RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ZSCAN25Q6NSZ9 544 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 PI16Q6UXB8 463 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 SPATA5Q8NB90 893 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 FLAD1Q8NFF5 587 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 APPBP2Q92624 585 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 OSBP2Q969R2 916 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 ANKRD2Q9GZV1 360 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 COL1A1P02452 1464 aaPredicted RBP10.91□□□□□ -0.66
PDPN-201ENST00000294489 CPA1P15085 419 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 RASGRF1Q13972 1273 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 BLOC1S2Q6QNY1 142 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 CCDC129Q6ZRS4 1044 aa10.91□□□□□ -0.66
PDPN-201ENST00000294489 SH2B1Q9NRF2 756 aaPredicted RBP10.91□□□□□ -0.66
PDPN-201ENST00000294489 SERPINB2P05120 415 aa10.9□□□□□ -0.66
PDPN-201ENST00000294489 HOXA10P31260 410 aaPredicted RBP10.9□□□□□ -0.66
PDPN-201ENST00000294489 GRAPQ13588 217 aa10.9□□□□□ -0.66
PDPN-201ENST00000294489 ANKRD1Q15327 319 aa10.9□□□□□ -0.66
PDPN-201ENST00000294489 FBXO33Q7Z6M2 555 aa10.9□□□□□ -0.66
PDPN-201ENST00000294489 GRAPLQ8TC17 118 aaPredicted RBP10.9□□□□□ -0.66
PDPN-201ENST00000294489 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDPN-201ENST00000294489 GZF1Q9H116 711 aaPredicted RBP10.9□□□□□ -0.66
PDPN-201ENST00000294489 PODXL2Q9NZ53 605 aa10.9□□□□□ -0.66
PDPN-201ENST00000294489 TIAM2Q8IVF5 1701 aa10.9□□□□□ -0.66
PDPN-201ENST00000294489 SLFNL1Q499Z3 407 aa10.9□□□□□ -0.66
PDPN-201ENST00000294489 MCTP1Q6DN14 999 aa10.9□□□□□ -0.66
PDPN-201ENST00000294489 C15orf52Q6ZUT6 534 aaKnown RBP10.9□□□□□ -0.66
PDPN-201ENST00000294489 RTN4Q9NQC3 1192 aaKnown RBP10.9□□□□□ -0.66
PDPN-201ENST00000294489 DUOX1Q9NRD9 1551 aa10.9□□□□□ -0.67
PDPN-201ENST00000294489 SNAP23O00161 211 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 HSPD1P10809 573 aaKnown RBP10.89□□□□□ -0.67
PDPN-201ENST00000294489 COL23A1Q86Y22 540 aaPredicted RBP10.89□□□□□ -0.67
PDPN-201ENST00000294489 ZDHHC9Q9Y397 364 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 CCDC88AQ3V6T2 1871 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 SEMA3EO15041 775 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 BRD1O95696 1058 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 BCAMP50895 628 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 CHD4Q14839 1912 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 PNPLA7Q6ZV29 1317 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 ST5P78524 1137 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 CAMKK2Q96RR4 588 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 SMC3Q9UQE7 1217 aa10.89□□□□□ -0.67
PDPN-201ENST00000294489 ZMYM6O95789 1325 aa10.88□□□□□ -0.67
PDPN-201ENST00000294489 WDR33Q9C0J8 1336 aaKnown RBP10.88□□□□□ -0.67
PDPN-201ENST00000294489 RPS6KB1P23443 525 aa10.88□□□□□ -0.67
PDPN-201ENST00000294489 FAM84BQ96KN1 310 aaPredicted RBP10.88□□□□□ -0.67
PDPN-201ENST00000294489 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
PDPN-201ENST00000294489 TAF6LQ9Y6J9 622 aa10.88□□□□□ -0.67
PDPN-201ENST00000294489 IGSF3O75054 1194 aa10.88□□□□□ -0.67
PDPN-201ENST00000294489 CYP21A2P08686 494 aa10.88□□□□□ -0.67
PDPN-201ENST00000294489 PDE6AP16499 860 aa10.88□□□□□ -0.67
PDPN-201ENST00000294489 L1TD1Q5T7N2 865 aaKnown RBP10.88□□□□□ -0.67
PDPN-201ENST00000294489 NLGN1Q8N2Q7 840 aa10.88□□□□□ -0.67
PDPN-201ENST00000294489 CRAMP1Q96RY5 1269 aa10.88□□□□□ -0.67
PDPN-201ENST00000294489 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
PDPN-201ENST00000294489 NEK1Q96PY6 1258 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 DDX49Q9Y6V7 483 aaKnown RBP10.87□□□□□ -0.67
PDPN-201ENST00000294489 WTIPA6NIX2 430 aaPredicted RBP10.87□□□□□ -0.67
PDPN-201ENST00000294489 FOXD4L5Q5VV16 416 aaPredicted RBP10.87□□□□□ -0.67
PDPN-201ENST00000294489 TMED8Q6PL24 325 aaPredicted RBP10.87□□□□□ -0.67
PDPN-201ENST00000294489 CCDC24Q8N4L8 307 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 FOXD4L4Q8WXT5 416 aaPredicted RBP10.87□□□□□ -0.67
PDPN-201ENST00000294489 TFCP2L1Q9NZI6 479 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 DLEC1Q9Y238 1755 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 ALX1Q15699 326 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 WASHC4Q2M389 1173 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 KLHL40Q2TBA0 621 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 CCDC83Q8IWF9 413 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 FBXL16Q8N461 479 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 WWC3Q9ULE0 1092 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 LEMD3Q9Y2U8 911 aa10.87□□□□□ -0.67
PDPN-201ENST00000294489 GOLGA6L3A6NEY3 463 aa10.86□□□□□ -0.67
PDPN-201ENST00000294489 HMGB1P09429 215 aaKnown RBP10.86□□□□□ -0.67
PDPN-201ENST00000294489 SLC9C2Q5TAH2 1124 aa10.86□□□□□ -0.67
PDPN-201ENST00000294489 RBM17Q96I25 401 aaKnown RBP10.86□□□□□ -0.67
PDPN-201ENST00000294489 GNL3LQ9NVN8 582 aaKnown RBP10.86□□□□□ -0.67
PDPN-201ENST00000294489 ZNF532Q9HCE3 1301 aa10.86□□□□□ -0.67
PDPN-201ENST00000294489 COL9A3Q14050 684 aaPredicted RBP10.86□□□□□ -0.67
PDPN-201ENST00000294489 ME3Q16798 604 aa10.86□□□□□ -0.67
PDPN-201ENST00000294489 STOX1Q6ZVD7 989 aa10.86□□□□□ -0.67
PDPN-201ENST00000294489 DENND2AQ9ULE3 1009 aa10.86□□□□□ -0.67
PDPN-201ENST00000294489 GPAA1O43292 621 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 BBOX1O75936 387 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 LARGE1O95461 756 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 GYG1P46976 350 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 MAP3K12Q12852 859 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 CAVIN4Q5BKX8 364 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 TMC4Q7Z404 712 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 BRIP1Q9BX63 1249 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 AGXT2Q9BYV1 514 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 CTNNA3Q9UI47 895 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 TPCN1Q9ULQ1 816 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 PDIA4P13667 645 aaKnown RBP10.85□□□□□ -0.67
PDPN-201ENST00000294489 EXOSC10Q01780 885 aaKnown RBP10.85□□□□□ -0.67
PDPN-201ENST00000294489 STRBPQ96SI9 672 aaKnown RBP10.85□□□□□ -0.67
PDPN-201ENST00000294489 LMBRD1Q9NUN5 540 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 ISY1Q9ULR0 285 aaKnown RBP10.85□□□□□ -0.67
PDPN-201ENST00000294489 XDHP47989 1333 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 SALL1Q9NSC2 1324 aa10.85□□□□□ -0.67
PDPN-201ENST00000294489 ZNF646O15015 1829 aaPredicted RBP10.85□□□□□ -0.67
PDPN-201ENST00000294489 PRPF40AO75400 957 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms