RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ERCC6LQ2NKX8 1250 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 KIF2CQ99661 725 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 ZNF335Q9H4Z2 1342 aaPredicted RBP15.37■□□□□ 0.05
HPS3-201ENST00000296051 MBD5Q9P267 1494 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 SPTLC2O15270 562 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 STX17P56962 302 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 GSTO1P78417 241 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 SLC9C2Q5TAH2 1124 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 MFSD6Q6ZSS7 791 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 CARD6Q9BX69 1037 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 BCS1LQ9Y276 419 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 SLC27A2O14975 620 aa15.37■□□□□ 0.05
HPS3-201ENST00000296051 IL15P40933 162 aaPredicted RBP15.36■□□□□ 0.05
HPS3-201ENST00000296051 IARSP41252 1262 aaKnown RBP15.36■□□□□ 0.05
HPS3-201ENST00000296051 LARGE2Q8N3Y3 721 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 CCDC191Q8NCU4 936 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 TRPC5Q9UL62 973 aaPredicted RBP15.36■□□□□ 0.05
HPS3-201ENST00000296051 CCDC194A0A1B0GVG4 234 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 GOLGA8AA7E2F4 631 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 CAPN2P17655 700 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 NLRP5P59047 1200 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 NAA30Q147X3 362 aaPredicted RBP15.36■□□□□ 0.05
HPS3-201ENST00000296051 SLC26A6Q9BXS9 759 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 KAT14Q9H8E8 782 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 RHOXF2BP0C7M4 288 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 RXRBP28702 533 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 EVCP57679 992 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 ERO1AQ96HE7 468 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 RHOXF2Q9BQY4 288 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 CLSTN2Q9H4D0 955 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 ARHGEF10O15013 1369 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 SH3TC1Q8TE82 1336 aa15.36■□□□□ 0.05
HPS3-201ENST00000296051 H0YIN7 160 aa15.35■□□□□ 0.05
HPS3-201ENST00000296051 TMEM67Q5HYA8 995 aa15.35■□□□□ 0.05
HPS3-201ENST00000296051 SRRTQ9BXP5 876 aaKnown RBP15.35■□□□□ 0.05
HPS3-201ENST00000296051 MCMDC2Q4G0Z9 681 aa15.35■□□□□ 0.05
HPS3-201ENST00000296051 ZDHHC9Q9Y397 364 aa15.35■□□□□ 0.05
HPS3-201ENST00000296051 USP44Q9H0E7 712 aa15.35■□□□□ 0.05
HPS3-201ENST00000296051 SAMM50Q9Y512 469 aa15.35■□□□□ 0.05
HPS3-201ENST00000296051 PLS1Q14651 629 aa15.35■□□□□ 0.05
HPS3-201ENST00000296051 ALG1Q9BT22 464 aa15.35■□□□□ 0.05
HPS3-201ENST00000296051 UBA5Q9GZZ9 404 aa15.35■□□□□ 0.05
HPS3-201ENST00000296051 MAP3K5Q99683 1374 aa15.35■□□□□ 0.05
HPS3-201ENST00000296051 VPS18Q9P253 973 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 ABCC1P33527 1531 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 UFL1O94874 794 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 DDX21Q9NR30 783 aaKnown RBP eCLIP15.34■□□□□ 0.05
HPS3-201ENST00000296051 TPCN1Q9ULQ1 816 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 SLC4A4Q9Y6R1 1079 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 TTC41PQ6P2S7 1318 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 METAP2P50579 478 aaKnown RBP eCLIP15.34■□□□□ 0.05
HPS3-201ENST00000296051 PRKG1Q13976 671 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 CCDC148Q8NFR7 591 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 FAM107BQ9H098 131 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 BICC1Q9H694 974 aaKnown RBP15.34■□□□□ 0.05
HPS3-201ENST00000296051 BIN2Q9UBW5 565 aaPredicted RBP15.34■□□□□ 0.05
HPS3-201ENST00000296051 ERVK-7P63135 1459 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 PLA2R1Q13018 1463 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 TRIM37O94972 964 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 MIGA1Q8NAN2 632 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 GBP3Q9H0R5 595 aa15.34■□□□□ 0.05
HPS3-201ENST00000296051 TSPY3P0CV98 308 aa15.33■□□□□ 0.05
HPS3-201ENST00000296051 TSPY8P0CW00 308 aa15.33■□□□□ 0.05
HPS3-201ENST00000296051 RPS6KB1P23443 525 aa15.33■□□□□ 0.05
HPS3-201ENST00000296051 KIAA1524Q8TCG1 905 aa15.33■□□□□ 0.05
HPS3-201ENST00000296051 KCNG4Q8TDN1 519 aa15.33■□□□□ 0.05
HPS3-201ENST00000296051 PPP4R3AQ6IN85 833 aa15.33■□□□□ 0.04
HPS3-201ENST00000296051 PUS7Q96PZ0 661 aaKnown RBP15.33■□□□□ 0.04
HPS3-201ENST00000296051 SBNO2Q9Y2G9 1366 aa15.33■□□□□ 0.04
HPS3-201ENST00000296051 N4BP3O15049 544 aa15.33■□□□□ 0.04
HPS3-201ENST00000296051 PTPN21Q16825 1174 aa15.33■□□□□ 0.04
HPS3-201ENST00000296051 CCDC87Q9NVE4 849 aa15.33■□□□□ 0.04
HPS3-201ENST00000296051 TIMM10P62072 90 aa15.32■□□□□ 0.04
HPS3-201ENST00000296051 RBM17Q96I25 401 aaKnown RBP15.32■□□□□ 0.04
HPS3-201ENST00000296051 LARGE1O95461 756 aa15.32■□□□□ 0.04
HPS3-201ENST00000296051 DMTNQ08495 405 aa15.32■□□□□ 0.04
HPS3-201ENST00000296051 TFCP2Q12800 502 aa15.32■□□□□ 0.04
HPS3-201ENST00000296051 SPECC1Q5M775 1068 aa15.32■□□□□ 0.04
HPS3-201ENST00000296051 ZNF496Q96IT1 587 aaPredicted RBP15.32■□□□□ 0.04
HPS3-201ENST00000296051 FAM160A1Q05DH4 1040 aa15.32■□□□□ 0.04
HPS3-201ENST00000296051 CACTINQ8WUQ7 758 aaKnown RBP15.32■□□□□ 0.04
HPS3-201ENST00000296051 KRBA2Q6ZNG9 492 aa15.32■□□□□ 0.04
HPS3-201ENST00000296051 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
HPS3-201ENST00000296051 DRC1Q96MC2 740 aa15.32■□□□□ 0.04
HPS3-201ENST00000296051 MCM9Q9NXL9 1143 aa15.32■□□□□ 0.04
HPS3-201ENST00000296051 KIF5BP33176 963 aa15.31■□□□□ 0.04
HPS3-201ENST00000296051 RABEP2Q9H5N1 569 aa15.31■□□□□ 0.04
HPS3-201ENST00000296051 DHX32Q7L7V1 743 aaKnown RBP15.31■□□□□ 0.04
HPS3-201ENST00000296051 SEPT11Q9NVA2 429 aaKnown RBP15.31■□□□□ 0.04
HPS3-201ENST00000296051 IBTKQ9P2D0 1353 aaPredicted RBP15.31■□□□□ 0.04
HPS3-201ENST00000296051 CDR1P51861 262 aa15.31■□□□□ 0.04
HPS3-201ENST00000296051 CTR9Q6PD62 1173 aa15.31■□□□□ 0.04
HPS3-201ENST00000296051 LDHBP07195 334 aaKnown RBP15.31■□□□□ 0.04
HPS3-201ENST00000296051 DNAJC21Q5F1R6 531 aaKnown RBP15.31■□□□□ 0.04
HPS3-201ENST00000296051 NCOA7Q8NI08 942 aa15.31■□□□□ 0.04
HPS3-201ENST00000296051 PRC1O43663 620 aa15.3■□□□□ 0.04
HPS3-201ENST00000296051 EIF6P56537 245 aaKnown RBP15.3■□□□□ 0.04
HPS3-201ENST00000296051 DPP8Q6V1X1 898 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms