RNA–Protein interactions for RNA: ENST00000293925.9

CRAMP1-201, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-201ENST00000293925 RAPGEF1Q13905 1077 aa18.17■□□□□ 0.5
CRAMP1-201ENST00000293925 SUDS3Q9H7L9 328 aaPredicted RBP18.17■□□□□ 0.5
CRAMP1-201ENST00000293925 UTP11Q9Y3A2 253 aaKnown RBP18.17■□□□□ 0.5
CRAMP1-201ENST00000293925 GOLGA6CA6NDK9 693 aa18.17■□□□□ 0.5
CRAMP1-201ENST00000293925 GOLGA6DP0CG33 693 aa18.17■□□□□ 0.5
CRAMP1-201ENST00000293925 TBC1D31Q96DN5 1066 aa18.17■□□□□ 0.5
CRAMP1-201ENST00000293925 GOLGA6AQ9NYA3 693 aa18.17■□□□□ 0.5
CRAMP1-201ENST00000293925 TRIM27P14373 513 aa18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 Q6ZUG5 572 aa18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 MSANTD4Q8NCY6 345 aa18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 DCAF17Q5H9S7 520 aaPredicted RBP18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 KRT23Q9C075 422 aa18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 VGLL3A8MV65 326 aa18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 USHBP1Q8N6Y0 703 aa18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 CRNKL1Q9BZJ0 848 aaKnown RBP18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 PTPRCP08575 1304 aa18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 PHLDB2Q86SQ0 1253 aa18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 PNMA8AQ86V59 439 aaPredicted RBP18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 CCDC38Q502W7 563 aa18.16■□□□□ 0.5
CRAMP1-201ENST00000293925 NAPAP54920 295 aa18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 KIFC2Q96AC6 838 aa18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 VTI1AQ96AJ9 217 aa18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 LDHCP07864 332 aa18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 UTP14CQ5TAP6 766 aaKnown RBP18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 BAG1Q99933 345 aaPredicted RBP18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 ITIH3Q06033 890 aa18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 DACT3Q96B18 629 aaPredicted RBP18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 SIRT1Q96EB6 747 aa18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 SPTLC2O15270 562 aa18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 CCT6AP40227 531 aaKnown RBP18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 VSIG1Q86XK7 387 aa18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 SMAP1Q8IYB5 467 aaPredicted RBP18.15■□□□□ 0.5
CRAMP1-201ENST00000293925 PPP2R5CQ13362 524 aa18.14■□□□□ 0.5
CRAMP1-201ENST00000293925 RNF10Q8N5U6 811 aaKnown RBP18.14■□□□□ 0.5
CRAMP1-201ENST00000293925 ANKRD24Q8TF21 1146 aa18.14■□□□□ 0.5
CRAMP1-201ENST00000293925 KRT5P13647 590 aa18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 SH2D4BQ5SQS7 431 aa18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 MGEA5O60502 916 aa18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 GIGYF1O75420 1035 aaPredicted RBP18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 PLS1Q14651 629 aa18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 RNF168Q8IYW5 571 aaPredicted RBP18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 C6orf50Q9HD87 102 aa18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 ATP2B3Q16720 1220 aa18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 GIPC1O14908 333 aa18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 F13A1P00488 732 aa18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 NCBP1Q09161 790 aaKnown RBP18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 TSPYL2Q9H2G4 693 aaPredicted RBP18.14■□□□□ 0.49
CRAMP1-201ENST00000293925 HS2ST1Q7LGA3 356 aa18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 STMN1P16949 149 aa18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 PPP1R42Q7Z4L9 355 aa18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 LRRC43Q8N309 656 aa18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 TMTC2Q8N394 836 aa18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 PROCA1Q8NCQ7 364 aaPredicted RBP18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 CSRNP2Q9H175 543 aa18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 ZBTB3Q9H5J0 574 aa18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 FAM204AQ9H8W3 233 aa18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 DBF4Q9UBU7 674 aaPredicted RBP18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 AKR1B15C9JRZ8 316 aaPredicted RBP18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 C8orf74Q6P047 294 aa18.13■□□□□ 0.49
CRAMP1-201ENST00000293925 ATP5J2-PTCD1G3V325 749 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 CETN3O15182 167 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 PRPF31Q8WWY3 499 aaKnown RBP18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 CDC5LQ99459 802 aaKnown RBP18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 KRT9P35527 623 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 ARHGAP24Q8N264 748 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 RSPH3Q86UC2 560 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 ESR2Q92731 530 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 PLEKHH2Q8IVE3 1493 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 TRIM75PA6NK02 468 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 SPOPO43791 374 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 CNGA4Q8IV77 575 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 LRPPRCP42704 1394 aaKnown RBP18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 ACTN4O43707 911 aaKnown RBP18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 PPP2R5DQ14738 602 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 CEP128Q6ZU80 1094 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 PLIN2Q99541 437 aa18.12■□□□□ 0.49
CRAMP1-201ENST00000293925 ATAD2Q6PL18 1390 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 UBE3BQ7Z3V4 1068 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 STK38LQ9Y2H1 464 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 GBP5Q96PP8 586 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 ZBTB21Q9ULJ3 1066 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 SDSP20132 328 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 TAOK1Q7L7X3 1001 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 AFAP1L2Q8N4X5 818 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 RBM8AQ9Y5S9 174 aaKnown RBP18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 CNNM2Q9H8M5 875 aa18.11■□□□□ 0.49
CRAMP1-201ENST00000293925 PPFIA2O75334 1257 aa18.1■□□□□ 0.49
CRAMP1-201ENST00000293925 CUL4BQ13620 913 aa18.1■□□□□ 0.49
CRAMP1-201ENST00000293925 TAF12Q16514 161 aa18.1■□□□□ 0.49
CRAMP1-201ENST00000293925 WHAMMP3Q1A5X7 153 aa18.1■□□□□ 0.49
CRAMP1-201ENST00000293925 JARID2Q92833 1246 aaPredicted RBP18.1■□□□□ 0.49
CRAMP1-201ENST00000293925 SLC4A4Q9Y6R1 1079 aa18.1■□□□□ 0.49
CRAMP1-201ENST00000293925 ERO1AQ96HE7 468 aa18.1■□□□□ 0.49
CRAMP1-201ENST00000293925 KRT2P35908 639 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms