RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 TTF1Q15361 905 aaPredicted RBP30.59■■■□□ 2.49
SDCCAG3-201ENST00000298537 ZNF827Q17R98 1081 aa30.59■■■□□ 2.49
SDCCAG3-201ENST00000298537 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.59■■■□□ 2.49
SDCCAG3-201ENST00000298537 LRRFIP1Q32MZ4 808 aaKnown RBP30.58■■■□□ 2.49
SDCCAG3-201ENST00000298537 BAG4O95429 457 aaKnown RBP30.57■■■□□ 2.48
SDCCAG3-201ENST00000298537 FGAP02671 866 aa30.57■■■□□ 2.48
SDCCAG3-201ENST00000298537 APBA3O96018 575 aa30.56■■■□□ 2.48
SDCCAG3-201ENST00000298537 MAGEB6Q8N7X4 407 aa30.56■■■□□ 2.48
SDCCAG3-201ENST00000298537 COL1A1P02452 1464 aaPredicted RBP30.56■■■□□ 2.48
SDCCAG3-201ENST00000298537 E7EWF7 191 aa30.55■■■□□ 2.48
SDCCAG3-201ENST00000298537 KRT32Q14532 448 aa30.55■■■□□ 2.48
SDCCAG3-201ENST00000298537 GBP4Q96PP9 640 aa30.55■■■□□ 2.48
SDCCAG3-201ENST00000298537 DDR1Q08345 913 aa30.55■■■□□ 2.48
SDCCAG3-201ENST00000298537 UBE4AQ14139 1066 aa30.55■■■□□ 2.48
SDCCAG3-201ENST00000298537 FAM84BQ96KN1 310 aaPredicted RBP30.55■■■□□ 2.48
SDCCAG3-201ENST00000298537 UBE3CQ15386 1083 aa30.54■■■□□ 2.48
SDCCAG3-201ENST00000298537 CHST3Q7LGC8 479 aa30.54■■■□□ 2.48
SDCCAG3-201ENST00000298537 TFCP2L1Q9NZI6 479 aa30.54■■■□□ 2.48
SDCCAG3-201ENST00000298537 ZNF804BA4D1E1 1349 aa30.54■■■□□ 2.48
SDCCAG3-201ENST00000298537 SERPINB2P05120 415 aa30.53■■■□□ 2.48
SDCCAG3-201ENST00000298537 RGS17Q9UGC6 210 aaPredicted RBP30.53■■■□□ 2.48
SDCCAG3-201ENST00000298537 STK3Q13188 491 aa30.53■■■□□ 2.48
SDCCAG3-201ENST00000298537 ZSCAN25Q6NSZ9 544 aa30.53■■■□□ 2.48
SDCCAG3-201ENST00000298537 Q6ZUG5 572 aa30.53■■■□□ 2.48
SDCCAG3-201ENST00000298537 RXRBP28702 533 aa30.52■■■□□ 2.48
SDCCAG3-201ENST00000298537 TXNRD3Q86VQ6 643 aa30.52■■■□□ 2.48
SDCCAG3-201ENST00000298537 LAMA4Q16363 1823 aa30.52■■■□□ 2.48
SDCCAG3-201ENST00000298537 BRD1O95696 1058 aa30.51■■■□□ 2.48
SDCCAG3-201ENST00000298537 IL27Q8NEV9 243 aa30.51■■■□□ 2.48
SDCCAG3-201ENST00000298537 TRAK2O60296 914 aa30.51■■■□□ 2.47
SDCCAG3-201ENST00000298537 DENND2AQ9ULE3 1009 aa30.51■■■□□ 2.47
SDCCAG3-201ENST00000298537 CLEC17AQ6ZS10 378 aa30.5■■■□□ 2.47
SDCCAG3-201ENST00000298537 DDX11L8A8MPP1 907 aa30.5■■■□□ 2.47
SDCCAG3-201ENST00000298537 GSE1Q14687 1217 aa30.5■■■□□ 2.47
SDCCAG3-201ENST00000298537 MCTP1Q6DN14 999 aa30.5■■■□□ 2.47
SDCCAG3-201ENST00000298537 NKX2-3Q8TAU0 364 aa30.5■■■□□ 2.47
SDCCAG3-201ENST00000298537 ZSCAN31Q96LW9 406 aaPredicted RBP30.5■■■□□ 2.47
SDCCAG3-201ENST00000298537 GZF1Q9H116 711 aaPredicted RBP30.5■■■□□ 2.47
SDCCAG3-201ENST00000298537 ABCF2Q9UG63 623 aa30.5■■■□□ 2.47
SDCCAG3-201ENST00000298537 MAP3K12Q12852 859 aa30.49■■■□□ 2.47
SDCCAG3-201ENST00000298537 FOXD4L6Q3SYB3 417 aaPredicted RBP30.49■■■□□ 2.47
SDCCAG3-201ENST00000298537 FOXD4L3Q6VB84 417 aaPredicted RBP30.49■■■□□ 2.47
SDCCAG3-201ENST00000298537 DOCK2Q92608 1830 aa30.49■■■□□ 2.47
SDCCAG3-201ENST00000298537 ADGRA1Q86SQ6 560 aa30.48■■■□□ 2.47
SDCCAG3-201ENST00000298537 ALDH8A1Q9H2A2 487 aaPredicted RBP30.48■■■□□ 2.47
SDCCAG3-201ENST00000298537 ARMT1Q9H993 441 aa30.48■■■□□ 2.47
SDCCAG3-201ENST00000298537 SH2B1Q9NRF2 756 aaPredicted RBP30.48■■■□□ 2.47
SDCCAG3-201ENST00000298537 BRF1Q92994 677 aa30.48■■■□□ 2.47
SDCCAG3-201ENST00000298537 STRBPQ96SI9 672 aaKnown RBP30.48■■■□□ 2.47
SDCCAG3-201ENST00000298537 NBPF3Q9H094 633 aa30.48■■■□□ 2.47
SDCCAG3-201ENST00000298537 SMC3Q9UQE7 1217 aa30.48■■■□□ 2.47
SDCCAG3-201ENST00000298537 MBD4O95243 580 aa30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 GJB2P29033 226 aa30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 VPS37DQ86XT2 251 aa30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 LRP2BPQ9P2M1 347 aa30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 POLRMTO00411 1230 aaKnown RBP30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 POTEAQ6S8J7 498 aa30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 COL23A1Q86Y22 540 aaPredicted RBP30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 MIGA1Q8NAN2 632 aa30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 AIDAQ96BJ3 306 aa30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 GPR101Q96P66 508 aaPredicted RBP30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 GPHNQ9NQX3 736 aaPredicted RBP30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 JAG2Q9Y219 1238 aa30.47■■■□□ 2.47
SDCCAG3-201ENST00000298537 PLSCR1O15162 318 aa30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 PRKAB2O43741 272 aa30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 APPP05067 770 aa30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 EXOSC10Q01780 885 aaKnown RBP30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 GRAPQ13588 217 aa30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 CAVIN4Q5BKX8 364 aa30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 DHX32Q7L7V1 743 aaKnown RBP30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 GRAPLQ8TC17 118 aaPredicted RBP30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 FBXO33Q7Z6M2 555 aa30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 AKT1S1Q96B36 256 aa30.46■■■□□ 2.47
SDCCAG3-201ENST00000298537 ANKRD1Q15327 319 aa30.45■■■□□ 2.47
SDCCAG3-201ENST00000298537 IMMTQ16891 758 aaKnown RBP30.45■■■□□ 2.47
SDCCAG3-201ENST00000298537 LCORLQ8N3X6 602 aa30.45■■■□□ 2.46
SDCCAG3-201ENST00000298537 EPB41L4AQ9HCS5 686 aaPredicted RBP30.45■■■□□ 2.46
SDCCAG3-201ENST00000298537 SYT1P21579 422 aa30.44■■■□□ 2.46
SDCCAG3-201ENST00000298537 CTNNA3Q9UI47 895 aa30.44■■■□□ 2.46
SDCCAG3-201ENST00000298537 APOBRQ0VD83 1088 aa30.43■■■□□ 2.46
SDCCAG3-201ENST00000298537 ZNF384Q8TF68 577 aa30.43■■■□□ 2.46
SDCCAG3-201ENST00000298537 ANKRD2Q9GZV1 360 aa30.43■■■□□ 2.46
SDCCAG3-201ENST00000298537 GOLGB1Q14789 3259 aaKnown RBP30.43■■■□□ 2.46
SDCCAG3-201ENST00000298537 TBC1D10CQ8IV04 446 aa30.42■■■□□ 2.46
SDCCAG3-201ENST00000298537 INCENPQ9NQS7 918 aa30.42■■■□□ 2.46
SDCCAG3-201ENST00000298537 GNL3LQ9NVN8 582 aaKnown RBP30.42■■■□□ 2.46
SDCCAG3-201ENST00000298537 IRS2Q9Y4H2 1338 aa30.42■■■□□ 2.46
SDCCAG3-201ENST00000298537 ST5P78524 1137 aa30.42■■■□□ 2.46
SDCCAG3-201ENST00000298537 RAI14Q9P0K7 980 aa30.42■■■□□ 2.46
SDCCAG3-201ENST00000298537 ANKIB1Q9P2G1 1089 aa30.42■■■□□ 2.46
SDCCAG3-201ENST00000298537 ZNF213O14771 459 aa30.41■■■□□ 2.46
SDCCAG3-201ENST00000298537 FGD1P98174 961 aa30.41■■■□□ 2.46
SDCCAG3-201ENST00000298537 CRY2Q49AN0 593 aa30.41■■■□□ 2.46
SDCCAG3-201ENST00000298537 RPGRQ92834 1020 aaKnown RBP30.41■■■□□ 2.46
SDCCAG3-201ENST00000298537 HIBADHP31937 336 aaKnown RBP30.4■■■□□ 2.46
SDCCAG3-201ENST00000298537 CYP7A1P22680 504 aa30.4■■■□□ 2.46
SDCCAG3-201ENST00000298537 JAK2O60674 1132 aa30.39■■■□□ 2.46
SDCCAG3-201ENST00000298537 HMGB1P09429 215 aaKnown RBP30.39■■■□□ 2.46
SDCCAG3-201ENST00000298537 CHAF1AQ13111 956 aaPredicted RBP30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms