RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 MKRN1Q9UHC7 482 aaKnown RBP12.48□□□□□ -0.41
PBRM1-201ENST00000296302 ZFYVE9O95405 1425 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 CALM1P0DP23 149 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 CALM2P0DP24 149 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 CALM3P0DP25 149 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 CALML3P27482 149 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 FANCCQ00597 558 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 SELENOSQ9BQE4 189 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 COL17A1Q9UMD9 1497 aaPredicted RBP12.47□□□□□ -0.41
PBRM1-201ENST00000296302 NEK11Q8NG66 645 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 IFT81Q8WYA0 676 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 POLKQ9UBT6 870 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 INPP5BP32019 993 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 ACTN2P35609 894 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 SYCP3Q8IZU3 236 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 NDUFAB1O14561 156 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 IGSF22Q8N9C0 903 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 LEO1Q8WVC0 666 aaPredicted RBP12.47□□□□□ -0.41
PBRM1-201ENST00000296302 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
PBRM1-201ENST00000296302 CRNKL1Q9BZJ0 848 aaKnown RBP12.47□□□□□ -0.41
PBRM1-201ENST00000296302 SNX14Q9Y5W7 946 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 BLMP54132 1417 aaPredicted RBP12.47□□□□□ -0.41
PBRM1-201ENST00000296302 BAG3O95817 575 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 ATP2B3Q16720 1220 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 TCOF1Q13428 1488 aaKnown RBP12.47□□□□□ -0.41
PBRM1-201ENST00000296302 BIVM-ERCC5R4GMW8 1640 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 ACEP12821 1306 aa12.47□□□□□ -0.41
PBRM1-201ENST00000296302 RTL9Q8NET4 1388 aa12.46□□□□□ -0.41
PBRM1-201ENST00000296302 MTRF1LQ9UGC7 380 aaKnown RBP12.46□□□□□ -0.41
PBRM1-201ENST00000296302 PA2G4Q9UQ80 394 aaKnown RBP12.46□□□□□ -0.41
PBRM1-201ENST00000296302 GADD45BO75293 160 aaPredicted RBP12.46□□□□□ -0.41
PBRM1-201ENST00000296302 PPP1R2P41236 205 aa12.46□□□□□ -0.41
PBRM1-201ENST00000296302 PPP1R14CQ8TAE6 165 aa12.46□□□□□ -0.41
PBRM1-201ENST00000296302 KRT2P35908 639 aa12.46□□□□□ -0.41
PBRM1-201ENST00000296302 LACTBP83111 547 aaPredicted RBP12.46□□□□□ -0.41
PBRM1-201ENST00000296302 IQCGQ9H095 443 aaKnown RBP12.46□□□□□ -0.41
PBRM1-201ENST00000296302 MSH6P52701 1360 aa12.46□□□□□ -0.42
PBRM1-201ENST00000296302 GOLGA6CA6NDK9 693 aa12.46□□□□□ -0.42
PBRM1-201ENST00000296302 GOLGA6DP0CG33 693 aa12.46□□□□□ -0.42
PBRM1-201ENST00000296302 KRT13P13646 458 aa12.46□□□□□ -0.42
PBRM1-201ENST00000296302 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.42
PBRM1-201ENST00000296302 CYP26C1Q6V0L0 522 aa12.46□□□□□ -0.42
PBRM1-201ENST00000296302 XAGE3Q8WTP9 111 aa12.46□□□□□ -0.42
PBRM1-201ENST00000296302 GOLGA6AQ9NYA3 693 aa12.46□□□□□ -0.42
PBRM1-201ENST00000296302 ATP2A1O14983 1001 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 OAS2P29728 719 aaKnown RBP12.45□□□□□ -0.42
PBRM1-201ENST00000296302 PAIP2Q9BPZ3 127 aaKnown RBP12.45□□□□□ -0.42
PBRM1-201ENST00000296302 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 SGSM2O43147 1006 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 ARHGAP25P42331 645 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 SLC9C2Q5TAH2 1124 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 CCDC50Q8IVM0 306 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 VAT1LQ9HCJ6 419 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 SLC4A4Q9Y6R1 1079 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 CPA1P15085 419 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
PBRM1-201ENST00000296302 SETDB1Q15047 1291 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 ANO1Q5XXA6 986 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 GNAT2P19087 354 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 FBLN1P23142 703 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 GPTP24298 496 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 NLRP12P59046 1061 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 RILPL1Q5EBL4 403 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 MLKLQ8NB16 471 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 HELLSQ9NRZ9 838 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 POGZQ7Z3K3 1410 aa12.45□□□□□ -0.42
PBRM1-201ENST00000296302 USP37Q86T82 979 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 OTUD7AQ8TE49 926 aaPredicted RBP12.44□□□□□ -0.42
PBRM1-201ENST00000296302 SMC6Q96SB8 1091 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 ANKIB1Q9P2G1 1089 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 AMOTL2Q9Y2J4 779 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 CEP83Q9Y592 693 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 NAA25Q14CX7 972 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 GRIPAP1Q4V328 841 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 CCDC174Q6PII3 467 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 COPS6Q7L5N1 327 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 GPR161Q8N6U8 529 aaKnown RBP12.44□□□□□ -0.42
PBRM1-201ENST00000296302 IFT74Q96LB3 600 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 SLC27A2O14975 620 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 ZBTB16Q05516 673 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 TMTC1Q8IUR5 882 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 UHRF1BP1Q6BDS2 1440 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 MXRA7P84157 204 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 STIM2Q9P246 746 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 SWAP70Q9UH65 585 aa12.44□□□□□ -0.42
PBRM1-201ENST00000296302 BRD3Q15059 726 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 CCDC26Q8TAB7 109 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 JARID2Q92833 1246 aaPredicted RBP12.43□□□□□ -0.42
PBRM1-201ENST00000296302 KCNH3Q9ULD8 1083 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 MAP3K9P80192 1104 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 NAA16Q6N069 864 aaPredicted RBP12.43□□□□□ -0.42
PBRM1-201ENST00000296302 SREK1Q8WXA9 508 aaKnown RBP12.43□□□□□ -0.42
PBRM1-201ENST00000296302 DUOX2Q9NRD8 1548 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 TLDC2A0PJX2 215 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 CYP7A1P22680 504 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 C8orf74Q6P047 294 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 CHST3Q7LGC8 479 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 FMNL3Q8IVF7 1028 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 FERMT2Q96AC1 680 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms