RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ZNF213O14771 459 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 GYG1P46976 350 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 ZNF445P59923 1031 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 LRRFIP1Q32MZ4 808 aaKnown RBP17.22■□□□□ 0.35
SMG8-201ENST00000300917 SPATA5Q8NB90 893 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 RRAGDQ9NQL2 400 aaPredicted RBP17.22■□□□□ 0.35
SMG8-201ENST00000300917 ATP6V1DQ9Y5K8 247 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 MYH14Q7Z406 1995 aaKnown RBP17.22■□□□□ 0.35
SMG8-201ENST00000300917 ADD2P35612 726 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 OTUD7BQ6GQQ9 843 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 MPNDQ8N594 471 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 AIDAQ96BJ3 306 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 NUP98P52948 1817 aa17.21■□□□□ 0.35
SMG8-201ENST00000300917 ZFYP08048 801 aaPredicted RBP17.21■□□□□ 0.35
SMG8-201ENST00000300917 PARP10Q53GL7 1025 aa17.21■□□□□ 0.35
SMG8-201ENST00000300917 RALYLQ86SE5 291 aaKnown RBP17.21■□□□□ 0.35
SMG8-201ENST00000300917 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMG8-201ENST00000300917 ARMT1Q9H993 441 aa17.21■□□□□ 0.35
SMG8-201ENST00000300917 TOMM22Q9NS69 142 aa17.21■□□□□ 0.35
SMG8-201ENST00000300917 ZNF652Q9Y2D9 606 aa17.21■□□□□ 0.35
SMG8-201ENST00000300917 CCDC144CPQ8IYA2 1237 aa17.21■□□□□ 0.35
SMG8-201ENST00000300917 TRIM44Q96DX7 344 aaPredicted RBP17.21■□□□□ 0.35
SMG8-201ENST00000300917 PRC1O43663 620 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 PRKAB2O43741 272 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 MROH5Q6ZUA9 1318 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 PTPDC1A2A3K4 754 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 ANP32BQ92688 251 aaKnown RBP17.2■□□□□ 0.34
SMG8-201ENST00000300917 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMG8-201ENST00000300917 CCNL1Q9UK58 526 aaPredicted RBP17.2■□□□□ 0.34
SMG8-201ENST00000300917 COL22A1Q8NFW1 1626 aaPredicted RBP17.2■□□□□ 0.34
SMG8-201ENST00000300917 MBD4O95243 580 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 EXOSC10Q01780 885 aaKnown RBP17.2■□□□□ 0.34
SMG8-201ENST00000300917 VPS72Q15906 364 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 CAMK4Q16566 473 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 GIMAP6Q6P9H5 292 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 LRSAM1Q6UWE0 723 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
SMG8-201ENST00000300917 GJB4Q9NTQ9 266 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 LRP2BPQ9P2M1 347 aa17.2■□□□□ 0.34
SMG8-201ENST00000300917 PDCP20941 246 aa17.19■□□□□ 0.34
SMG8-201ENST00000300917 RRP12Q5JTH9 1297 aaKnown RBP17.19■□□□□ 0.34
SMG8-201ENST00000300917 CTNNA3Q9UI47 895 aa17.19■□□□□ 0.34
SMG8-201ENST00000300917 BCL9LQ86UU0 1499 aa17.19■□□□□ 0.34
SMG8-201ENST00000300917 CTDNEP1O95476 244 aa17.19■□□□□ 0.34
SMG8-201ENST00000300917 FGFR2P21802 821 aa17.19■□□□□ 0.34
SMG8-201ENST00000300917 KLF18A0A0U1RQI7 1052 aa17.18■□□□□ 0.34
SMG8-201ENST00000300917 HMGB1P09429 215 aaKnown RBP17.18■□□□□ 0.34
SMG8-201ENST00000300917 PDIA3P30101 505 aaKnown RBP17.18■□□□□ 0.34
SMG8-201ENST00000300917 TBC1D10CQ8IV04 446 aa17.18■□□□□ 0.34
SMG8-201ENST00000300917 B4E1Z4 1266 aa17.18■□□□□ 0.34
SMG8-201ENST00000300917 CTDSPL2Q05D32 466 aa17.18■□□□□ 0.34
SMG8-201ENST00000300917 NSUN7Q8NE18 718 aaKnown RBP17.18■□□□□ 0.34
SMG8-201ENST00000300917 KRT85P78386 507 aa17.18■□□□□ 0.34
SMG8-201ENST00000300917 PLCB2Q00722 1185 aa17.18■□□□□ 0.34
SMG8-201ENST00000300917 NBPF5PQ86XG9 351 aaPredicted RBP17.18■□□□□ 0.34
SMG8-201ENST00000300917 VPS37DQ86XT2 251 aa17.18■□□□□ 0.34
SMG8-201ENST00000300917 GOLGA8BA8MQT2 603 aa17.17■□□□□ 0.34
SMG8-201ENST00000300917 ZPR1O75312 459 aa17.17■□□□□ 0.34
SMG8-201ENST00000300917 UQCRFS1P1P0C7P4 283 aa17.17■□□□□ 0.34
SMG8-201ENST00000300917 UBE2HP62256 183 aa17.17■□□□□ 0.34
SMG8-201ENST00000300917 TTF1Q15361 905 aaPredicted RBP17.17■□□□□ 0.34
SMG8-201ENST00000300917 ANKRD18AQ8IVF6 992 aa17.17■□□□□ 0.34
SMG8-201ENST00000300917 SYAP1Q96A49 352 aaPredicted RBP17.17■□□□□ 0.34
SMG8-201ENST00000300917 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
SMG8-201ENST00000300917 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
SMG8-201ENST00000300917 MYL10Q9BUA6 226 aa17.17■□□□□ 0.34
SMG8-201ENST00000300917 BCL2L12Q9HB09 334 aa17.17■□□□□ 0.34
SMG8-201ENST00000300917 SENP2Q9HC62 589 aa17.17■□□□□ 0.34
SMG8-201ENST00000300917 PFKFB2O60825 505 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 KLRK1P26718 216 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 ZSCAN25Q6NSZ9 544 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 ARID4AP29374 1257 aaPredicted RBP17.16■□□□□ 0.34
SMG8-201ENST00000300917 ANTXR2P58335 489 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 MAP3K12Q12852 859 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 PKNOX2Q96KN3 472 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 SPATA32Q96LK8 384 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 ZKSCAN3Q9BRR0 538 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 TFCP2L1Q9NZI6 479 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 RAI14Q9P0K7 980 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 SMIM22K7EJ46 135 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 TRDNQ13061 729 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 NCOA7Q8NI08 942 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 NBPF3Q9H094 633 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 ALDH8A1Q9H2A2 487 aaPredicted RBP17.16■□□□□ 0.34
SMG8-201ENST00000300917 TSPY26PQ9H489 355 aa17.16■□□□□ 0.34
SMG8-201ENST00000300917 LIG1P18858 919 aa17.15■□□□□ 0.34
SMG8-201ENST00000300917 CDC5LQ99459 802 aaKnown RBP17.15■□□□□ 0.34
SMG8-201ENST00000300917 MCM5P33992 734 aa17.15■□□□□ 0.34
SMG8-201ENST00000300917 SLC4A8Q2Y0W8 1093 aa17.15■□□□□ 0.34
SMG8-201ENST00000300917 LCORLQ8N3X6 602 aa17.15■□□□□ 0.34
SMG8-201ENST00000300917 ABCC12Q96J65 1359 aa17.15■□□□□ 0.34
SMG8-201ENST00000300917 NRAPQ86VF7 1730 aa17.15■□□□□ 0.34
SMG8-201ENST00000300917 CYB5R4Q7L1T6 521 aa17.15■□□□□ 0.34
SMG8-201ENST00000300917 NAPBQ9H115 298 aa17.15■□□□□ 0.34
SMG8-201ENST00000300917 SDR42E1Q8WUS8 393 aa17.14■□□□□ 0.33
SMG8-201ENST00000300917 STRBPQ96SI9 672 aaKnown RBP17.14■□□□□ 0.33
SMG8-201ENST00000300917 COL4A1P02462 1669 aa17.14■□□□□ 0.33
SMG8-201ENST00000300917 CPLX1O14810 134 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms