RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 USP28Q96RU2 1077 aa18.55■□□□□ 0.56
NCKIPSD-201ENST00000294129 LLPHQ9BRT6 129 aaKnown RBP18.55■□□□□ 0.56
NCKIPSD-201ENST00000294129 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.55■□□□□ 0.565e-6■■■■■ 34.6
NCKIPSD-201ENST00000294129 ZSCAN16Q9H4T2 348 aaPredicted RBP18.55■□□□□ 0.56
NCKIPSD-201ENST00000294129 CFAP45Q9UL16 551 aa18.55■□□□□ 0.56
NCKIPSD-201ENST00000294129 MRVI1Q9Y6F6 885 aa18.55■□□□□ 0.56
NCKIPSD-201ENST00000294129 BCL9O00512 1426 aa18.55■□□□□ 0.56
NCKIPSD-201ENST00000294129 ZNF500O60304 480 aaPredicted RBP18.55■□□□□ 0.56
NCKIPSD-201ENST00000294129 POLR3DP05423 398 aaPredicted RBP18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 CCDC102BQ68D86 513 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 NUTM2BA6NNL0 878 aaPredicted RBP18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 NUTM2EB1AL46 878 aaPredicted RBP18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 PDE8AO60658 829 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 PDE8BO95263 885 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 NUTM2AQ8IVF1 878 aaPredicted RBP18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 SEC31BQ9NQW1 1179 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 WWC3Q9ULE0 1092 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 KIF3AQ9Y496 699 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 CPLX1O14810 134 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 MCM5P33992 734 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 CCDC144CPQ8IYA2 1237 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 NKX2-3Q8TAU0 364 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 ERCC4Q92889 916 aaPredicted RBP18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 INCENPQ9NQS7 918 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 FBXO3Q9UK99 471 aa18.54■□□□□ 0.56
NCKIPSD-201ENST00000294129 ME1P48163 572 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 DNAJC25Q9H1X3 360 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 CDHR2Q9BYE9 1310 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 ZNF532Q9HCE3 1301 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 ATP6V1AP38606 617 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 KIAA2012Q0VF49 1180 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 SASS6Q6UVJ0 657 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 NCOA7Q8NI08 942 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 AGXT2Q9BYV1 514 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 CLSTN2Q9H4D0 955 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 DDX19AQ9NUU7 478 aaKnown RBP18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 CARMIL3Q8ND23 1372 aa18.53■□□□□ 0.56
NCKIPSD-201ENST00000294129 FDPSP14324 419 aaKnown RBP18.52■□□□□ 0.56
NCKIPSD-201ENST00000294129 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.56
NCKIPSD-201ENST00000294129 FAM200AQ8TCP9 573 aa18.52■□□□□ 0.56
NCKIPSD-201ENST00000294129 ZNF274Q96GC6 653 aaPredicted RBP18.52■□□□□ 0.56
NCKIPSD-201ENST00000294129 TPM2P07951 284 aa18.52■□□□□ 0.56
NCKIPSD-201ENST00000294129 ADD2P35612 726 aa18.52■□□□□ 0.56
NCKIPSD-201ENST00000294129 ANTXR2P58335 489 aa18.52■□□□□ 0.56
NCKIPSD-201ENST00000294129 SUSD4Q5VX71 490 aa18.52■□□□□ 0.56
NCKIPSD-201ENST00000294129 MPHOSPH8Q99549 860 aa18.52■□□□□ 0.56
NCKIPSD-201ENST00000294129 IQSEC3Q9UPP2 1182 aaPredicted RBP18.52■□□□□ 0.56
NCKIPSD-201ENST00000294129 MYO5AQ9Y4I1 1855 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-201ENST00000294129 ADD1P35611 737 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-201ENST00000294129 TRDNQ13061 729 aa18.51■□□□□ 0.55
NCKIPSD-201ENST00000294129 NAA16Q6N069 864 aaPredicted RBP18.51■□□□□ 0.55
NCKIPSD-201ENST00000294129 CBX8Q9HC52 389 aa18.51■□□□□ 0.55
NCKIPSD-201ENST00000294129 ORC3Q9UBD5 711 aaPredicted RBP18.51■□□□□ 0.55
NCKIPSD-201ENST00000294129 TBC1D10CQ8IV04 446 aa18.51■□□□□ 0.55
NCKIPSD-201ENST00000294129 MB21D2Q8IYB1 491 aaPredicted RBP18.51■□□□□ 0.55
NCKIPSD-201ENST00000294129 VGLL2Q8N8G2 317 aa18.51■□□□□ 0.55
NCKIPSD-201ENST00000294129 B4E1Z4 1266 aa18.5■□□□□ 0.55
NCKIPSD-201ENST00000294129 DDB1Q16531 1140 aa18.5■□□□□ 0.55
NCKIPSD-201ENST00000294129 DRC7Q8IY82 874 aa18.5■□□□□ 0.55
NCKIPSD-201ENST00000294129 C8orf76Q96K31 380 aa18.5■□□□□ 0.55
NCKIPSD-201ENST00000294129 GOLPH3LQ9H4A5 285 aa18.5■□□□□ 0.55
NCKIPSD-201ENST00000294129 PDE6AP16499 860 aa18.5■□□□□ 0.55
NCKIPSD-201ENST00000294129 IL6STP40189 918 aaPredicted RBP18.5■□□□□ 0.55
NCKIPSD-201ENST00000294129 KCNQ4P56696 695 aa18.5■□□□□ 0.55
NCKIPSD-201ENST00000294129 ILDR1Q86SU0 546 aaPredicted RBP18.5■□□□□ 0.55
NCKIPSD-201ENST00000294129 AIDAQ96BJ3 306 aa18.5■□□□□ 0.55
NCKIPSD-201ENST00000294129 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 CRKLP46109 303 aaKnown RBP18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 MAGEB6Q8N7X4 407 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 AIFM3Q96NN9 605 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 PUM3Q15397 648 aaKnown RBP18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 CCDC73Q6ZRK6 1079 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 MICU3Q86XE3 530 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 MYL10Q9BUA6 226 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 NBPF3Q9H094 633 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 SENP2Q9HC62 589 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 TOMM22Q9NS69 142 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 SALL1Q9NSC2 1324 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 NUP98P52948 1817 aa18.49■□□□□ 0.55
NCKIPSD-201ENST00000294129 ZNF165P49910 485 aa18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 ZSCAN25Q6NSZ9 544 aa18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 FSIP1Q8NA03 581 aa18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 HPS5Q9UPZ3 1129 aa18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 SF3A1Q15459 793 aaKnown RBP18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 CYB5R4Q7L1T6 521 aa18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 ZNF396Q96N95 335 aaPredicted RBP18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 NHSL1Q5SYE7 1610 aa18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 TRIM5Q9C035 493 aa18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 NIP7Q9Y221 180 aaKnown RBP eCLIP18.48■□□□□ 0.55
NCKIPSD-201ENST00000294129 AKAP11Q9UKA4 1901 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 RASGRF1Q13972 1273 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 TTF1Q15361 905 aaPredicted RBP18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 RRP12Q5JTH9 1297 aaKnown RBP18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 NFXL1Q6ZNB6 911 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 ZNF34Q8IZ26 560 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 ARMT1Q9H993 441 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 CCDC87Q9NVE4 849 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 DISP2A7MBM2 1401 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms