RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 TNRC6CQ9HCJ0 1690 aaKnown RBP16.19■□□□□ 0.18
CHMP4C-201ENST00000297265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.19■□□□□ 0.18
CHMP4C-201ENST00000297265 E7EWF7 191 aa16.19■□□□□ 0.18
CHMP4C-201ENST00000297265 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.19■□□□□ 0.18
CHMP4C-201ENST00000297265 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.19■□□□□ 0.18
CHMP4C-201ENST00000297265 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
CHMP4C-201ENST00000297265 IDH1O75874 414 aaKnown RBP16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 PDE6AP16499 860 aa16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 RPS8P62241 208 aaKnown RBP16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 AGXT2Q9BYV1 514 aa16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 LMBRD1Q9NUN5 540 aa16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 ADRA2BP18089 450 aa16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 UBE4AQ14139 1066 aa16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 ANKRD1Q15327 319 aa16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 SLC27A3Q5K4L6 730 aa16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 FOXD4L5Q5VV16 416 aaPredicted RBP16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 MCTP1Q6DN14 999 aa16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 ZSCAN25Q6NSZ9 544 aa16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 FOXD4L4Q8WXT5 416 aaPredicted RBP16.18■□□□□ 0.18
CHMP4C-201ENST00000297265 SYT1P21579 422 aa16.17■□□□□ 0.18
CHMP4C-201ENST00000297265 Q6ZUG5 572 aa16.17■□□□□ 0.18
CHMP4C-201ENST00000297265 DHX32Q7L7V1 743 aaKnown RBP16.17■□□□□ 0.18
CHMP4C-201ENST00000297265 GYS1P13807 737 aa16.16■□□□□ 0.18
CHMP4C-201ENST00000297265 GYG1P46976 350 aa16.16■□□□□ 0.18
CHMP4C-201ENST00000297265 GJB2P29033 226 aa16.16■□□□□ 0.18
CHMP4C-201ENST00000297265 FAM84BQ96KN1 310 aaPredicted RBP16.16■□□□□ 0.18
CHMP4C-201ENST00000297265 STRBPQ96SI9 672 aaKnown RBP16.16■□□□□ 0.18
CHMP4C-201ENST00000297265 LRRC2Q9BYS8 371 aa16.16■□□□□ 0.18
CHMP4C-201ENST00000297265 NBPF3Q9H094 633 aa16.16■□□□□ 0.18
CHMP4C-201ENST00000297265 SMC3Q9UQE7 1217 aa16.16■□□□□ 0.18
CHMP4C-201ENST00000297265 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
CHMP4C-201ENST00000297265 COL1A1P02452 1464 aaPredicted RBP16.15■□□□□ 0.18
CHMP4C-201ENST00000297265 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
CHMP4C-201ENST00000297265 SLC51AQ86UW1 340 aa16.15■□□□□ 0.18
CHMP4C-201ENST00000297265 KLRK1P26718 216 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 MAGEB6Q8N7X4 407 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 GZF1Q9H116 711 aaPredicted RBP16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 CTNNA3Q9UI47 895 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 IQSEC3Q9UPP2 1182 aaPredicted RBP16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 IRS2Q9Y4H2 1338 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 TCHHQ07283 1943 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 STX6O43752 255 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 HAND2P61296 217 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 RBM6P78332 1123 aaKnown RBP16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 TXNRD1Q16881 649 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 SKOR2Q2VWA4 1001 aaPredicted RBP16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 FBXO33Q7Z6M2 555 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 FBXL16Q8N461 479 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 NKX2-3Q8TAU0 364 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 BRF1Q92994 677 aa16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 WDR33Q9C0J8 1336 aaKnown RBP16.14■□□□□ 0.17
CHMP4C-201ENST00000297265 PTMSP20962 102 aa16.13■□□□□ 0.17
CHMP4C-201ENST00000297265 MAP3K12Q12852 859 aa16.13■□□□□ 0.17
CHMP4C-201ENST00000297265 IMMTQ16891 758 aaKnown RBP16.13■□□□□ 0.17
CHMP4C-201ENST00000297265 PRR5LQ6MZQ0 368 aa16.13■□□□□ 0.17
CHMP4C-201ENST00000297265 GOLGA6L22H0YM25 854 aa16.12■□□□□ 0.17
CHMP4C-201ENST00000297265 ZSCAN22P10073 491 aaPredicted RBP16.12■□□□□ 0.17
CHMP4C-201ENST00000297265 STK3Q13188 491 aa16.12■□□□□ 0.17
CHMP4C-201ENST00000297265 CHST3Q7LGC8 479 aa16.12■□□□□ 0.17
CHMP4C-201ENST00000297265 GTF3C6Q969F1 213 aa16.12■□□□□ 0.17
CHMP4C-201ENST00000297265 DENND2AQ9ULE3 1009 aa16.12■□□□□ 0.17
CHMP4C-201ENST00000297265 MTMR6Q9Y217 621 aa16.12■□□□□ 0.17
CHMP4C-201ENST00000297265 PRPF40AO75400 957 aaKnown RBP16.12■□□□□ 0.17
CHMP4C-201ENST00000297265 KLHL40Q2TBA0 621 aa16.12■□□□□ 0.17
CHMP4C-201ENST00000297265 MB21D2Q8IYB1 491 aaPredicted RBP16.12■□□□□ 0.17
CHMP4C-201ENST00000297265 CACNA1SQ13698 1873 aa16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 EVCP57679 992 aa16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 ANTXR2P58335 489 aa16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 SCRN1Q12765 414 aa16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 ALX1Q15699 326 aa16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 ZNF772Q68DY9 489 aaPredicted RBP16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 ADGRA1Q86SQ6 560 aa16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 TXNRD3Q86VQ6 643 aa16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 CNBD1Q8NA66 436 aa16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 ZNF384Q8TF68 577 aa16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 EPB41L4AQ9HCS5 686 aaPredicted RBP16.11■□□□□ 0.17
CHMP4C-201ENST00000297265 FSD2A1L4K1 749 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 PATL2C9JE40 543 aaKnown RBP16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 ZNF213O14771 459 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 CRY2Q49AN0 593 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 GPT2Q8TD30 523 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 AIDAQ96BJ3 306 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 GPHNQ9NQX3 736 aaPredicted RBP16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 GSG1L2A8MUP6 293 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 PLSCR1O15162 318 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 PFKFB2O60825 505 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 MBD4O95243 580 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 F13A1P00488 732 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 SERPINB2P05120 415 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 DDR1Q08345 913 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 APOBRQ0VD83 1088 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 CAVIN4Q5BKX8 364 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 ANKRD2Q9GZV1 360 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 ARMT1Q9H993 441 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 TACC3Q9Y6A5 838 aa16.1■□□□□ 0.17
CHMP4C-201ENST00000297265 ZMYM6O95789 1325 aa16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 PRKAB2O43741 272 aa16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 JAK2O60674 1132 aa16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 CTDNEP1O95476 244 aa16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 GRAPQ13588 217 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms