKnown RBP eCLIP8.42□□□□□ -1.06
PTCD2-201ENST00000308077 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
PTCD2-201ENST00000308077 RBM17Q96I25 401 aaKnown RBP8.42□□□□□ -1.06
PTCD2-201ENST00000308077 BRIP1Q9BX63 1249 aa8.42□□□□□ -1.06
PTCD2-201ENST00000308077 RASGRF1Q13972 1273 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 ZNF589Q86UQ0 364 aaPredicted RBP8.41□□□□□ -1.06
PTCD2-201ENST00000308077 RUFY2Q8WXA3 655 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 COL1A1P02452 1464 aaPredicted RBP8.41□□□□□ -1.06
PTCD2-201ENST00000308077 ZNF804BA4D1E1 1349 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 RAD50Q92878 1312 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 IRS2Q9Y4H2 1338 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 MYH13Q9UKX3 1938 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 CYP2E1P05181 493 aaPredicted RBP8.41□□□□□ -1.06
PTCD2-201ENST00000308077 UQCRFS1P1P0C7P4 283 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 GYG1P46976 350 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 CRAMP1Q96RY5 1269 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 SEC62Q99442 399 aaKnown RBP8.41□□□□□ -1.06
PTCD2-201ENST00000308077 ANKRD2Q9GZV1 360 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 NMRK2Q9NPI5 230 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 HMG20BQ9P0W2 317 aa8.41□□□□□ -1.06
PTCD2-201ENST00000308077 SRGNP10124 158 aa8.4□□□□□ -1.06
PTCD2-201ENST00000308077 SLC4A3P48751 1232 aa8.4□□□□□ -1.06
PTCD2-201ENST00000308077 PTH1RQ03431 593 aa8.4□□□□□ -1.06
PTCD2-201ENST00000308077 FAM84BQ96KN1 310 aaPredicted RBP8.4□□□□□ -1.06
PTCD2-201ENST00000308077 PIH1D3Q9NQM4 214 aaKnown RBP8.4□□□□□ -1.06
PTCD2-201ENST00000308077 PALD1Q9ULE6 856 aa8.4□□□□□ -1.06
PTCD2-201ENST00000308077 EPB41L2O43491 1005 aaKnown RBP8.39□□□□□ -1.07
PTCD2-201ENST00000308077 GPSM2P81274 684 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 ZMYM1Q5SVZ6 1142 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 CCDC129Q6ZRS4 1044 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 TXNRD3Q86VQ6 643 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 SPATA5Q8NB90 893 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 IQSEC3Q9UPP2 1182 aaPredicted RBP8.39□□□□□ -1.07
PTCD2-201ENST00000308077 CCDC171Q6TFL3 1326 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 RNF113AO15541 343 aaKnown RBP8.39□□□□□ -1.07
PTCD2-201ENST00000308077 BBOX1O75936 387 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 NPR1P16066 1061 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 PDE6BP35913 854 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 KCNJ4P48050 445 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 FBXO33Q7Z6M2 555 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 TICAM2Q86XR7 235 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 MCOLN1Q9GZU1 580 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 XDHP47989 1333 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 DUOX1Q9NRD9 1551 aa8.39□□□□□ -1.07
PTCD2-201ENST00000308077 DLEC1Q9Y238 1755 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 M0R2C6 588 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 HSPA4P34932 840 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 MCMDC2Q4G0Z9 681 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 NLGN2Q8NFZ4 835 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 OSBP2Q969R2 916 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 GPR101Q96P66 508 aaPredicted RBP8.38□□□□□ -1.07
PTCD2-201ENST00000308077 ANKIB1Q9P2G1 1089 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 LEMD3Q9Y2U8 911 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 MAST3O60307 1309 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 SLX4Q8IY92 1834 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 CD2BP2O95400 341 aaKnown RBP8.38□□□□□ -1.07
PTCD2-201ENST00000308077 TTF1Q15361 905 aaPredicted RBP8.38□□□□□ -1.07
PTCD2-201ENST00000308077 CAVIN4Q5BKX8 364 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 OLFM4Q6UX06 510 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 KIAA1211Q6ZU35 1233 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 MAP4K1Q92918 833 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 IL17RAQ96F46 866 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 MASTLQ96GX5 879 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 TBC1D2Q9BYX2 928 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 HELLSQ9NRZ9 838 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 KIF13BQ9NQT8 1826 aa8.38□□□□□ -1.07
PTCD2-201ENST00000308077 MCCP23508 829 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 ADD2P35612 726 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 UTRNP46939 3433 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 C2CD5Q86YS7 1000 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 SP8Q8IXZ3 490 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 SLC16A10Q8TF71 515 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 PODXL2Q9NZ53 605 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 NSFL1CQ9UNZ2 370 aaKnown RBP8.37□□□□□ -1.07
PTCD2-201ENST00000308077 TCRBV5S4A2TA0A5A2 114 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 IDH1O75874 414 aaKnown RBP8.37□□□□□ -1.07
PTCD2-201ENST00000308077 UFL1O94874 794 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 ZFYP08048 801 aaPredicted RBP8.37□□□□□ -1.07
PTCD2-201ENST00000308077 PDE6AP16499 860 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 CHRNA5P30532 468 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 HIBADHP31937 336 aaKnown RBP8.37□□□□□ -1.07
PTCD2-201ENST00000308077 ANAPC15P60006 121 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 NECTIN1Q15223 517 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 RABEP1Q15276 862 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 C15orf52Q6ZUT6 534 aaKnown RBP8.37□□□□□ -1.07
PTCD2-201ENST00000308077 TMC4Q7Z404 712 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 VPS37DQ86XT2 251 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 RASEFQ8IZ41 740 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 APPBP2Q92624 585 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 PUS7LQ9H0K6 701 aaKnown RBP8.37□□□□□ -1.07
PTCD2-201ENST00000308077 GNL3LQ9NVN8 582 aaKnown RBP8.37□□□□□ -1.07
PTCD2-201ENST00000308077 POLLQ9UGP5 575 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 ATP6V0A2Q9Y487 856 aa8.37□□□□□ -1.07
PTCD2-201ENST00000308077 RBM8AQ9Y5S9 174 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms