RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 ADAM21Q9UKJ8 722 aa15.62■□□□□ 0.09
RPUSD4-201ENST00000298317 ATP1A3P13637 1013 aa15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 LMOD1P29536 600 aaPredicted RBP15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 HOXC9P31274 260 aa15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 TNNT3P45378 269 aaPredicted RBP15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 PPP2R3AQ06190 1150 aa15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 C10orf67Q8IYJ2 551 aa15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 FMNL2Q96PY5 1086 aa15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 SEC62Q99442 399 aaKnown RBP15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 CWF19L2Q2TBE0 894 aaKnown RBP15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 DHX32Q7L7V1 743 aaKnown RBP15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 PARD6BQ9BYG5 372 aa15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 BICC1Q9H694 974 aaKnown RBP15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 CARMIL3Q8ND23 1372 aa15.61■□□□□ 0.09
RPUSD4-201ENST00000298317 H3BQF6 201 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 BIN1O00499 593 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 MAP2K7O14733 419 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 ARHGAP6O43182 974 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 APOBRQ0VD83 1088 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 VSTM4Q8IW00 320 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 KCNG4Q8TDN1 519 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 ZNF622Q969S3 477 aaKnown RBP eCLIP15.6■□□□□ 0.094e-6■□□□□ 8.2
RPUSD4-201ENST00000298317 DBF4Q9UBU7 674 aaPredicted RBP15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 PPP2R2CQ9Y2T4 447 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 LOC102724159A0A0B4J2E5 919 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 GOLGA6L9A6NEM1 432 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 CBFA2T2O43439 604 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 YEATS4O95619 227 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 ACTN2P35609 894 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 GUCY1B3Q02153 619 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 PWP2Q15269 919 aaKnown RBP15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 KSR2Q6VAB6 950 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 CCDC129Q6ZRS4 1044 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 DPF2Q92785 391 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 WDR24Q96S15 920 aa15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 RRP15Q9Y3B9 282 aaKnown RBP15.6■□□□□ 0.09
RPUSD4-201ENST00000298317 CCDC151A5D8V7 595 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 GRM8O00222 908 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 KCNQ3O43525 872 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 DHX16O60231 1041 aaKnown RBP15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 LMAN1P49257 510 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 UBASH3AP57075 661 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 JAKMIP3Q5VZ66 844 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 KIFC2Q96AC6 838 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 POLR3EQ9NVU0 708 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 PLEKHG2Q9H7P9 1386 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 ZNF202O95125 648 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 ATP5JP18859 108 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 GYS2P54840 703 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 CCT2P78371 535 aaKnown RBP15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 EXOSC10Q01780 885 aaKnown RBP15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 LONRF2Q1L5Z9 754 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 CTR9Q6PD62 1173 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 CLIC4Q9Y696 253 aa15.59■□□□□ 0.09
RPUSD4-201ENST00000298317 STK38Q15208 465 aa15.58■□□□□ 0.09
RPUSD4-201ENST00000298317 GOLGA1Q92805 767 aa15.58■□□□□ 0.09
RPUSD4-201ENST00000298317 NCOA5Q9HCD5 579 aaKnown RBP15.58■□□□□ 0.09
RPUSD4-201ENST00000298317 GNL2Q13823 731 aaKnown RBP15.58■□□□□ 0.08
RPUSD4-201ENST00000298317 MCMDC2Q4G0Z9 681 aa15.58■□□□□ 0.08
RPUSD4-201ENST00000298317 MARF1Q9Y4F3 1742 aaKnown RBP15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 FDPSP14324 419 aaKnown RBP15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 TXLNAP40222 546 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 GNG11P61952 73 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 MLECQ14165 292 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 BRD3Q15059 726 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 SF3A1Q15459 793 aaKnown RBP15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 CNPY4Q8N129 248 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 LINS1Q8NG48 757 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 TUBE1Q9UJT0 475 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 ADAMTS13Q76LX8 1427 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 SPTLC2O15270 562 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 TOP1P11387 765 aaKnown RBP15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 MYL5Q02045 173 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 GOLGA8FQ08AF8 430 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 GOLGA8DPQ0D2H9 430 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 LGR6Q9HBX8 967 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 DIP2BQ9P265 1576 aa15.57■□□□□ 0.08
RPUSD4-201ENST00000298317 MYO1BO43795 1136 aa15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 SERPINC1P01008 464 aa15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 CHGBP05060 677 aa15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 IVLP07476 585 aa15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 PDIA3P30101 505 aaKnown RBP15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 PROSER3Q2NL68 480 aa15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 CFAP100Q494V2 611 aa15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 FAM177A1Q8N128 213 aaPredicted RBP15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 MSL3Q8N5Y2 521 aaKnown RBP15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 ZNF274Q96GC6 653 aaPredicted RBP15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 SH3TC1Q8TE82 1336 aa15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 RPS6KA5O75582 802 aa15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 PFKFB1P16118 471 aa15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 HNRNPLLQ8WVV9 542 aaKnown RBP15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 DBNLQ9UJU6 430 aaKnown RBP15.56■□□□□ 0.08
RPUSD4-201ENST00000298317 TMEM232C9JQI7 657 aa15.55■□□□□ 0.08
RPUSD4-201ENST00000298317 CMA1P23946 247 aa15.55■□□□□ 0.08
RPUSD4-201ENST00000298317 GTF2A1P52655 376 aaPredicted RBP15.55■□□□□ 0.08
RPUSD4-201ENST00000298317 TBX2Q13207 712 aaPredicted RBP15.55■□□□□ 0.08
RPUSD4-201ENST00000298317 KLHDC4Q8TBB5 520 aa15.55■□□□□ 0.08
RPUSD4-201ENST00000298317 USP54Q70EL1 1684 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms