RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 CCDC66A2RUB6 948 aa22.29■■□□□ 1.16
TRA2A-201ENST00000297071 DHX16O60231 1041 aaKnown RBP22.29■■□□□ 1.16
TRA2A-201ENST00000297071 LRRFIP1Q32MZ4 808 aaKnown RBP22.29■■□□□ 1.16
TRA2A-201ENST00000297071 FCHSD1Q86WN1 690 aa22.29■■□□□ 1.16
TRA2A-201ENST00000297071 DNAJC2Q99543 621 aaKnown RBP22.29■■□□□ 1.16
TRA2A-201ENST00000297071 SDF4Q9BRK5 362 aa22.29■■□□□ 1.16
TRA2A-201ENST00000297071 PAG1Q9NWQ8 432 aa22.29■■□□□ 1.16
TRA2A-201ENST00000297071 NEDD4P46934 1319 aa22.29■■□□□ 1.16
TRA2A-201ENST00000297071 CEBPZQ03701 1054 aaKnown RBP22.28■■□□□ 1.16
TRA2A-201ENST00000297071 ZRSR1Q15695 479 aaKnown RBP22.28■■□□□ 1.16
TRA2A-201ENST00000297071 PPP1R13BQ96KQ4 1090 aa22.28■■□□□ 1.16
TRA2A-201ENST00000297071 HSPD1P10809 573 aaKnown RBP22.27■■□□□ 1.16
TRA2A-201ENST00000297071 SFPQP23246 707 aaKnown RBP eCLIP22.27■■□□□ 1.16
TRA2A-201ENST00000297071 ALS2Q96Q42 1657 aa22.27■■□□□ 1.16
TRA2A-201ENST00000297071 SNRPA1P09661 255 aaKnown RBP22.27■■□□□ 1.15
TRA2A-201ENST00000297071 FDPSP14324 419 aaKnown RBP22.27■■□□□ 1.15
TRA2A-201ENST00000297071 FTOQ9C0B1 505 aaKnown RBP eCLIP22.27■■□□□ 1.15
TRA2A-201ENST00000297071 ATG3Q9NT62 314 aa22.27■■□□□ 1.15
TRA2A-201ENST00000297071 ATP8B1O43520 1251 aa22.26■■□□□ 1.15
TRA2A-201ENST00000297071 CMA1P23946 247 aa22.26■■□□□ 1.15
TRA2A-201ENST00000297071 ELF2Q15723 593 aa22.26■■□□□ 1.15
TRA2A-201ENST00000297071 DDX46Q7L014 1031 aaKnown RBP22.26■■□□□ 1.15
TRA2A-201ENST00000297071 LRRC2Q9BYS8 371 aa22.26■■□□□ 1.15
TRA2A-201ENST00000297071 XPO4Q9C0E2 1151 aaKnown RBP22.26■■□□□ 1.15
TRA2A-201ENST00000297071 ABCC12Q96J65 1359 aa22.25■■□□□ 1.15
TRA2A-201ENST00000297071 FAM237AA0A1B0GTK4 181 aa22.25■■□□□ 1.15
TRA2A-201ENST00000297071 RNF113AO15541 343 aaKnown RBP22.25■■□□□ 1.15
TRA2A-201ENST00000297071 STK38Q15208 465 aa22.25■■□□□ 1.15
TRA2A-201ENST00000297071 ARMCX5Q6P1M9 558 aa22.25■■□□□ 1.15
TRA2A-201ENST00000297071 PLBD2Q8NHP8 589 aa22.25■■□□□ 1.15
TRA2A-201ENST00000297071 COL18A1P39060 1754 aa22.25■■□□□ 1.15
TRA2A-201ENST00000297071 H7C1W4 665 aa22.24■■□□□ 1.15
TRA2A-201ENST00000297071 SPTLC2O15270 562 aa22.24■■□□□ 1.15
TRA2A-201ENST00000297071 CBFA2T2O43439 604 aa22.24■■□□□ 1.15
TRA2A-201ENST00000297071 SLC3A2P08195 630 aaKnown RBP22.24■■□□□ 1.15
TRA2A-201ENST00000297071 TPM1P09493 284 aa22.24■■□□□ 1.15
TRA2A-201ENST00000297071 IL15P40933 162 aaPredicted RBP22.24■■□□□ 1.15
TRA2A-201ENST00000297071 NDUFA8P51970 172 aa22.24■■□□□ 1.15
TRA2A-201ENST00000297071 NCAPHQ15003 741 aa22.24■■□□□ 1.15
TRA2A-201ENST00000297071 FBXO18Q8NFZ0 1043 aa22.24■■□□□ 1.15
TRA2A-201ENST00000297071 TRMT1Q9NXH9 659 aaKnown RBP22.24■■□□□ 1.15
TRA2A-201ENST00000297071 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.24■■□□□ 1.152e-9■□□□□ 10.5
TRA2A-201ENST00000297071 CIAO1O76071 339 aa22.24■■□□□ 1.15
TRA2A-201ENST00000297071 ELOA2Q8IYF1 753 aaPredicted RBP22.24■■□□□ 1.15
TRA2A-201ENST00000297071 TUBE1Q9UJT0 475 aa22.24■■□□□ 1.15
TRA2A-201ENST00000297071 MAST3O60307 1309 aa22.23■■□□□ 1.15
TRA2A-201ENST00000297071 ZFYP08048 801 aaPredicted RBP22.23■■□□□ 1.15
TRA2A-201ENST00000297071 ETF1P62495 437 aaKnown RBP22.23■■□□□ 1.15
TRA2A-201ENST00000297071 CCT2P78371 535 aaKnown RBP22.23■■□□□ 1.15
TRA2A-201ENST00000297071 SF3A1Q15459 793 aaKnown RBP22.23■■□□□ 1.15
TRA2A-201ENST00000297071 DPCR1Q3MIW9 517 aa22.23■■□□□ 1.15
TRA2A-201ENST00000297071 MYSM1Q5VVJ2 828 aa22.23■■□□□ 1.15
TRA2A-201ENST00000297071 IFNKQ9P0W0 207 aa22.23■■□□□ 1.15
TRA2A-201ENST00000297071 ECM29Q5VYK3 1845 aa22.23■■□□□ 1.15
TRA2A-201ENST00000297071 UBR2Q8IWV8 1755 aa22.23■■□□□ 1.15
TRA2A-201ENST00000297071 ATG9AQ7Z3C6 839 aa22.22■■□□□ 1.15
TRA2A-201ENST00000297071 UBE3BQ7Z3V4 1068 aa22.22■■□□□ 1.15
TRA2A-201ENST00000297071 TMC6Q7Z403 805 aa22.22■■□□□ 1.15
TRA2A-201ENST00000297071 C8orf76Q96K31 380 aa22.22■■□□□ 1.15
TRA2A-201ENST00000297071 TMX1Q9H3N1 280 aa22.22■■□□□ 1.15
TRA2A-201ENST00000297071 A0A1B0GVL5 298 aa22.22■■□□□ 1.15
TRA2A-201ENST00000297071 MYL6BP14649 208 aa22.22■■□□□ 1.15
TRA2A-201ENST00000297071 PHKG2P15735 406 aa22.22■■□□□ 1.15
TRA2A-201ENST00000297071 FOXO4P98177 505 aa22.22■■□□□ 1.15
TRA2A-201ENST00000297071 FBXO3Q9UK99 471 aa22.22■■□□□ 1.15
TRA2A-201ENST00000297071 A0A087WZG4 1122 aa22.21■■□□□ 1.15
TRA2A-201ENST00000297071 ZNF202O95125 648 aa22.21■■□□□ 1.15
TRA2A-201ENST00000297071 ESCO1Q5FWF5 840 aa22.21■■□□□ 1.15
TRA2A-201ENST00000297071 AXDND1Q5T1B0 1012 aaPredicted RBP22.21■■□□□ 1.15
TRA2A-201ENST00000297071 FMNL2Q96PY5 1086 aa22.21■■□□□ 1.15
TRA2A-201ENST00000297071 GOLIM4O00461 696 aa22.2■■□□□ 1.14
TRA2A-201ENST00000297071 PPP6R2O75170 966 aa22.2■■□□□ 1.14
TRA2A-201ENST00000297071 NCOA5Q9HCD5 579 aaKnown RBP22.2■■□□□ 1.14
TRA2A-201ENST00000297071 ARGLU1Q9NWB6 273 aaPredicted RBP22.2■■□□□ 1.14
TRA2A-201ENST00000297071 ZNF446Q9NWS9 450 aa22.2■■□□□ 1.14
TRA2A-201ENST00000297071 MAP3K15Q6ZN16 1313 aa22.2■■□□□ 1.14
TRA2A-201ENST00000297071 SMC2O95347 1197 aa22.2■■□□□ 1.14
TRA2A-201ENST00000297071 FANCCQ00597 558 aa22.2■■□□□ 1.14
TRA2A-201ENST00000297071 ANO1Q5XXA6 986 aa22.2■■□□□ 1.14
TRA2A-201ENST00000297071 ZNF496Q96IT1 587 aaPredicted RBP22.2■■□□□ 1.14
TRA2A-201ENST00000297071 CLIC4Q9Y696 253 aa22.2■■□□□ 1.14
TRA2A-201ENST00000297071 SYT10Q6XYQ8 523 aa22.19■■□□□ 1.14
TRA2A-201ENST00000297071 IFNL2Q8IZJ0 200 aa22.19■■□□□ 1.14
TRA2A-201ENST00000297071 RAPGEF4Q8WZA2 1011 aa22.19■■□□□ 1.14
TRA2A-201ENST00000297071 HPSEQ9Y251 543 aa22.19■■□□□ 1.14
TRA2A-201ENST00000297071 GOLGA6L9A6NEM1 432 aa22.18■■□□□ 1.14
TRA2A-201ENST00000297071 ZRANB2O95218 330 aaKnown RBP eCLIP22.18■■□□□ 1.145e-6■■■□□ 15.5
TRA2A-201ENST00000297071 SLC39A14Q15043 492 aa22.18■■□□□ 1.14
TRA2A-201ENST00000297071 LMBR1LQ6UX01 489 aa22.18■■□□□ 1.14
TRA2A-201ENST00000297071 SYNE3Q6ZMZ3 975 aa22.18■■□□□ 1.14
TRA2A-201ENST00000297071 CHGBP05060 677 aa22.17■■□□□ 1.14
TRA2A-201ENST00000297071 IFIT1P09914 478 aaKnown RBP22.17■■□□□ 1.14
TRA2A-201ENST00000297071 TATP17735 454 aaPredicted RBP22.17■■□□□ 1.14
TRA2A-201ENST00000297071 SLC39A6Q13433 755 aa22.17■■□□□ 1.14
TRA2A-201ENST00000297071 IMMTQ16891 758 aaKnown RBP22.17■■□□□ 1.14
TRA2A-201ENST00000297071 MB21D2Q8IYB1 491 aaPredicted RBP22.17■■□□□ 1.14
TRA2A-201ENST00000297071 JMYQ8N9B5 988 aa22.17■■□□□ 1.14
TRA2A-201ENST00000297071 DCAF5Q96JK2 942 aa22.17■■□□□ 1.14
TRA2A-201ENST00000297071 CALCOCO1Q9P1Z2 691 aa22.17■■□□□ 1.14
TRA2A-201ENST00000297071 DNAI1Q9UI46 699 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms