RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 NFXL1Q6ZNB6 911 aa7.37□□□□□ -1.23
SCAPER-201ENST00000303521 SCAND2PQ9GZW5 306 aaPredicted RBP7.37□□□□□ -1.23
SCAPER-201ENST00000303521 MKNK2Q9HBH9 465 aa7.37□□□□□ -1.23
SCAPER-201ENST00000303521 CLIP2Q9UDT6 1046 aa7.37□□□□□ -1.23
SCAPER-201ENST00000303521 CTNNA3Q9UI47 895 aa7.37□□□□□ -1.23
SCAPER-201ENST00000303521 PTPRCP08575 1304 aa7.37□□□□□ -1.23
SCAPER-201ENST00000303521 RPS8P62241 208 aaKnown RBP7.37□□□□□ -1.23
SCAPER-201ENST00000303521 TMEM132AQ24JP5 1023 aa7.37□□□□□ -1.23
SCAPER-201ENST00000303521 CEP135Q66GS9 1140 aa7.37□□□□□ -1.23
SCAPER-201ENST00000303521 ZNF397Q8NF99 534 aaPredicted RBP7.37□□□□□ -1.23
SCAPER-201ENST00000303521 FHDC1Q9C0D6 1143 aaPredicted RBP7.37□□□□□ -1.23
SCAPER-201ENST00000303521 TSPYL2Q9H2G4 693 aaPredicted RBP7.37□□□□□ -1.23
SCAPER-201ENST00000303521 TECPR2O15040 1411 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 CPLX1O14810 134 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 ZEB2O60315 1214 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 GPHNQ9NQX3 736 aaPredicted RBP7.36□□□□□ -1.23
SCAPER-201ENST00000303521 PDRG1Q9NUG6 133 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 SURF6O75683 361 aaKnown RBP7.36□□□□□ -1.23
SCAPER-201ENST00000303521 LDHBP07195 334 aaKnown RBP7.36□□□□□ -1.23
SCAPER-201ENST00000303521 LARP1BQ659C4 914 aaKnown RBP7.36□□□□□ -1.23
SCAPER-201ENST00000303521 KNDC1Q76NI1 1749 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 PPP4R3AQ6IN85 833 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 KSR2Q6VAB6 950 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 PDILTQ8N807 584 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 KCNH4Q9UQ05 1017 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 NR2E3Q9Y5X4 410 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 XDHP47989 1333 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 ARHGEF28Q8N1W1 1705 aaKnown RBP7.36□□□□□ -1.23
SCAPER-201ENST00000303521 TRIM27P14373 513 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 MCM3P25205 808 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 SSH1Q8WYL5 1049 aa7.36□□□□□ -1.23
SCAPER-201ENST00000303521 RNF216Q9NWF9 866 aaPredicted RBP7.36□□□□□ -1.23
SCAPER-201ENST00000303521 PIP4K2AP48426 406 aaPredicted RBP7.35□□□□□ -1.23
SCAPER-201ENST00000303521 ANO10Q9NW15 660 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 NOD1Q9Y239 953 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 TTC22Q5TAA0 569 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 IQCEQ6IPM2 695 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 NBPF15Q8N660 670 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 CCDC47Q96A33 483 aaKnown RBP7.35□□□□□ -1.23
SCAPER-201ENST00000303521 NBPF3Q9H094 633 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 RNF41Q9H4P4 317 aaPredicted RBP7.35□□□□□ -1.23
SCAPER-201ENST00000303521 IVLP07476 585 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 TDO2P48775 406 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 FSTL1Q12841 308 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 FILIP1LQ4L180 1135 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 CDC37L1Q7L3B6 337 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 UPF3BQ9BZI7 483 aaKnown RBP7.35□□□□□ -1.23
SCAPER-201ENST00000303521 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.35□□□□□ -1.23
SCAPER-201ENST00000303521 SETBP1Q9Y6X0 1596 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 MX1P20591 662 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 HIBADHP31937 336 aaKnown RBP7.35□□□□□ -1.23
SCAPER-201ENST00000303521 MTHFSDQ2M296 383 aaKnown RBP7.35□□□□□ -1.23
SCAPER-201ENST00000303521 JMYQ8N9B5 988 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 CCDC150Q8NCX0 1101 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 CAGE1Q8TC20 777 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 COA7Q96BR5 231 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 ARHGEF10LQ9HCE6 1279 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 PCDHB15Q9Y5E8 787 aa7.35□□□□□ -1.23
SCAPER-201ENST00000303521 ZC3H4Q9UPT8 1303 aaKnown RBP7.35□□□□□ -1.23
SCAPER-201ENST00000303521 GOLGA6L9A6NEM1 432 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 RGL2O15211 777 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 SFPQP23246 707 aaKnown RBP eCLIP7.34□□□□□ -1.23
SCAPER-201ENST00000303521 ELMSAN1Q6PJG2 1045 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 SYNE4Q8N205 404 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 ARHGAP45Q92619 1136 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 TEKT1Q969V4 418 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 C16orf45Q96MC5 204 aaPredicted RBP7.34□□□□□ -1.23
SCAPER-201ENST00000303521 MAP3K15Q6ZN16 1313 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 SERPINC1P01008 464 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 ANAPC15P60006 121 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 FAM193AP78312 1265 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 PDE4BQ07343 736 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 GTF3C2Q8WUA4 911 aaPredicted RBP7.34□□□□□ -1.23
SCAPER-201ENST00000303521 PIBF1Q8WXW3 757 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 LBHD1Q9BQE6 289 aaPredicted RBP7.34□□□□□ -1.23
SCAPER-201ENST00000303521 MAP3K2Q9Y2U5 619 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 IARSP41252 1262 aaKnown RBP7.34□□□□□ -1.23
SCAPER-201ENST00000303521 DMTNQ08495 405 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 DDX11Q96FC9 970 aa7.34□□□□□ -1.23
SCAPER-201ENST00000303521 CCDC85AQ96PX6 553 aaPredicted RBP7.34□□□□□ -1.23
SCAPER-201ENST00000303521 C21orf2O43822 256 aa7.34□□□□□ -1.24
SCAPER-201ENST00000303521 RAB11FIP3O75154 756 aa7.34□□□□□ -1.24
SCAPER-201ENST00000303521 IL15P40933 162 aaPredicted RBP7.34□□□□□ -1.24
SCAPER-201ENST00000303521 KRT32Q14532 448 aa7.34□□□□□ -1.24
SCAPER-201ENST00000303521 LINS1Q8NG48 757 aa7.34□□□□□ -1.24
SCAPER-201ENST00000303521 SRRTQ9BXP5 876 aaKnown RBP7.34□□□□□ -1.24
SCAPER-201ENST00000303521 ZFYVE28Q9HCC9 887 aa7.34□□□□□ -1.24
SCAPER-201ENST00000303521 BSDC1Q9NW68 430 aaPredicted RBP7.34□□□□□ -1.24
SCAPER-201ENST00000303521 USP32Q8NFA0 1604 aa7.33□□□□□ -1.24
SCAPER-201ENST00000303521 IBTKQ9P2D0 1353 aaPredicted RBP7.33□□□□□ -1.24
SCAPER-201ENST00000303521 FMNL1O95466 1100 aaPredicted RBP7.33□□□□□ -1.24
SCAPER-201ENST00000303521 SEC24BO95487 1268 aa7.33□□□□□ -1.24
SCAPER-201ENST00000303521 CASQ1P31415 396 aa7.33□□□□□ -1.24
SCAPER-201ENST00000303521 GTF2F1P35269 517 aaKnown RBP eCLIP7.33□□□□□ -1.24
SCAPER-201ENST00000303521 STK38Q15208 465 aa7.33□□□□□ -1.24
SCAPER-201ENST00000303521 SAFBQ15424 915 aaKnown RBP eCLIP7.33□□□□□ -1.24
SCAPER-201ENST00000303521 JAKMIP3Q5VZ66 844 aa7.33□□□□□ -1.24
SCAPER-201ENST00000303521 CHADLQ6NUI6 762 aa7.33□□□□□ -1.24
SCAPER-201ENST00000303521 PIGBQ92521 554 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms